RNA–Protein interactions for RNA: ENST00000581394.1

TTC39C-207, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-207ENST00000581394 ZMAT1Q5H9K5 638 aa6□□□□□ -1.45
TTC39C-207ENST00000581394 LBX2Q6XYB7 198 aa6□□□□□ -1.45
TTC39C-207ENST00000581394 USP53Q70EK8 1073 aa6□□□□□ -1.45
TTC39C-207ENST00000581394 ZNF575Q86XF7 245 aa6□□□□□ -1.45
TTC39C-207ENST00000581394 FAM89AQ96GI7 184 aa6□□□□□ -1.45
TTC39C-207ENST00000581394 ZFYVE21Q9BQ24 234 aa6□□□□□ -1.45
TTC39C-207ENST00000581394 IER2Q9BTL4 223 aa6□□□□□ -1.45
TTC39C-207ENST00000581394 MSL2Q9HCI7 577 aa6□□□□□ -1.45
TTC39C-207ENST00000581394 MRVI1Q9Y6F6 885 aa6□□□□□ -1.45
TTC39C-207ENST00000581394 ACOT7O00154 380 aa5.99□□□□□ -1.45
TTC39C-207ENST00000581394 NKRFO15226 690 aaKnown RBP eCLIP5.99□□□□□ -1.45
TTC39C-207ENST00000581394 COL6A2P12110 1019 aa5.99□□□□□ -1.45
TTC39C-207ENST00000581394 INHBCP55103 352 aa5.99□□□□□ -1.45
TTC39C-207ENST00000581394 DGCR2P98153 550 aa5.99□□□□□ -1.45
TTC39C-207ENST00000581394 KCTD1Q719H9 257 aa5.99□□□□□ -1.45
TTC39C-207ENST00000581394 C1orf210Q8IVY1 113 aa5.99□□□□□ -1.45
TTC39C-207ENST00000581394 CACTINQ8WUQ7 758 aaKnown RBP5.99□□□□□ -1.45
TTC39C-207ENST00000581394 DCAF4Q8WV16 495 aa5.99□□□□□ -1.45
TTC39C-207ENST00000581394 SCYL1Q96KG9 808 aa5.99□□□□□ -1.45
TTC39C-207ENST00000581394 DSEQ9UL01 958 aa5.99□□□□□ -1.45
TTC39C-207ENST00000581394 SSBP05455 408 aaKnown RBP eCLIP5.98□□□□□ -1.45
TTC39C-207ENST00000581394 ACRV1P26436 265 aa5.98□□□□□ -1.45
TTC39C-207ENST00000581394 NFYCQ13952 458 aa5.98□□□□□ -1.45
TTC39C-207ENST00000581394 DPP8Q6V1X1 898 aaPredicted RBP5.98□□□□□ -1.45
TTC39C-207ENST00000581394 IL17DQ8TAD2 202 aa5.98□□□□□ -1.45
TTC39C-207ENST00000581394 CCSER2Q9H7U1 834 aa5.98□□□□□ -1.45
TTC39C-207ENST00000581394 MATN2O00339 956 aa5.97□□□□□ -1.45
TTC39C-207ENST00000581394 GJB6O95452 261 aa5.97□□□□□ -1.45
TTC39C-207ENST00000581394 C1SP09871 688 aa5.97□□□□□ -1.45
TTC39C-207ENST00000581394 TGM1P22735 817 aa5.97□□□□□ -1.45
TTC39C-207ENST00000581394 ETV4P43268 484 aa5.97□□□□□ -1.45
TTC39C-207ENST00000581394 DPYSL5Q9BPU6 564 aa5.97□□□□□ -1.45
TTC39C-207ENST00000581394 A0A087X1B8 175 aa5.96□□□□□ -1.46
TTC39C-207ENST00000581394 ESYT3A0FGR9 886 aa5.96□□□□□ -1.46
TTC39C-207ENST00000581394 U2SURPO15042 1029 aaKnown RBP5.96□□□□□ -1.46
TTC39C-207ENST00000581394 CDC14BO60729 498 aa5.96□□□□□ -1.46
TTC39C-207ENST00000581394 RPS19P39019 145 aaKnown RBP5.96□□□□□ -1.46
TTC39C-207ENST00000581394 MFAP1P55081 439 aaKnown RBP5.96□□□□□ -1.46
TTC39C-207ENST00000581394 GPR85P60893 370 aa5.96□□□□□ -1.46
TTC39C-207ENST00000581394 DBPQ10586 325 aaPredicted RBP5.96□□□□□ -1.46
TTC39C-207ENST00000581394 OR14A2Q96R54 314 aa5.96□□□□□ -1.46
TTC39C-207ENST00000581394 KCNJ15Q99712 375 aa5.96□□□□□ -1.46
TTC39C-207ENST00000581394 PLA2G12BQ9BX93 195 aa5.96□□□□□ -1.46
TTC39C-207ENST00000581394 CAPN10Q9HC96 672 aa5.96□□□□□ -1.46
TTC39C-207ENST00000581394 SLC39A2Q9NP94 309 aa5.96□□□□□ -1.46
TTC39C-207ENST00000581394 NR2E1Q9Y466 385 aa5.96□□□□□ -1.46
TTC39C-207ENST00000581394 SOD2P04179 222 aa5.95□□□□□ -1.46
TTC39C-207ENST00000581394 ETFBP38117 255 aa5.95□□□□□ -1.46
TTC39C-207ENST00000581394 HSP90AA2PQ14568 343 aaPredicted RBP5.95□□□□□ -1.46
TTC39C-207ENST00000581394 KCNT2Q6UVM3 1135 aa5.95□□□□□ -1.46
TTC39C-207ENST00000581394 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.95□□□□□ -1.46
TTC39C-207ENST00000581394 NEU4Q8WWR8 484 aaPredicted RBP5.95□□□□□ -1.46
TTC39C-207ENST00000581394 MRRFQ96E11 262 aaKnown RBP5.95□□□□□ -1.46
TTC39C-207ENST00000581394 SGSM3Q96HU1 749 aa5.95□□□□□ -1.46
TTC39C-207ENST00000581394 PLEKHG4BQ96PX9 1271 aa5.95□□□□□ -1.46
TTC39C-207ENST00000581394 ZDHHC5Q9C0B5 715 aa5.95□□□□□ -1.46
TTC39C-207ENST00000581394 ZNF703Q9H7S9 590 aaPredicted RBP5.95□□□□□ -1.46
TTC39C-207ENST00000581394 FAM47E-STBD1D6RA91 191 aa5.94□□□□□ -1.46
TTC39C-207ENST00000581394 ARHGAP6O43182 974 aa5.94□□□□□ -1.46
TTC39C-207ENST00000581394 RRADP55042 308 aa5.94□□□□□ -1.46
TTC39C-207ENST00000581394 NANOS3P60323 173 aaKnown RBP5.94□□□□□ -1.46
TTC39C-207ENST00000581394 TUBA3CQ13748 450 aa5.94□□□□□ -1.46
TTC39C-207ENST00000581394 NOLC1Q14978 699 aaKnown RBP eCLIP5.94□□□□□ -1.46
TTC39C-207ENST00000581394 NTRK3Q16288 839 aa5.94□□□□□ -1.46
TTC39C-207ENST00000581394 FNDC7Q5VTL7 733 aa5.94□□□□□ -1.46
TTC39C-207ENST00000581394 STYK1Q6J9G0 422 aa5.94□□□□□ -1.46
TTC39C-207ENST00000581394 TUBA3EQ6PEY2 450 aa5.94□□□□□ -1.46
TTC39C-207ENST00000581394 VPS37DQ86XT2 251 aa5.94□□□□□ -1.46
TTC39C-207ENST00000581394 LDLRAD3Q86YD5 345 aa5.94□□□□□ -1.46
TTC39C-207ENST00000581394 IFNL3Q8IZI9 196 aa5.94□□□□□ -1.46
TTC39C-207ENST00000581394 ZNF808Q8N4W9 903 aaPredicted RBP5.94□□□□□ -1.46
TTC39C-207ENST00000581394 SH3RF2Q8TEC5 729 aa5.94□□□□□ -1.46
TTC39C-207ENST00000581394 CFHR4Q92496 578 aa5.94□□□□□ -1.46
TTC39C-207ENST00000581394 AURKAIP1Q9NWT8 199 aaPredicted RBP5.94□□□□□ -1.46
TTC39C-207ENST00000581394 FGFR1P11362 822 aa5.93□□□□□ -1.46
TTC39C-207ENST00000581394 TBR1Q16650 682 aa5.93□□□□□ -1.46
TTC39C-207ENST00000581394 KRTAP15-1Q3LI76 137 aa5.93□□□□□ -1.46
TTC39C-207ENST00000581394 CXXC5Q7LFL8 322 aaKnown RBP5.93□□□□□ -1.46
TTC39C-207ENST00000581394 AARSD1Q9BTE6 412 aaKnown RBP5.93□□□□□ -1.46
TTC39C-207ENST00000581394 C12orf65Q9H3J6 166 aaKnown RBP5.93□□□□□ -1.46
TTC39C-207ENST00000581394 PUF60Q9UHX1 559 aaKnown RBP5.93□□□□□ -1.46
TTC39C-207ENST00000581394 FBXO10Q9UK96 956 aa5.93□□□□□ -1.46
TTC39C-207ENST00000581394 ADH4P08319 380 aa5.92□□□□□ -1.46
TTC39C-207ENST00000581394 DNAJA1P31689 397 aaKnown RBP5.92□□□□□ -1.46
TTC39C-207ENST00000581394 FOXL1Q12952 345 aa5.92□□□□□ -1.46
TTC39C-207ENST00000581394 WDR72Q3MJ13 1102 aa5.92□□□□□ -1.46
TTC39C-207ENST00000581394 CD244Q9BZW8 370 aa5.92□□□□□ -1.46
TTC39C-207ENST00000581394 IPPKQ9H8X2 491 aa5.92□□□□□ -1.46
TTC39C-207ENST00000581394 TCRBV5S4A2TA0A5A2 114 aa5.91□□□□□ -1.46
TTC39C-207ENST00000581394 PRODHO43272 600 aa5.91□□□□□ -1.46
TTC39C-207ENST00000581394 HMGCRP04035 888 aa5.91□□□□□ -1.46
TTC39C-207ENST00000581394 MAKP20794 623 aa5.91□□□□□ -1.46
TTC39C-207ENST00000581394 BTBD8Q5XKL5 378 aa5.91□□□□□ -1.46
TTC39C-207ENST00000581394 USP30Q70CQ3 517 aa5.91□□□□□ -1.46
TTC39C-207ENST00000581394 NLGN4XQ8N0W4 816 aa5.91□□□□□ -1.46
TTC39C-207ENST00000581394 ZNF483Q8TF39 744 aaPredicted RBP5.91□□□□□ -1.46
TTC39C-207ENST00000581394 LARP4BQ92615 738 aaKnown RBP5.91□□□□□ -1.46
TTC39C-207ENST00000581394 OSBP2Q969R2 916 aa5.91□□□□□ -1.46
TTC39C-207ENST00000581394 MMRN2Q9H8L6 949 aa5.91□□□□□ -1.46
TTC39C-207ENST00000581394 TLR9Q9NR96 1032 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms