RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 TDP2O95551 362 aa12.34□□□□□ -0.43
NDEL1-208ENST00000580237 DNAJB2P25686 324 aa12.34□□□□□ -0.43
NDEL1-208ENST00000580237 CIITAP33076 1130 aa12.34□□□□□ -0.43
NDEL1-208ENST00000580237 KRT2P35908 639 aa12.34□□□□□ -0.43
NDEL1-208ENST00000580237 USP11P51784 963 aa12.34□□□□□ -0.43
NDEL1-208ENST00000580237 HIC1Q14526 733 aa12.34□□□□□ -0.43
NDEL1-208ENST00000580237 RABEP1Q15276 862 aa12.34□□□□□ -0.43
NDEL1-208ENST00000580237 ZNF618Q5T7W0 954 aa12.34□□□□□ -0.43
NDEL1-208ENST00000580237 LRCH2Q5VUJ6 765 aa12.34□□□□□ -0.43
NDEL1-208ENST00000580237 TAF2Q6P1X5 1199 aa12.34□□□□□ -0.43
NDEL1-208ENST00000580237 RSPH3Q86UC2 560 aa12.34□□□□□ -0.43
NDEL1-208ENST00000580237 SMAP1Q8IYB5 467 aaPredicted RBP12.34□□□□□ -0.43
NDEL1-208ENST00000580237 NSUN7Q8NE18 718 aaKnown RBP12.34□□□□□ -0.43
NDEL1-208ENST00000580237 WNT8BQ93098 351 aa12.34□□□□□ -0.43
NDEL1-208ENST00000580237 TEKT3Q9BXF9 490 aa12.34□□□□□ -0.43
NDEL1-208ENST00000580237 ZNF302Q9NR11 478 aa12.34□□□□□ -0.43
NDEL1-208ENST00000580237 GJB4Q9NTQ9 266 aa12.34□□□□□ -0.43
NDEL1-208ENST00000580237 CXXC1Q9P0U4 656 aaPredicted RBP12.34□□□□□ -0.43
NDEL1-208ENST00000580237 MSRAQ9UJ68 235 aa12.34□□□□□ -0.43
NDEL1-208ENST00000580237 LAMA3Q16787 3333 aa12.33□□□□□ -0.44
NDEL1-208ENST00000580237 WDR64B1ANS9 1081 aa12.33□□□□□ -0.44
NDEL1-208ENST00000580237 RSPH10B2B2RC85 870 aa12.33□□□□□ -0.44
NDEL1-208ENST00000580237 MARCH6O60337 910 aa12.33□□□□□ -0.44
NDEL1-208ENST00000580237 CAND2O75155 1236 aa12.33□□□□□ -0.44
NDEL1-208ENST00000580237 BAIAP3O94812 1187 aa12.33□□□□□ -0.44
NDEL1-208ENST00000580237 CCNE2O96020 404 aa12.33□□□□□ -0.44
NDEL1-208ENST00000580237 PSAPP07602 524 aa12.33□□□□□ -0.44
NDEL1-208ENST00000580237 RSPH10BP0C881 870 aa12.33□□□□□ -0.44
NDEL1-208ENST00000580237 ATP2A2P16615 1042 aaKnown RBP12.33□□□□□ -0.44
NDEL1-208ENST00000580237 HOXC8P31273 242 aa12.33□□□□□ -0.44
NDEL1-208ENST00000580237 RBM25P49756 843 aaKnown RBP12.33□□□□□ -0.44
NDEL1-208ENST00000580237 SLC26A2P50443 739 aa12.33□□□□□ -0.44
NDEL1-208ENST00000580237 RAB30Q15771 203 aa12.33□□□□□ -0.44
NDEL1-208ENST00000580237 TRIM71Q2Q1W2 868 aaKnown RBP12.33□□□□□ -0.44
NDEL1-208ENST00000580237 LETM2Q2VYF4 491 aa12.33□□□□□ -0.44
NDEL1-208ENST00000580237 FAM109BQ6ICB4 259 aaPredicted RBP12.33□□□□□ -0.44
NDEL1-208ENST00000580237 ZNF746Q6NUN9 644 aaPredicted RBP12.33□□□□□ -0.44
NDEL1-208ENST00000580237 PDXDC2PQ6P474 469 aa12.33□□□□□ -0.44
NDEL1-208ENST00000580237 PIK3AP1Q6ZUJ8 805 aa12.33□□□□□ -0.44
NDEL1-208ENST00000580237 PLPPR4Q7Z2D5 763 aa12.33□□□□□ -0.44
NDEL1-208ENST00000580237 NEK8Q86SG6 692 aa12.33□□□□□ -0.44
NDEL1-208ENST00000580237 CCDC60Q8IWA6 550 aaPredicted RBP12.33□□□□□ -0.44
NDEL1-208ENST00000580237 TIFAQ96CG3 184 aa12.33□□□□□ -0.44
NDEL1-208ENST00000580237 ZSCAN31Q96LW9 406 aaPredicted RBP12.33□□□□□ -0.44
NDEL1-208ENST00000580237 SH2B1Q9NRF2 756 aaPredicted RBP12.33□□□□□ -0.44
NDEL1-208ENST00000580237 DDX25Q9UHL0 483 aaKnown RBP12.33□□□□□ -0.44
NDEL1-208ENST00000580237 TMEM265A0A087WTH1 108 aa12.32□□□□□ -0.44
NDEL1-208ENST00000580237 POTEB3A0JP26 581 aa12.32□□□□□ -0.44
NDEL1-208ENST00000580237 RRN3P2A6NIE6 340 aa12.32□□□□□ -0.44
NDEL1-208ENST00000580237 GRXCR1A8MXD5 290 aa12.32□□□□□ -0.44
NDEL1-208ENST00000580237 M0QZ92 97 aa12.32□□□□□ -0.44
NDEL1-208ENST00000580237 MSH4O15457 936 aa12.32□□□□□ -0.44
NDEL1-208ENST00000580237 INSRRP14616 1297 aa12.32□□□□□ -0.44
NDEL1-208ENST00000580237 GCFC2P16383 781 aaKnown RBP12.32□□□□□ -0.44
NDEL1-208ENST00000580237 PLCB4Q15147 1175 aa12.32□□□□□ -0.44
NDEL1-208ENST00000580237 SAFBQ15424 915 aaKnown RBP eCLIP12.32□□□□□ -0.44
NDEL1-208ENST00000580237 NPY5RQ15761 445 aa12.32□□□□□ -0.44
NDEL1-208ENST00000580237 RASIP1Q5U651 963 aa12.32□□□□□ -0.44
NDEL1-208ENST00000580237 SWSAP1Q6NVH7 229 aa12.32□□□□□ -0.44
NDEL1-208ENST00000580237 CNKSR3Q6P9H4 555 aa12.32□□□□□ -0.44
NDEL1-208ENST00000580237 POTEBQ6S5H4 581 aa12.32□□□□□ -0.44
NDEL1-208ENST00000580237 MOXD1Q6UVY6 613 aa12.32□□□□□ -0.44
NDEL1-208ENST00000580237 TRMT1LQ7Z2T5 733 aaKnown RBP12.32□□□□□ -0.44
NDEL1-208ENST00000580237 FAM184AQ8NB25 1140 aa12.32□□□□□ -0.44
NDEL1-208ENST00000580237 LENG9Q96B70 501 aa12.32□□□□□ -0.44
NDEL1-208ENST00000580237 SLC9A7Q96T83 725 aa12.32□□□□□ -0.44
NDEL1-208ENST00000580237 PCYT2Q99447 389 aa12.32□□□□□ -0.44
NDEL1-208ENST00000580237 NAP1L4Q99733 375 aaKnown RBP12.32□□□□□ -0.44
NDEL1-208ENST00000580237 FAM49AQ9H0Q0 323 aaPredicted RBP12.32□□□□□ -0.44
NDEL1-208ENST00000580237 M0R2N6 131 aa12.31□□□□□ -0.44
NDEL1-208ENST00000580237 DHX15O43143 795 aaKnown RBP12.31□□□□□ -0.44
NDEL1-208ENST00000580237 CCNT1O60563 726 aaKnown RBP12.31□□□□□ -0.44
NDEL1-208ENST00000580237 NBNO60934 754 aa12.31□□□□□ -0.44
NDEL1-208ENST00000580237 RPLP2P05387 115 aaKnown RBP12.31□□□□□ -0.44
NDEL1-208ENST00000580237 FDPSP14324 419 aaKnown RBP12.31□□□□□ -0.44
NDEL1-208ENST00000580237 JAK3P52333 1124 aa12.31□□□□□ -0.44
NDEL1-208ENST00000580237 HMGN5P82970 282 aaKnown RBP12.31□□□□□ -0.44
NDEL1-208ENST00000580237 GNL2Q13823 731 aaKnown RBP12.31□□□□□ -0.44
NDEL1-208ENST00000580237 Q4G0T1 1027 aa12.31□□□□□ -0.44
NDEL1-208ENST00000580237 ABHD15Q6UXT9 468 aa12.31□□□□□ -0.44
NDEL1-208ENST00000580237 RUFY4Q6ZNE9 571 aa12.31□□□□□ -0.44
NDEL1-208ENST00000580237 OXER1Q8TDS5 423 aa12.31□□□□□ -0.44
NDEL1-208ENST00000580237 ATP8B4Q8TF62 1192 aa12.31□□□□□ -0.44
NDEL1-208ENST00000580237 TRAPPC12Q8WVT3 735 aa12.31□□□□□ -0.44
NDEL1-208ENST00000580237 RIT2Q99578 217 aa12.31□□□□□ -0.44
NDEL1-208ENST00000580237 KIF2CQ99661 725 aa12.31□□□□□ -0.44
NDEL1-208ENST00000580237 LLPHQ9BRT6 129 aaKnown RBP12.31□□□□□ -0.44
NDEL1-208ENST00000580237 PBX4Q9BYU1 374 aa12.31□□□□□ -0.44
NDEL1-208ENST00000580237 DISC1Q9NRI5 854 aa12.31□□□□□ -0.44
NDEL1-208ENST00000580237 GABBR1Q9UBS5 961 aa12.31□□□□□ -0.44
NDEL1-208ENST00000580237 PCDHA10Q9Y5I2 948 aa12.31□□□□□ -0.44
NDEL1-208ENST00000580237 COL1A2P08123 1366 aa12.3□□□□□ -0.44
NDEL1-208ENST00000580237 ARID2Q68CP9 1835 aa12.3□□□□□ -0.44
NDEL1-208ENST00000580237 HBP1O60381 514 aa12.3□□□□□ -0.44
NDEL1-208ENST00000580237 EFCAB14O75071 495 aa12.3□□□□□ -0.44
NDEL1-208ENST00000580237 ATG7O95352 703 aa12.3□□□□□ -0.44
NDEL1-208ENST00000580237 CXCL10P02778 98 aa12.3□□□□□ -0.44
NDEL1-208ENST00000580237 MMP1P03956 469 aa12.3□□□□□ -0.44
NDEL1-208ENST00000580237 SFNP31947 248 aa12.3□□□□□ -0.44
NDEL1-208ENST00000580237 PBX2P40425 430 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms