RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 GHRHRQ02643 423 aa22.32■■□□□ 1.16
LIMD2-209ENST00000580222 LPIN1Q14693 890 aa22.32■■□□□ 1.16
LIMD2-209ENST00000580222 NCOA7Q8NI08 942 aa22.32■■□□□ 1.16
LIMD2-209ENST00000580222 LINC01599Q8WXQ3 324 aa22.32■■□□□ 1.16
LIMD2-209ENST00000580222 RWDD3Q9Y3V2 267 aa22.32■■□□□ 1.16
LIMD2-209ENST00000580222 KMT2EQ8IZD2 1858 aa22.32■■□□□ 1.16
LIMD2-209ENST00000580222 B4E1Z4 1266 aa22.31■■□□□ 1.16
LIMD2-209ENST00000580222 DGKIO75912 1065 aa22.31■■□□□ 1.16
LIMD2-209ENST00000580222 FOXK2Q01167 660 aa22.31■■□□□ 1.16
LIMD2-209ENST00000580222 KRT32Q14532 448 aa22.31■■□□□ 1.16
LIMD2-209ENST00000580222 KCNV1Q6PIU1 500 aa22.31■■□□□ 1.16
LIMD2-209ENST00000580222 DGKHQ86XP1 1220 aa22.31■■□□□ 1.16
LIMD2-209ENST00000580222 LMBR1Q8WVP7 490 aa22.31■■□□□ 1.16
LIMD2-209ENST00000580222 PLVAPQ9BX97 442 aa22.31■■□□□ 1.16
LIMD2-209ENST00000580222 BACH2Q9BYV9 841 aa22.31■■□□□ 1.16
LIMD2-209ENST00000580222 RALGAPA2Q2PPJ7 1873 aa22.3■■□□□ 1.16
LIMD2-209ENST00000580222 RIF1Q5UIP0 2472 aaKnown RBP22.3■■□□□ 1.16
LIMD2-209ENST00000580222 KDM4AO75164 1064 aa22.3■■□□□ 1.16
LIMD2-209ENST00000580222 TGFB3P10600 412 aa22.3■■□□□ 1.16
LIMD2-209ENST00000580222 NT5C2P49902 561 aa22.3■■□□□ 1.16
LIMD2-209ENST00000580222 ARHGAP4P98171 946 aa22.3■■□□□ 1.16
LIMD2-209ENST00000580222 MGAT3Q09327 533 aa22.3■■□□□ 1.16
LIMD2-209ENST00000580222 RTN4RL1Q86UN2 441 aaPredicted RBP22.3■■□□□ 1.16
LIMD2-209ENST00000580222 RASEFQ8IZ41 740 aa22.3■■□□□ 1.16
LIMD2-209ENST00000580222 CRIPAKQ8N1N5 446 aa22.3■■□□□ 1.16
LIMD2-209ENST00000580222 KLHL23Q8NBE8 558 aa22.3■■□□□ 1.16
LIMD2-209ENST00000580222 VN1R2Q8NFZ6 395 aa22.3■■□□□ 1.16
LIMD2-209ENST00000580222 PHF7Q9BWX1 381 aaPredicted RBP22.3■■□□□ 1.16
LIMD2-209ENST00000580222 SNX14Q9Y5W7 946 aa22.3■■□□□ 1.16
LIMD2-209ENST00000580222 SEMA3FQ13275 785 aa22.29■■□□□ 1.16
LIMD2-209ENST00000580222 STAG2Q8N3U4 1231 aa22.29■■□□□ 1.16
LIMD2-209ENST00000580222 KCNB2Q92953 911 aa22.29■■□□□ 1.16
LIMD2-209ENST00000580222 P2RX5Q93086 422 aa22.29■■□□□ 1.16
LIMD2-209ENST00000580222 GPR20Q99678 358 aa22.29■■□□□ 1.16
LIMD2-209ENST00000580222 MYH7BA7E2Y1 1941 aa22.28■■□□□ 1.16
LIMD2-209ENST00000580222 PROB1E7EW31 1015 aa22.28■■□□□ 1.16
LIMD2-209ENST00000580222 DHX16O60231 1041 aaKnown RBP22.28■■□□□ 1.16
LIMD2-209ENST00000580222 SLC35G1Q2M3R5 365 aa22.28■■□□□ 1.16
LIMD2-209ENST00000580222 TSGA10IPQ3SY00 556 aa22.28■■□□□ 1.16
LIMD2-209ENST00000580222 POF1BQ8WVV4 589 aa22.28■■□□□ 1.16
LIMD2-209ENST00000580222 PER2O15055 1255 aa22.27■■□□□ 1.16
LIMD2-209ENST00000580222 ICAM3P32942 547 aa22.27■■□□□ 1.16
LIMD2-209ENST00000580222 GATMP50440 423 aa22.27■■□□□ 1.16
LIMD2-209ENST00000580222 MRPS9P82933 396 aaKnown RBP22.27■■□□□ 1.16
LIMD2-209ENST00000580222 ASPRV1Q53RT3 343 aa22.27■■□□□ 1.16
LIMD2-209ENST00000580222 UTP14CQ5TAP6 766 aaKnown RBP22.27■■□□□ 1.16
LIMD2-209ENST00000580222 CYFIP1Q7L576 1253 aa22.27■■□□□ 1.16
LIMD2-209ENST00000580222 SUSD6Q92537 303 aa22.27■■□□□ 1.16
LIMD2-209ENST00000580222 AGO3Q9H9G7 860 aaKnown RBP22.27■■□□□ 1.16
LIMD2-209ENST00000580222 GNAT1P11488 350 aa22.26■■□□□ 1.15
LIMD2-209ENST00000580222 PTPN21Q16825 1174 aa22.26■■□□□ 1.15
LIMD2-209ENST00000580222 ADCK5Q3MIX3 580 aa22.26■■□□□ 1.15
LIMD2-209ENST00000580222 PAN2Q504Q3 1202 aaKnown RBP22.26■■□□□ 1.15
LIMD2-209ENST00000580222 FBXO47Q5MNV8 452 aa22.26■■□□□ 1.15
LIMD2-209ENST00000580222 IQCA1Q86XH1 822 aa22.26■■□□□ 1.15
LIMD2-209ENST00000580222 MB21D2Q8IYB1 491 aaPredicted RBP22.26■■□□□ 1.15
LIMD2-209ENST00000580222 ZBTB10Q96DT7 871 aa22.26■■□□□ 1.15
LIMD2-209ENST00000580222 JAKMIP1Q96N16 626 aaKnown RBP22.26■■□□□ 1.15
LIMD2-209ENST00000580222 NEK1Q96PY6 1258 aa22.26■■□□□ 1.15
LIMD2-209ENST00000580222 AMNQ9BXJ7 453 aa22.26■■□□□ 1.15
LIMD2-209ENST00000580222 KAT14Q9H8E8 782 aa22.26■■□□□ 1.15
LIMD2-209ENST00000580222 PLXNA3P51805 1871 aa22.26■■□□□ 1.15
LIMD2-209ENST00000580222 NOP56O00567 594 aaKnown RBP22.25■■□□□ 1.15
LIMD2-209ENST00000580222 PPFIA3O75145 1194 aa22.25■■□□□ 1.15
LIMD2-209ENST00000580222 CCND2P30279 289 aa22.25■■□□□ 1.15
LIMD2-209ENST00000580222 CYB5R4Q7L1T6 521 aa22.25■■□□□ 1.15
LIMD2-209ENST00000580222 FCHSD1Q86WN1 690 aa22.25■■□□□ 1.15
LIMD2-209ENST00000580222 ENAHQ8N8S7 591 aaPredicted RBP22.25■■□□□ 1.15
LIMD2-209ENST00000580222 ATP8B4Q8TF62 1192 aa22.25■■□□□ 1.15
LIMD2-209ENST00000580222 MTMR8Q96EF0 704 aa22.25■■□□□ 1.15
LIMD2-209ENST00000580222 UBAC1Q9BSL1 405 aa22.25■■□□□ 1.15
LIMD2-209ENST00000580222 C22orf23Q9BZE7 217 aa22.25■■□□□ 1.15
LIMD2-209ENST00000580222 ZSWIM5Q9P217 1185 aa22.25■■□□□ 1.15
LIMD2-209ENST00000580222 PCDHA1Q9Y5I3 950 aa22.25■■□□□ 1.15
LIMD2-209ENST00000580222 PRR23AA6NEV1 266 aa22.24■■□□□ 1.15
LIMD2-209ENST00000580222 SPATA31C2B4DYI2 1134 aa22.24■■□□□ 1.15
LIMD2-209ENST00000580222 PARP1P09874 1014 aaKnown RBP22.24■■□□□ 1.15
LIMD2-209ENST00000580222 PSMA5P28066 241 aa22.24■■□□□ 1.15
LIMD2-209ENST00000580222 ANAPC15P60006 121 aa22.24■■□□□ 1.15
LIMD2-209ENST00000580222 METTL7BQ6UX53 244 aa22.24■■□□□ 1.15
LIMD2-209ENST00000580222 RTEL1Q9NZ71 1219 aa22.24■■□□□ 1.15
LIMD2-209ENST00000580222 GALR2O43603 387 aaPredicted RBP22.23■■□□□ 1.15
LIMD2-209ENST00000580222 CD52P31358 61 aa22.23■■□□□ 1.15
LIMD2-209ENST00000580222 MCM5P33992 734 aa22.23■■□□□ 1.15
LIMD2-209ENST00000580222 SP4Q02446 784 aa22.23■■□□□ 1.15
LIMD2-209ENST00000580222 NAALADL2Q58DX5 795 aa22.23■■□□□ 1.15
LIMD2-209ENST00000580222 CCDC178Q5BJE1 867 aa22.23■■□□□ 1.15
LIMD2-209ENST00000580222 CMTR2Q8IYT2 770 aaKnown RBP22.23■■□□□ 1.15
LIMD2-209ENST00000580222 DNAJB3Q8WWF6 145 aa22.23■■□□□ 1.15
LIMD2-209ENST00000580222 PPP2R3CQ969Q6 453 aa22.23■■□□□ 1.15
LIMD2-209ENST00000580222 RIPOR3Q96MK2 946 aa22.23■■□□□ 1.15
LIMD2-209ENST00000580222 INPP4AQ96PE3 977 aaPredicted RBP22.23■■□□□ 1.15
LIMD2-209ENST00000580222 ZSCAN10Q96SZ4 725 aaPredicted RBP22.23■■□□□ 1.15
LIMD2-209ENST00000580222 TLE6Q9H808 572 aa22.23■■□□□ 1.15
LIMD2-209ENST00000580222 TRPC6Q9Y210 931 aa22.23■■□□□ 1.15
LIMD2-209ENST00000580222 ERICH2A1L162 156 aa22.22■■□□□ 1.15
LIMD2-209ENST00000580222 PRC1O43663 620 aa22.22■■□□□ 1.15
LIMD2-209ENST00000580222 HMGB1P09429 215 aaKnown RBP22.22■■□□□ 1.15
LIMD2-209ENST00000580222 ATF7P17544 494 aaPredicted RBP22.22■■□□□ 1.15
LIMD2-209ENST00000580222 SART3Q15020 963 aaKnown RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms