RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 GHRHRQ02643 423 aa10.78□□□□□ -0.68
SMARCD2-208ENST00000580054 SEMA3FQ13275 785 aa10.78□□□□□ -0.68
SMARCD2-208ENST00000580054 FBXO47Q5MNV8 452 aa10.78□□□□□ -0.68
SMARCD2-208ENST00000580054 KCNV1Q6PIU1 500 aa10.78□□□□□ -0.68
SMARCD2-208ENST00000580054 RTN4RL1Q86UN2 441 aaPredicted RBP10.78□□□□□ -0.68
SMARCD2-208ENST00000580054 VSIG10LQ86VR7 867 aa10.78□□□□□ -0.68
SMARCD2-208ENST00000580054 CRIPAKQ8N1N5 446 aa10.78□□□□□ -0.68
SMARCD2-208ENST00000580054 KREMEN2Q8NCW0 462 aa10.78□□□□□ -0.68
SMARCD2-208ENST00000580054 PNMA1Q8ND90 353 aa10.78□□□□□ -0.68
SMARCD2-208ENST00000580054 NKD2Q969F2 451 aaPredicted RBP10.78□□□□□ -0.68
SMARCD2-208ENST00000580054 EVI5LQ96CN4 794 aa10.78□□□□□ -0.68
SMARCD2-208ENST00000580054 ZBTB10Q96DT7 871 aa10.78□□□□□ -0.68
SMARCD2-208ENST00000580054 GPR20Q99678 358 aa10.78□□□□□ -0.68
SMARCD2-208ENST00000580054 AGO3Q9H9G7 860 aaKnown RBP10.78□□□□□ -0.68
SMARCD2-208ENST00000580054 PPP4R2Q9NY27 417 aa10.78□□□□□ -0.68
SMARCD2-208ENST00000580054 HCSTQ9UBK5 93 aa10.78□□□□□ -0.68
SMARCD2-208ENST00000580054 ZBTB47Q9UFB7 747 aaPredicted RBP10.78□□□□□ -0.68
SMARCD2-208ENST00000580054 SPTBN2O15020 2390 aa10.78□□□□□ -0.68
SMARCD2-208ENST00000580054 GNAT1P11488 350 aa10.77□□□□□ -0.69
SMARCD2-208ENST00000580054 IBSPP21815 317 aaPredicted RBP10.77□□□□□ -0.69
SMARCD2-208ENST00000580054 CCND2P30279 289 aa10.77□□□□□ -0.69
SMARCD2-208ENST00000580054 CD52P31358 61 aa10.77□□□□□ -0.69
SMARCD2-208ENST00000580054 DUSP6Q16828 381 aa10.77□□□□□ -0.69
SMARCD2-208ENST00000580054 MCMDC2Q4G0Z9 681 aa10.77□□□□□ -0.69
SMARCD2-208ENST00000580054 NAALADL2Q58DX5 795 aa10.77□□□□□ -0.69
SMARCD2-208ENST00000580054 ANKRD45Q5TZF3 282 aa10.77□□□□□ -0.69
SMARCD2-208ENST00000580054 TSHZ1Q6ZSZ6 1077 aa10.77□□□□□ -0.69
SMARCD2-208ENST00000580054 STOX1Q6ZVD7 989 aa10.77□□□□□ -0.69
SMARCD2-208ENST00000580054 CYFIP1Q7L576 1253 aa10.77□□□□□ -0.69
SMARCD2-208ENST00000580054 ZNF589Q86UQ0 364 aaPredicted RBP10.77□□□□□ -0.69
SMARCD2-208ENST00000580054 NPAS4Q8IUM7 802 aa10.77□□□□□ -0.69
SMARCD2-208ENST00000580054 EXOC6Q8TAG9 804 aa10.77□□□□□ -0.69
SMARCD2-208ENST00000580054 FAM227BQ96M60 508 aa10.77□□□□□ -0.69
SMARCD2-208ENST00000580054 NEK1Q96PY6 1258 aa10.77□□□□□ -0.69
SMARCD2-208ENST00000580054 USP26Q9BXU7 913 aa10.77□□□□□ -0.69
SMARCD2-208ENST00000580054 S1PR5Q9H228 398 aa10.77□□□□□ -0.69
SMARCD2-208ENST00000580054 TSHZ2Q9NRE2 1034 aa10.77□□□□□ -0.69
SMARCD2-208ENST00000580054 CDY2AQ9Y6F7 541 aa10.77□□□□□ -0.69
SMARCD2-208ENST00000580054 ZMYM6O95789 1325 aa10.77□□□□□ -0.69
SMARCD2-208ENST00000580054 KMT2BQ9UMN6 2715 aaPredicted RBP10.77□□□□□ -0.69
SMARCD2-208ENST00000580054 KRT37O76014 449 aa10.76□□□□□ -0.69
SMARCD2-208ENST00000580054 TGFB3P10600 412 aa10.76□□□□□ -0.69
SMARCD2-208ENST00000580054 TECP42680 631 aa10.76□□□□□ -0.69
SMARCD2-208ENST00000580054 ERVFC1P60507 584 aa10.76□□□□□ -0.69
SMARCD2-208ENST00000580054 MRPS9P82933 396 aaKnown RBP10.76□□□□□ -0.69
SMARCD2-208ENST00000580054 ASPRV1Q53RT3 343 aa10.76□□□□□ -0.69
SMARCD2-208ENST00000580054 LLGL2Q6P1M3 1020 aa10.76□□□□□ -0.69
SMARCD2-208ENST00000580054 SYCE2Q6PIF2 218 aa10.76□□□□□ -0.69
SMARCD2-208ENST00000580054 METTL7BQ6UX53 244 aa10.76□□□□□ -0.69
SMARCD2-208ENST00000580054 MFSD6Q6ZSS7 791 aa10.76□□□□□ -0.69
SMARCD2-208ENST00000580054 FCHSD1Q86WN1 690 aa10.76□□□□□ -0.69
SMARCD2-208ENST00000580054 STAG2Q8N3U4 1231 aa10.76□□□□□ -0.69
SMARCD2-208ENST00000580054 MICAL1Q8TDZ2 1067 aa10.76□□□□□ -0.69
SMARCD2-208ENST00000580054 DNAJB3Q8WWF6 145 aa10.76□□□□□ -0.69
SMARCD2-208ENST00000580054 RMDN1Q96DB5 314 aa10.76□□□□□ -0.69
SMARCD2-208ENST00000580054 AMNQ9BXJ7 453 aa10.76□□□□□ -0.69
SMARCD2-208ENST00000580054 ZNF215Q9UL58 517 aaPredicted RBP10.76□□□□□ -0.69
SMARCD2-208ENST00000580054 CACNA1GO43497 2377 aa10.76□□□□□ -0.69
SMARCD2-208ENST00000580054 DENND4AQ7Z401 1863 aa10.76□□□□□ -0.69
SMARCD2-208ENST00000580054 OTOGLQ3ZCN5 2332 aa10.75□□□□□ -0.69
SMARCD2-208ENST00000580054 C2CD4DB7Z1M9 353 aa10.75□□□□□ -0.69
SMARCD2-208ENST00000580054 ASGR2P07307 311 aa10.75□□□□□ -0.69
SMARCD2-208ENST00000580054 PARP1P09874 1014 aaKnown RBP10.75□□□□□ -0.69
SMARCD2-208ENST00000580054 MARK3P27448 753 aa10.75□□□□□ -0.69
SMARCD2-208ENST00000580054 PDE1AP54750 535 aa10.75□□□□□ -0.69
SMARCD2-208ENST00000580054 APOBRQ0VD83 1088 aa10.75□□□□□ -0.69
SMARCD2-208ENST00000580054 PPFIA1Q13136 1202 aa10.75□□□□□ -0.69
SMARCD2-208ENST00000580054 NMIQ13287 307 aaPredicted RBP10.75□□□□□ -0.69
SMARCD2-208ENST00000580054 MTMR3Q13615 1198 aa10.75□□□□□ -0.69
SMARCD2-208ENST00000580054 KCNC3Q14003 757 aa10.75□□□□□ -0.69
SMARCD2-208ENST00000580054 ANKRD54Q6NXT1 300 aa10.75□□□□□ -0.69
SMARCD2-208ENST00000580054 TAF2Q6P1X5 1199 aa10.75□□□□□ -0.69
SMARCD2-208ENST00000580054 DGKHQ86XP1 1220 aa10.75□□□□□ -0.69
SMARCD2-208ENST00000580054 CCDC136Q96JN2 1154 aa10.75□□□□□ -0.69
SMARCD2-208ENST00000580054 KAT14Q9H8E8 782 aa10.75□□□□□ -0.69
SMARCD2-208ENST00000580054 TUBE1Q9UJT0 475 aa10.75□□□□□ -0.69
SMARCD2-208ENST00000580054 NRCAMQ92823 1304 aa10.75□□□□□ -0.69
SMARCD2-208ENST00000580054 ACACBO00763 2458 aa10.75□□□□□ -0.69
SMARCD2-208ENST00000580054 TRIM6-TRIM34B2RNG4 842 aa10.74□□□□□ -0.69
SMARCD2-208ENST00000580054 FSCN2O14926 492 aa10.74□□□□□ -0.69
SMARCD2-208ENST00000580054 FGF18O76093 207 aa10.74□□□□□ -0.69
SMARCD2-208ENST00000580054 PCP11498 1178 aaKnown RBP10.74□□□□□ -0.69
SMARCD2-208ENST00000580054 SCG2P13521 617 aa10.74□□□□□ -0.69
SMARCD2-208ENST00000580054 MRPS6P82932 125 aaKnown RBP10.74□□□□□ -0.69
SMARCD2-208ENST00000580054 TMEM62Q0P6H9 643 aa10.74□□□□□ -0.69
SMARCD2-208ENST00000580054 GRIK4Q16099 956 aa10.74□□□□□ -0.69
SMARCD2-208ENST00000580054 SLC35G1Q2M3R5 365 aa10.74□□□□□ -0.69
SMARCD2-208ENST00000580054 MARCH8Q5T0T0 291 aa10.74□□□□□ -0.69
SMARCD2-208ENST00000580054 PLPP4Q5VZY2 271 aa10.74□□□□□ -0.69
SMARCD2-208ENST00000580054 CWF19L1Q69YN2 538 aaKnown RBP10.74□□□□□ -0.69
SMARCD2-208ENST00000580054 MCTP2Q6DN12 878 aa10.74□□□□□ -0.69
SMARCD2-208ENST00000580054 ASTLQ6HA08 431 aaPredicted RBP10.74□□□□□ -0.69
SMARCD2-208ENST00000580054 ENAHQ8N8S7 591 aaPredicted RBP10.74□□□□□ -0.69
SMARCD2-208ENST00000580054 ESR2Q92731 530 aa10.74□□□□□ -0.69
SMARCD2-208ENST00000580054 INPP4AQ96PE3 977 aaPredicted RBP10.74□□□□□ -0.69
SMARCD2-208ENST00000580054 FAM49AQ9H0Q0 323 aaPredicted RBP10.74□□□□□ -0.69
SMARCD2-208ENST00000580054 RWDD1Q9H446 243 aaPredicted RBP10.74□□□□□ -0.69
SMARCD2-208ENST00000580054 POMKQ9H5K3 350 aa10.74□□□□□ -0.69
SMARCD2-208ENST00000580054 RTEL1Q9NZ71 1219 aa10.74□□□□□ -0.69
SMARCD2-208ENST00000580054 SORCS3Q9UPU3 1222 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms