RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 NTRK3Q16288 839 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 RRP12Q5JTH9 1297 aaKnown RBP4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 TBCELQ5QJ74 424 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 FAM83BQ5T0W9 1011 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 TTBK2Q6IQ55 1244 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 GDF6Q6KF10 455 aaPredicted RBP4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 APOA5Q6Q788 366 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 CASC1Q6TDU7 716 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 KIAA1211Q6ZU35 1233 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 RUFY3Q7L099 469 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 FASTKD5Q7L8L6 764 aaKnown RBP4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 SPICE1Q8N0Z3 855 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 STAG2Q8N3U4 1231 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 PLPP7Q8NBV4 271 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 FLCNQ8NFG4 579 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 SHISA4Q96DD7 197 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 TMEM87BQ96K49 555 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 MFSD14AQ96MC6 490 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 JAKMIP1Q96N16 626 aaKnown RBP4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 P2RX7Q99572 595 aaKnown RBP4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 OSBPL1AQ9BXW6 950 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 LRRC2Q9BYS8 371 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 UPF3BQ9BZI7 483 aaKnown RBP4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 MUC3BQ9H195 1237 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 CPVLQ9H3G5 476 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 RPAP3Q9H6T3 665 aaPredicted RBP4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 ZNF287Q9HBT7 754 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 CABP5Q9NP86 173 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 ZNF358Q9NW07 568 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 BTBD7Q9P203 1132 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 MAD2L2Q9UI95 211 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 HCN4Q9Y3Q4 1203 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 PCDHGA11Q9Y5H2 935 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 LOXHD1Q8IVV2 1947 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 SIP14410 1827 aa4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 MYH9P35579 1960 aaKnown RBP4.44□□□□□ -1.7
SMARCE1-215ENST00000578995 USP17L15C9J2P7 530 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 USP17L13C9JLJ4 530 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 USP17L11C9JVI0 530 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 USP17L18D6R9N7 530 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 USP17L22D6RA61 530 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 USP17L17D6RBQ6 530 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 USP17L19D6RCP7 530 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 USP17L20D6RJB6 530 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 OPLAHO14841 1288 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 IFIT3O14879 490 aaKnown RBP4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 ATP2A1O14983 1001 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 SART1O43290 800 aaKnown RBP4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 DDAH1O94760 285 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 TBC1D8O95759 1140 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 HSPA1AP0DMV8 641 aaKnown RBP4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 HSPA1BP0DMV9 641 aaKnown RBP4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 BMP3P12645 472 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 MCCP23508 829 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 CDC27P30260 824 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 MCM5P33992 734 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 RCAN1P53805 252 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 USP14P54578 494 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 GHRHRQ02643 423 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 USP17L24Q0WX57 530 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 GRM1Q13255 1194 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 KRT32Q14532 448 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 TMEM132BQ14DG7 1078 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 TMEM132AQ24JP5 1023 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 TMEM67Q5HYA8 995 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 SLFN13Q68D06 897 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 GADL1Q6ZQY3 521 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 IQCA1Q86XH1 822 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 ZNF654Q8IZM8 581 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 CACTIN-AS1Q8N1I8 211 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 DCAF4Q8WV16 495 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 USP6NLQ92738 828 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 ATG4CQ96DT6 458 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 FGD4Q96M96 766 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 MAP3K14Q99558 947 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 MYL10Q9BUA6 226 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 ARHGAP39Q9C0H5 1083 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 PORCNQ9H237 461 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 RANBP17Q9H2T7 1088 aaKnown RBP4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 RIOX1Q9H6W3 641 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 SH2D4AQ9H788 454 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 SLC38A10Q9HBR0 1119 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 PPP1R9AQ9ULJ8 1098 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 STX8Q9UNK0 236 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 HIF3AQ9Y2N7 669 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 KIAA0100Q14667 2235 aaKnown RBP4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 TRIP12Q14669 1992 aaPredicted RBP4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 ASTN1O14525 1302 aa4.43□□□□□ -1.7
SMARCE1-215ENST00000578995 SCN10AQ9Y5Y9 1956 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 VWA5AO00534 786 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 ADAMTS3O15072 1205 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 TRPA1O75762 1119 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 PLEKHA8P1O95397 391 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 CTDNEP1O95476 244 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 HMGB1P09429 215 aaKnown RBP4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 GOLGA8HP0CJ92 632 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 EPB42P16452 691 aa4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 ZKSCAN1P17029 563 aaPredicted RBP4.42□□□□□ -1.7
SMARCE1-215ENST00000578995 RXRAP19793 462 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms