RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 ZBTB10Q96DT7 871 aa24.11■■□□□ 1.45
TSEN54-205ENST00000578415 PSTPIP2Q9H939 334 aa24.11■■□□□ 1.45
TSEN54-205ENST00000578415 AGO3Q9H9G7 860 aaKnown RBP24.11■■□□□ 1.45
TSEN54-205ENST00000578415 PKD2L1Q9P0L9 805 aa24.11■■□□□ 1.45
TSEN54-205ENST00000578415 RBM8AQ9Y5S9 174 aaKnown RBP24.11■■□□□ 1.45
TSEN54-205ENST00000578415 PIEZO1Q92508 2521 aa24.11■■□□□ 1.45
TSEN54-205ENST00000578415 NCK2O43639 380 aa24.1■■□□□ 1.45
TSEN54-205ENST00000578415 UBE2SQ16763 222 aa24.1■■□□□ 1.45
TSEN54-205ENST00000578415 TSHZ1Q6ZSZ6 1077 aa24.1■■□□□ 1.45
TSEN54-205ENST00000578415 GLG1Q92896 1179 aa24.1■■□□□ 1.45
TSEN54-205ENST00000578415 UIMC1Q96RL1 719 aa24.1■■□□□ 1.45
TSEN54-205ENST00000578415 PCYT2Q99447 389 aa24.1■■□□□ 1.45
TSEN54-205ENST00000578415 MTA3Q9BTC8 594 aa24.1■■□□□ 1.45
TSEN54-205ENST00000578415 SH2B2O14492 632 aaPredicted RBP24.09■■□□□ 1.45
TSEN54-205ENST00000578415 PRC1O43663 620 aa24.09■■□□□ 1.45
TSEN54-205ENST00000578415 DGKIO75912 1065 aa24.09■■□□□ 1.45
TSEN54-205ENST00000578415 RXRAP19793 462 aa24.09■■□□□ 1.45
TSEN54-205ENST00000578415 GNAQP50148 359 aa24.09■■□□□ 1.45
TSEN54-205ENST00000578415 MRPS6P82932 125 aaKnown RBP24.09■■□□□ 1.45
TSEN54-205ENST00000578415 MTMR1Q13613 665 aa24.09■■□□□ 1.45
TSEN54-205ENST00000578415 BTG3Q14201 252 aaPredicted RBP24.09■■□□□ 1.45
TSEN54-205ENST00000578415 YTHDC1Q96MU7 727 aaKnown RBP24.09■■□□□ 1.45
TSEN54-205ENST00000578415 SMARCAD1Q9H4L7 1026 aa24.09■■□□□ 1.45
TSEN54-205ENST00000578415 ATG2AQ2TAZ0 1938 aa24.09■■□□□ 1.45
TSEN54-205ENST00000578415 hCG_1642624A0A1W2PR95 340 aa24.08■■□□□ 1.45
TSEN54-205ENST00000578415 MMP1P03956 469 aa24.08■■□□□ 1.45
TSEN54-205ENST00000578415 CD52P31358 61 aa24.08■■□□□ 1.45
TSEN54-205ENST00000578415 GTF2F1P35269 517 aaKnown RBP eCLIP24.08■■□□□ 1.45
TSEN54-205ENST00000578415 IGBP1P78318 339 aa24.08■■□□□ 1.45
TSEN54-205ENST00000578415 CAMK1Q14012 370 aa24.08■■□□□ 1.45
TSEN54-205ENST00000578415 CLUL1Q15846 466 aa24.08■■□□□ 1.45
TSEN54-205ENST00000578415 CASC1Q6TDU7 716 aa24.08■■□□□ 1.45
TSEN54-205ENST00000578415 CRIPAKQ8N1N5 446 aa24.08■■□□□ 1.45
TSEN54-205ENST00000578415 JADE2Q9NQC1 790 aa24.08■■□□□ 1.45
TSEN54-205ENST00000578415 TBX10O75333 385 aa24.07■■□□□ 1.44
TSEN54-205ENST00000578415 CSPG5O95196 566 aa24.07■■□□□ 1.44
TSEN54-205ENST00000578415 INSRRP14616 1297 aa24.07■■□□□ 1.44
TSEN54-205ENST00000578415 IRS1P35568 1242 aa24.07■■□□□ 1.44
TSEN54-205ENST00000578415 SMAD2Q15796 467 aaKnown RBP24.07■■□□□ 1.44
TSEN54-205ENST00000578415 CSPP1Q1MSJ5 1256 aa24.07■■□□□ 1.44
TSEN54-205ENST00000578415 NFXL1Q6ZNB6 911 aa24.07■■□□□ 1.44
TSEN54-205ENST00000578415 RTN4RL1Q86UN2 441 aaPredicted RBP24.07■■□□□ 1.44
TSEN54-205ENST00000578415 PLVAPQ9BX97 442 aa24.07■■□□□ 1.44
TSEN54-205ENST00000578415 FAM49AQ9H0Q0 323 aaPredicted RBP24.07■■□□□ 1.44
TSEN54-205ENST00000578415 ALG13Q9NP73 1137 aaKnown RBP24.07■■□□□ 1.44
TSEN54-205ENST00000578415 TTC3P53804 2025 aa24.06■■□□□ 1.44
TSEN54-205ENST00000578415 CCDC69A6NI79 296 aa24.06■■□□□ 1.44
TSEN54-205ENST00000578415 MBTPS2O43462 519 aa24.06■■□□□ 1.44
TSEN54-205ENST00000578415 RAB11FIP4Q86YS3 637 aa24.06■■□□□ 1.44
TSEN54-205ENST00000578415 TMTC2Q8N394 836 aa24.06■■□□□ 1.44
TSEN54-205ENST00000578415 TMEM87BQ96K49 555 aa24.06■■□□□ 1.44
TSEN54-205ENST00000578415 PCDHA6Q9UN73 950 aa24.06■■□□□ 1.44
TSEN54-205ENST00000578415 PLAGL2Q9UPG8 496 aa24.06■■□□□ 1.44
TSEN54-205ENST00000578415 PCDHA8Q9Y5H6 950 aa24.06■■□□□ 1.44
TSEN54-205ENST00000578415 MRPL42Q9Y6G3 142 aaKnown RBP24.06■■□□□ 1.44
TSEN54-205ENST00000578415 RRN3P2A6NIE6 340 aa24.05■■□□□ 1.44
TSEN54-205ENST00000578415 SPDYE3A6NKU9 549 aa24.05■■□□□ 1.44
TSEN54-205ENST00000578415 MAFGO15525 162 aa24.05■■□□□ 1.44
TSEN54-205ENST00000578415 LINC01565O15544 149 aa24.05■■□□□ 1.44
TSEN54-205ENST00000578415 MCM5P33992 734 aa24.05■■□□□ 1.44
TSEN54-205ENST00000578415 JPH1Q9HDC5 661 aaPredicted RBP24.05■■□□□ 1.44
TSEN54-205ENST00000578415 SQORQ9Y6N5 450 aa24.05■■□□□ 1.44
TSEN54-205ENST00000578415 KAT6AQ92794 2004 aa24.05■■□□□ 1.44
TSEN54-205ENST00000578415 RPLP2P05387 115 aaKnown RBP24.04■■□□□ 1.44
TSEN54-205ENST00000578415 DNAJB1P25685 340 aa24.04■■□□□ 1.44
TSEN54-205ENST00000578415 LIFRP42702 1097 aa24.04■■□□□ 1.44
TSEN54-205ENST00000578415 SMAD4Q13485 552 aaKnown RBP24.04■■□□□ 1.44
TSEN54-205ENST00000578415 TMTC3Q6ZXV5 915 aa24.04■■□□□ 1.44
TSEN54-205ENST00000578415 ALYREFQ86V81 257 aaKnown RBP24.04■■□□□ 1.44
TSEN54-205ENST00000578415 CMTR2Q8IYT2 770 aaKnown RBP24.04■■□□□ 1.44
TSEN54-205ENST00000578415 CCDC82Q8N4S0 544 aa24.04■■□□□ 1.44
TSEN54-205ENST00000578415 P2RX5Q93086 422 aa24.04■■□□□ 1.44
TSEN54-205ENST00000578415 IGFLR1Q9H665 355 aa24.04■■□□□ 1.44
TSEN54-205ENST00000578415 TRPV2Q9Y5S1 764 aa24.04■■□□□ 1.44
TSEN54-205ENST00000578415 ITGB1P05556 798 aa24.03■■□□□ 1.44
TSEN54-205ENST00000578415 TMEM62Q0P6H9 643 aa24.03■■□□□ 1.44
TSEN54-205ENST00000578415 ADAM15Q13444 863 aa24.03■■□□□ 1.44
TSEN54-205ENST00000578415 IER5Q5VY09 327 aa24.03■■□□□ 1.44
TSEN54-205ENST00000578415 NPAS4Q8IUM7 802 aa24.03■■□□□ 1.44
TSEN54-205ENST00000578415 CYP2W1Q8TAV3 490 aa24.03■■□□□ 1.44
TSEN54-205ENST00000578415 TRAPPC12Q8WVT3 735 aa24.03■■□□□ 1.44
TSEN54-205ENST00000578415 FTHL17Q9BXU8 183 aa24.03■■□□□ 1.44
TSEN54-205ENST00000578415 UPF3BQ9BZI7 483 aaKnown RBP24.03■■□□□ 1.44
TSEN54-205ENST00000578415 LSG1Q9H089 658 aaKnown RBP24.03■■□□□ 1.44
TSEN54-205ENST00000578415 KCNH7Q9NS40 1196 aa24.03■■□□□ 1.44
TSEN54-205ENST00000578415 SLC9A2Q9UBY0 812 aa24.03■■□□□ 1.44
TSEN54-205ENST00000578415 PADI3Q9ULW8 664 aa24.03■■□□□ 1.44
TSEN54-205ENST00000578415 TRPC6Q9Y210 931 aa24.03■■□□□ 1.44
TSEN54-205ENST00000578415 CALM1P0DP23 149 aa24.02■■□□□ 1.44
TSEN54-205ENST00000578415 CALM2P0DP24 149 aa24.02■■□□□ 1.44
TSEN54-205ENST00000578415 CALM3P0DP25 149 aa24.02■■□□□ 1.44
TSEN54-205ENST00000578415 PLCB4Q15147 1175 aa24.02■■□□□ 1.44
TSEN54-205ENST00000578415 HEATR3Q7Z4Q2 680 aa24.02■■□□□ 1.44
TSEN54-205ENST00000578415 SPPL3Q8TCT6 385 aa24.02■■□□□ 1.44
TSEN54-205ENST00000578415 POP1Q99575 1024 aaKnown RBP24.02■■□□□ 1.44
TSEN54-205ENST00000578415 MXRA8Q9BRK3 442 aa24.02■■□□□ 1.44
TSEN54-205ENST00000578415 CD207Q9UJ71 328 aa24.02■■□□□ 1.44
TSEN54-205ENST00000578415 PCDHA2Q9Y5H9 948 aa24.02■■□□□ 1.44
TSEN54-205ENST00000578415 IGSF9BQ9UPX0 1349 aa24.02■■□□□ 1.44
TSEN54-205ENST00000578415 SLC27A2O14975 620 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms