RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 ATP2A2P16615 1042 aaKnown RBP3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 CPEP16870 476 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 YBX3P16989 372 aaKnown RBP eCLIP3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 CNGA1P29973 690 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 FNTBP49356 437 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 KIF11P52732 1056 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 ITGA1P56199 1179 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 HTRA3P83110 453 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 TMEM132BQ14DG7 1078 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 ZNF174Q15697 407 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 ZNF124Q15973 351 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 CD276Q5ZPR3 534 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 FSTL4Q6MZW2 842 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 LIPIQ6XZB0 460 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 PROSER1Q86XN7 944 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 PASD1Q8IV76 773 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 TMEM151BQ8IW70 566 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 NXPE1Q8N323 547 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 EFHBQ8N7U6 833 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 KIAA1958Q8N8K9 716 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 KYQ8NBH2 561 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 SMC1BQ8NDV3 1235 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 USP7Q93009 1102 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 SCYL1Q96KG9 808 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 PWWP2AQ96N64 755 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 TOX2Q96NM4 488 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 CLIC6Q96NY7 704 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 WRNIP1Q96S55 665 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 GORASP1Q9BQQ3 440 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 C11orf84Q9BUA3 381 aaPredicted RBP3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 PCIF1Q9H4Z3 704 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 EPB41L4AQ9HCS5 686 aaPredicted RBP3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 ACSS2Q9NR19 701 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 DLL4Q9NR61 685 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 OXSMQ9NWU1 459 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 THG1LQ9NWX6 298 aaKnown RBP3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 ARHGAP28Q9P2N2 729 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 SPO11Q9Y5K1 396 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 PMF1-BGLAPU3KQ54 211 aa3.14□□□□□ -1.91
PTP4A1-204ENST00000578299 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 ANKRD62A6NC57 917 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 ZNF839A8K0R7 811 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 DVL2O14641 736 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 FOXP2O15409 715 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 NUAK1O60285 661 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 ZEB2O60315 1214 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 CYP7B1O75881 506 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 PLA2G1BP04054 148 aaKnown RBP3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 BPIP17213 487 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 AOAHP28039 575 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 THBS2P35442 1172 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 LSSP48449 732 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 KPNA1P52294 538 aaPredicted RBP3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 IL2P60568 153 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 PFKPQ01813 784 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 ADAM9Q13443 819 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 SKOR2Q2VWA4 1001 aaPredicted RBP3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 CATSPEREQ5SY80 951 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 CREB3L3Q68CJ9 461 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 CIAPIN1Q6FI81 312 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 TMC5Q6UXY8 1006 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 TTLL7Q6ZT98 887 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 C11orf74Q86VG3 221 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 AFAP1L2Q8N4X5 818 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 UBR7Q8N806 425 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 DTX3Q8N9I9 347 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 ZCRB1Q8TBF4 217 aaKnown RBP3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 IGDCC4Q8TDY8 1250 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 FNIP1Q8TF40 1166 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 CHTF18Q8WVB6 975 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 E2F7Q96AV8 911 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 DACT3Q96B18 629 aaPredicted RBP3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 ZBTB8AQ96BR9 441 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 NOX5Q96PH1 765 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 GBP4Q96PP9 640 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 TTC1Q99614 292 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 SYT3Q9BQG1 590 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 IFT22Q9H7X7 185 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 RBPJLQ9UBG7 517 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 ASB1Q9Y576 335 aa3.13□□□□□ -1.91
PTP4A1-204ENST00000578299 SH3D21A4FU49 640 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 RASSF10A6NK89 507 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 DBX1A6NMT0 343 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 BRINP1O60477 761 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 FKBP9O95302 570 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 CHGBP05060 677 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 MMEP08473 750 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 NCLP19338 710 aaKnown RBP3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 SLC9A1P19634 815 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 PTGS1P23219 599 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 ADCYAP1R1P41586 468 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 AFF3P51826 1226 aaKnown RBP3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 NFKB2Q00653 900 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 STRN3Q13033 797 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 SMAD4Q13485 552 aaKnown RBP3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 EPHA7Q15375 998 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 SKIDA1Q1XH10 827 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 ATP13A4Q4VNC1 1196 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 FKBP9P1Q75LS8 142 aa3.12□□□□□ -1.91
PTP4A1-204ENST00000578299 STRA8Q7Z7C7 330 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms