RNA–Protein interactions for RNA: ENST00000577310.1

SNX11-204, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-204ENST00000577310 PLPP4Q5VZY2 271 aa7.13□□□□□ -1.27
SNX11-204ENST00000577310 CCDC62Q6P9F0 684 aa7.13□□□□□ -1.27
SNX11-204ENST00000577310 ZNF605Q86T29 641 aa7.13□□□□□ -1.27
SNX11-204ENST00000577310 DYNLL2Q96FJ2 89 aa7.13□□□□□ -1.27
SNX11-204ENST00000577310 TCF25Q9BQ70 676 aa7.13□□□□□ -1.27
SNX11-204ENST00000577310 SLC2A4RGQ9NR83 387 aa7.13□□□□□ -1.27
SNX11-204ENST00000577310 NEUROG3Q9Y4Z2 214 aa7.13□□□□□ -1.27
SNX11-204ENST00000577310 F5P12259 2224 aa7.13□□□□□ -1.27
SNX11-204ENST00000577310 ARIH2O95376 493 aa7.12□□□□□ -1.27
SNX11-204ENST00000577310 CAPNS1P04632 268 aa7.12□□□□□ -1.27
SNX11-204ENST00000577310 CTSHP09668 335 aa7.12□□□□□ -1.27
SNX11-204ENST00000577310 STAG3L1P0CL83 205 aa7.12□□□□□ -1.27
SNX11-204ENST00000577310 EDNRBP24530 442 aa7.12□□□□□ -1.27
SNX11-204ENST00000577310 CDK8P49336 464 aa7.12□□□□□ -1.27
SNX11-204ENST00000577310 PLCB3Q01970 1234 aa7.12□□□□□ -1.27
SNX11-204ENST00000577310 SRSF1Q07955 248 aaKnown RBP eCLIP7.12□□□□□ -1.27
SNX11-204ENST00000577310 ZNF252P-AS1Q0IIN9 211 aa7.12□□□□□ -1.27
SNX11-204ENST00000577310 BAATQ14032 418 aaPredicted RBP7.12□□□□□ -1.27
SNX11-204ENST00000577310 PTPN14Q15678 1187 aa7.12□□□□□ -1.27
SNX11-204ENST00000577310 PAN2Q504Q3 1202 aaKnown RBP7.12□□□□□ -1.27
SNX11-204ENST00000577310 MUM1L1Q5H9M0 696 aa7.12□□□□□ -1.27
SNX11-204ENST00000577310 NSMFQ6X4W1 530 aa7.12□□□□□ -1.27
SNX11-204ENST00000577310 NPAS4Q8IUM7 802 aa7.12□□□□□ -1.27
SNX11-204ENST00000577310 MRPS27Q92552 414 aaKnown RBP7.12□□□□□ -1.27
SNX11-204ENST00000577310 ATP6V0A1Q93050 837 aa7.12□□□□□ -1.27
SNX11-204ENST00000577310 EMID1Q96A84 441 aaPredicted RBP7.12□□□□□ -1.27
SNX11-204ENST00000577310 ZNF512BQ96KM6 892 aaPredicted RBP7.12□□□□□ -1.27
SNX11-204ENST00000577310 KLHL5Q96PQ7 755 aa7.12□□□□□ -1.27
SNX11-204ENST00000577310 RIOK1Q9BRS2 568 aaKnown RBP7.12□□□□□ -1.27
SNX11-204ENST00000577310 DDX23Q9BUQ8 820 aaKnown RBP7.12□□□□□ -1.27
SNX11-204ENST00000577310 CCDC8Q9H0W5 538 aaPredicted RBP7.12□□□□□ -1.27
SNX11-204ENST00000577310 BCAS3Q9H6U6 928 aa7.12□□□□□ -1.27
SNX11-204ENST00000577310 EHMT1Q9H9B1 1298 aa7.12□□□□□ -1.27
SNX11-204ENST00000577310 PIH1D3Q9NQM4 214 aaKnown RBP7.12□□□□□ -1.27
SNX11-204ENST00000577310 ENTPD7Q9NQZ7 604 aa7.12□□□□□ -1.27
SNX11-204ENST00000577310 PRMT8Q9NR22 394 aaPredicted RBP7.12□□□□□ -1.27
SNX11-204ENST00000577310 NYAP2Q9P242 653 aa7.12□□□□□ -1.27
SNX11-204ENST00000577310 MSRB2Q9Y3D2 182 aa7.12□□□□□ -1.27
SNX11-204ENST00000577310 C2CD3Q4AC94 2353 aa7.12□□□□□ -1.27
SNX11-204ENST00000577310 NOTCH2Q04721 2471 aa7.11□□□□□ -1.27
SNX11-204ENST00000577310 ASCC3Q8N3C0 2202 aaKnown RBP7.11□□□□□ -1.27
SNX11-204ENST00000577310 B4DLN1 442 aa7.11□□□□□ -1.27
SNX11-204ENST00000577310 PPFIA4O75335 1185 aa7.11□□□□□ -1.27
SNX11-204ENST00000577310 KRT38O76015 456 aa7.11□□□□□ -1.27
SNX11-204ENST00000577310 TOP3BO95985 862 aaKnown RBP7.11□□□□□ -1.27
SNX11-204ENST00000577310 NCLP19338 710 aaKnown RBP7.11□□□□□ -1.27
SNX11-204ENST00000577310 HOXC8P31273 242 aa7.11□□□□□ -1.27
SNX11-204ENST00000577310 NOVA1P51513 510 aaKnown RBP7.11□□□□□ -1.27
SNX11-204ENST00000577310 MRPL12P52815 198 aaKnown RBP7.11□□□□□ -1.27
SNX11-204ENST00000577310 TSSK4Q6SA08 328 aa7.11□□□□□ -1.27
SNX11-204ENST00000577310 GPR149Q86SP6 731 aa7.11□□□□□ -1.27
SNX11-204ENST00000577310 THNSL1Q8IYQ7 743 aa7.11□□□□□ -1.27
SNX11-204ENST00000577310 C12orf76Q8N812 135 aaPredicted RBP7.11□□□□□ -1.27
SNX11-204ENST00000577310 MRPL43Q8N983 215 aaKnown RBP7.11□□□□□ -1.27
SNX11-204ENST00000577310 C12orf50Q8NA57 414 aaPredicted RBP7.11□□□□□ -1.27
SNX11-204ENST00000577310 CHURC1Q8WUH1 139 aa7.11□□□□□ -1.27
SNX11-204ENST00000577310 RSAD2Q8WXG1 361 aa7.11□□□□□ -1.27
SNX11-204ENST00000577310 CLDN23Q96B33 292 aa7.11□□□□□ -1.27
SNX11-204ENST00000577310 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.11□□□□□ -1.27
SNX11-204ENST00000577310 CRNKL1Q9BZJ0 848 aaKnown RBP7.11□□□□□ -1.27
SNX11-204ENST00000577310 DCP1AQ9NPI6 582 aaPredicted RBP7.11□□□□□ -1.27
SNX11-204ENST00000577310 SYNPO2Q9UMS6 1093 aa7.11□□□□□ -1.27
SNX11-204ENST00000577310 FRMPD2Q68DX3 1309 aaPredicted RBP7.1□□□□□ -1.27
SNX11-204ENST00000577310 FANCIQ9NVI1 1328 aa7.1□□□□□ -1.27
SNX11-204ENST00000577310 DOPEY2Q9Y3R5 2298 aa7.1□□□□□ -1.27
SNX11-204ENST00000577310 C17orf102A2RUQ5 167 aa7.1□□□□□ -1.27
SNX11-204ENST00000577310 FAM170BA6NMN3 283 aa7.1□□□□□ -1.27
SNX11-204ENST00000577310 J3QKU1 62 aa7.1□□□□□ -1.27
SNX11-204ENST00000577310 CLASP2O75122 1294 aaKnown RBP7.1□□□□□ -1.27
SNX11-204ENST00000577310 IDH1O75874 414 aaKnown RBP7.1□□□□□ -1.27
SNX11-204ENST00000577310 C1QL1O75973 258 aa7.1□□□□□ -1.27
SNX11-204ENST00000577310 ZNF806P0C7X5 589 aa7.1□□□□□ -1.27
SNX11-204ENST00000577310 CYP2D6P10635 497 aa7.1□□□□□ -1.27
SNX11-204ENST00000577310 CNR2P34972 360 aa7.1□□□□□ -1.27
SNX11-204ENST00000577310 RPS9P46781 194 aaKnown RBP7.1□□□□□ -1.27
SNX11-204ENST00000577310 STAT2P52630 851 aa7.1□□□□□ -1.27
SNX11-204ENST00000577310 PRKCQQ04759 706 aa7.1□□□□□ -1.27
SNX11-204ENST00000577310 EXOSC9Q06265 439 aaKnown RBP7.1□□□□□ -1.27
SNX11-204ENST00000577310 APOBRQ0VD83 1088 aa7.1□□□□□ -1.27
SNX11-204ENST00000577310 TROAPQ12815 778 aa7.1□□□□□ -1.27
SNX11-204ENST00000577310 SIM2Q14190 667 aaPredicted RBP7.1□□□□□ -1.27
SNX11-204ENST00000577310 LETM2Q2VYF4 491 aa7.1□□□□□ -1.27
SNX11-204ENST00000577310 CCDC158Q5M9N0 1113 aa7.1□□□□□ -1.27
SNX11-204ENST00000577310 TTC39AQ5SRH9 613 aa7.1□□□□□ -1.27
SNX11-204ENST00000577310 SPOUT1Q5T280 376 aaKnown RBP7.1□□□□□ -1.27
SNX11-204ENST00000577310 RSPO2Q6UXX9 243 aaPredicted RBP7.1□□□□□ -1.27
SNX11-204ENST00000577310 MAMSTRQ6ZN01 415 aa7.1□□□□□ -1.27
SNX11-204ENST00000577310 C16orf86Q6ZW13 317 aa7.1□□□□□ -1.27
SNX11-204ENST00000577310 CHST3Q7LGC8 479 aa7.1□□□□□ -1.27
SNX11-204ENST00000577310 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.1□□□□□ -1.27
SNX11-204ENST00000577310 FAM160B2Q86V87 743 aa7.1□□□□□ -1.27
SNX11-204ENST00000577310 DNERQ8NFT8 737 aa7.1□□□□□ -1.27
SNX11-204ENST00000577310 MKL1Q969V6 931 aa7.1□□□□□ -1.27
SNX11-204ENST00000577310 EPS15L1Q9UBC2 864 aa7.1□□□□□ -1.27
SNX11-204ENST00000577310 HDAC5Q9UQL6 1122 aa7.1□□□□□ -1.27
SNX11-204ENST00000577310 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.1□□□□□ -1.27
SNX11-204ENST00000577310 CACNA1EQ15878 2313 aa7.1□□□□□ -1.27
SNX11-204ENST00000577310 MTCL1Q9Y4B5 1905 aaKnown RBP7.09□□□□□ -1.27
SNX11-204ENST00000577310 LAMA4Q16363 1823 aa7.09□□□□□ -1.27
SNX11-204ENST00000577310 MAGEB6P1A0A0J9YX57 407 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms