RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 ANKRD35Q8N283 1001 aa7.37□□□□□ -1.23
NUP88-212ENST00000576708 GMCL1P1Q8NEA9 526 aa7.37□□□□□ -1.23
NUP88-212ENST00000576708 NACAP1Q9BZK3 213 aa7.37□□□□□ -1.23
NUP88-212ENST00000576708 IL17RBQ9NRM6 502 aa7.37□□□□□ -1.23
NUP88-212ENST00000576708 NRBP1Q9UHY1 535 aa7.37□□□□□ -1.23
NUP88-212ENST00000576708 KLF15Q9UIH9 416 aa7.37□□□□□ -1.23
NUP88-212ENST00000576708 FEM1BQ9UK73 627 aa7.37□□□□□ -1.23
NUP88-212ENST00000576708 CNPY2Q9Y2B0 182 aa7.37□□□□□ -1.23
NUP88-212ENST00000576708 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.37□□□□□ -1.23
NUP88-212ENST00000576708 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.37□□□□□ -1.23
NUP88-212ENST00000576708 MYH4Q9Y623 1939 aa7.37□□□□□ -1.23
NUP88-212ENST00000576708 PLXNA1Q9UIW2 1896 aa7.36□□□□□ -1.23
NUP88-212ENST00000576708 ZNF536O15090 1300 aa7.36□□□□□ -1.23
NUP88-212ENST00000576708 SMCHD1A6NHR9 2005 aa7.36□□□□□ -1.23
NUP88-212ENST00000576708 ATP2A1O14983 1001 aa7.36□□□□□ -1.23
NUP88-212ENST00000576708 RARAP10276 462 aa7.36□□□□□ -1.23
NUP88-212ENST00000576708 MAP2K3P46734 347 aa7.36□□□□□ -1.23
NUP88-212ENST00000576708 ACLYP53396 1101 aa7.36□□□□□ -1.23
NUP88-212ENST00000576708 IKQ13123 557 aaPredicted RBP7.36□□□□□ -1.23
NUP88-212ENST00000576708 ACVR2BQ13705 512 aa7.36□□□□□ -1.23
NUP88-212ENST00000576708 KCNA10Q16322 511 aa7.36□□□□□ -1.23
NUP88-212ENST00000576708 LRRFIP1Q32MZ4 808 aaKnown RBP7.36□□□□□ -1.23
NUP88-212ENST00000576708 TMEM63BQ5T3F8 832 aa7.36□□□□□ -1.23
NUP88-212ENST00000576708 ZNF468Q5VIY5 522 aaPredicted RBP7.36□□□□□ -1.23
NUP88-212ENST00000576708 TTBK2Q6IQ55 1244 aa7.36□□□□□ -1.23
NUP88-212ENST00000576708 CCDC174Q6PII3 467 aa7.36□□□□□ -1.23
NUP88-212ENST00000576708 MAMDC4Q6UXC1 1216 aa7.36□□□□□ -1.23
NUP88-212ENST00000576708 TTC16Q8NEE8 873 aa7.36□□□□□ -1.23
NUP88-212ENST00000576708 KLHDC9Q8NEP7 349 aa7.36□□□□□ -1.23
NUP88-212ENST00000576708 ACDQ96AP0 544 aa7.36□□□□□ -1.23
NUP88-212ENST00000576708 FAM227BQ96M60 508 aa7.36□□□□□ -1.23
NUP88-212ENST00000576708 GUCD1Q96NT3 240 aa7.36□□□□□ -1.23
NUP88-212ENST00000576708 ZNF287Q9HBT7 754 aa7.36□□□□□ -1.23
NUP88-212ENST00000576708 FAM184BQ9ULE4 1060 aa7.36□□□□□ -1.23
NUP88-212ENST00000576708 STX8Q9UNK0 236 aa7.36□□□□□ -1.23
NUP88-212ENST00000576708 FNDC3AQ9Y2H6 1198 aaKnown RBP7.36□□□□□ -1.23
NUP88-212ENST00000576708 PLIN4Q96Q06 1357 aa7.35□□□□□ -1.23
NUP88-212ENST00000576708 ASTN1O14525 1302 aa7.35□□□□□ -1.23
NUP88-212ENST00000576708 SYNGAP1Q96PV0 1343 aa7.35□□□□□ -1.23
NUP88-212ENST00000576708 A0A0D9SFI3 127 aa7.35□□□□□ -1.23
NUP88-212ENST00000576708 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.35□□□□□ -1.23
NUP88-212ENST00000576708 TSPY2A6NKD2 308 aa7.35□□□□□ -1.23
NUP88-212ENST00000576708 DLL1O00548 723 aa7.35□□□□□ -1.23
NUP88-212ENST00000576708 RANBP6O60518 1105 aaKnown RBP7.35□□□□□ -1.23
NUP88-212ENST00000576708 SLC3A2P08195 630 aaKnown RBP7.35□□□□□ -1.23
NUP88-212ENST00000576708 CLTBP09497 229 aa7.35□□□□□ -1.23
NUP88-212ENST00000576708 C6orf222P0C671 652 aaPredicted RBP7.35□□□□□ -1.23
NUP88-212ENST00000576708 ALAS1P13196 640 aa7.35□□□□□ -1.23
NUP88-212ENST00000576708 LORP23490 312 aaPredicted RBP7.35□□□□□ -1.23
NUP88-212ENST00000576708 SLC16A2P36021 539 aa7.35□□□□□ -1.23
NUP88-212ENST00000576708 SLC1A4P43007 532 aa7.35□□□□□ -1.23
NUP88-212ENST00000576708 PDE1AP54750 535 aa7.35□□□□□ -1.23
NUP88-212ENST00000576708 MARSP56192 900 aaKnown RBP7.35□□□□□ -1.23
NUP88-212ENST00000576708 BEX3Q00994 111 aa7.35□□□□□ -1.23
NUP88-212ENST00000576708 FAAP100Q0VG06 881 aa7.35□□□□□ -1.23
NUP88-212ENST00000576708 CCDC144BQ3MJ40 725 aa7.35□□□□□ -1.23
NUP88-212ENST00000576708 MUM1L1Q5H9M0 696 aa7.35□□□□□ -1.23
NUP88-212ENST00000576708 RRP12Q5JTH9 1297 aaKnown RBP7.35□□□□□ -1.23
NUP88-212ENST00000576708 CCSAPQ6IQ19 270 aaPredicted RBP7.35□□□□□ -1.23
NUP88-212ENST00000576708 ARMCX2Q7L311 632 aa7.35□□□□□ -1.23
NUP88-212ENST00000576708 ZNF438Q7Z4V0 828 aa7.35□□□□□ -1.23
NUP88-212ENST00000576708 CCDC144CPQ8IYA2 1237 aa7.35□□□□□ -1.23
NUP88-212ENST00000576708 FAM133AQ8N9E0 248 aa7.35□□□□□ -1.23
NUP88-212ENST00000576708 CHST13Q8NET6 341 aa7.35□□□□□ -1.23
NUP88-212ENST00000576708 WHAMMQ8TF30 809 aa7.35□□□□□ -1.23
NUP88-212ENST00000576708 STAG1Q8WVM7 1258 aa7.35□□□□□ -1.23
NUP88-212ENST00000576708 EVI5LQ96CN4 794 aa7.35□□□□□ -1.23
NUP88-212ENST00000576708 YTHDC1Q96MU7 727 aaKnown RBP7.35□□□□□ -1.23
NUP88-212ENST00000576708 OXCT2Q9BYC2 517 aaPredicted RBP7.35□□□□□ -1.23
NUP88-212ENST00000576708 LNPKQ9C0E8 428 aa7.35□□□□□ -1.23
NUP88-212ENST00000576708 KATNBL1Q9H079 304 aa7.35□□□□□ -1.23
NUP88-212ENST00000576708 A1CFQ9NQ94 594 aaKnown RBP7.35□□□□□ -1.23
NUP88-212ENST00000576708 STARD7Q9NQZ5 370 aa7.35□□□□□ -1.23
NUP88-212ENST00000576708 RNF146Q9NTX7 359 aa7.35□□□□□ -1.23
NUP88-212ENST00000576708 TMEM39AQ9NV64 488 aa7.35□□□□□ -1.23
NUP88-212ENST00000576708 TMEM63CQ9P1W3 806 aa7.35□□□□□ -1.23
NUP88-212ENST00000576708 STXBP5LQ9Y2K9 1186 aa7.35□□□□□ -1.23
NUP88-212ENST00000576708 FRMPD2Q68DX3 1309 aaPredicted RBP7.34□□□□□ -1.23
NUP88-212ENST00000576708 KIAA0355O15063 1070 aa7.34□□□□□ -1.23
NUP88-212ENST00000576708 CTAGE5O15320 804 aa7.34□□□□□ -1.23
NUP88-212ENST00000576708 MMP20O60882 483 aa7.34□□□□□ -1.23
NUP88-212ENST00000576708 DUSP11O75319 330 aaKnown RBP7.34□□□□□ -1.23
NUP88-212ENST00000576708 FGAP02671 866 aa7.34□□□□□ -1.23
NUP88-212ENST00000576708 ASGR1P07306 291 aa7.34□□□□□ -1.23
NUP88-212ENST00000576708 RAG1P15918 1043 aa7.34□□□□□ -1.23
NUP88-212ENST00000576708 STAT2P52630 851 aa7.34□□□□□ -1.23
NUP88-212ENST00000576708 OAZ1P54368 228 aa7.34□□□□□ -1.23
NUP88-212ENST00000576708 HAND2P61296 217 aa7.34□□□□□ -1.23
NUP88-212ENST00000576708 NMIQ13287 307 aaPredicted RBP7.34□□□□□ -1.23
NUP88-212ENST00000576708 CCDC96Q2M329 555 aa7.34□□□□□ -1.23
NUP88-212ENST00000576708 RCSD1Q6JBY9 416 aa7.34□□□□□ -1.23
NUP88-212ENST00000576708 EEPD1Q7L9B9 569 aa7.34□□□□□ -1.23
NUP88-212ENST00000576708 ZNF589Q86UQ0 364 aaPredicted RBP7.34□□□□□ -1.23
NUP88-212ENST00000576708 FAM160B2Q86V87 743 aa7.34□□□□□ -1.23
NUP88-212ENST00000576708 GJD3Q8N144 294 aa7.34□□□□□ -1.23
NUP88-212ENST00000576708 MSL3Q8N5Y2 521 aaKnown RBP7.34□□□□□ -1.23
NUP88-212ENST00000576708 CHURC1Q8WUH1 139 aa7.34□□□□□ -1.23
NUP88-212ENST00000576708 TMEM47Q9BQJ4 181 aa7.34□□□□□ -1.23
NUP88-212ENST00000576708 ACAD9Q9H845 621 aa7.34□□□□□ -1.23
NUP88-212ENST00000576708 PDGFCQ9NRA1 345 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms