RNA–Protein interactions for RNA: ENST00000574412.5

CXCL16-203, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-203ENST00000574412 MRE11P49959 708 aa23.73■■□□□ 1.39
CXCL16-203ENST00000574412 TNFAIP2Q03169 654 aa23.73■■□□□ 1.39
CXCL16-203ENST00000574412 IRF5Q13568 498 aa23.73■■□□□ 1.39
CXCL16-203ENST00000574412 ARHGEF6Q15052 776 aa23.73■■□□□ 1.39
CXCL16-203ENST00000574412 UGCGQ16739 394 aa23.73■■□□□ 1.39
CXCL16-203ENST00000574412 HSDL1Q3SXM5 330 aa23.73■■□□□ 1.39
CXCL16-203ENST00000574412 NAALADL2Q58DX5 795 aa23.73■■□□□ 1.39
CXCL16-203ENST00000574412 TRMT1LQ7Z2T5 733 aaKnown RBP23.73■■□□□ 1.39
CXCL16-203ENST00000574412 ERCC4Q92889 916 aaPredicted RBP23.73■■□□□ 1.39
CXCL16-203ENST00000574412 SPATA33Q96N06 139 aa23.73■■□□□ 1.39
CXCL16-203ENST00000574412 HSD17B14Q9BPX1 270 aa23.73■■□□□ 1.39
CXCL16-203ENST00000574412 LXNQ9BS40 222 aa23.73■■□□□ 1.39
CXCL16-203ENST00000574412 ARHGAP1Q07960 439 aa23.72■■□□□ 1.39
CXCL16-203ENST00000574412 DHX8Q14562 1220 aaKnown RBP23.72■■□□□ 1.39
CXCL16-203ENST00000574412 TMEM119Q4V9L6 283 aa23.72■■□□□ 1.39
CXCL16-203ENST00000574412 SASS6Q6UVJ0 657 aa23.72■■□□□ 1.39
CXCL16-203ENST00000574412 ELOA2Q8IYF1 753 aaPredicted RBP23.72■■□□□ 1.39
CXCL16-203ENST00000574412 CEP57L1Q8IYX8 460 aa23.72■■□□□ 1.39
CXCL16-203ENST00000574412 POLR3CQ9BUI4 534 aaPredicted RBP23.72■■□□□ 1.39
CXCL16-203ENST00000574412 PCDHA10Q9Y5I2 948 aa23.72■■□□□ 1.39
CXCL16-203ENST00000574412 E9PMD0 336 aa23.71■■□□□ 1.39
CXCL16-203ENST00000574412 GH1P01241 217 aa23.71■■□□□ 1.39
CXCL16-203ENST00000574412 AFMP43652 599 aa23.71■■□□□ 1.39
CXCL16-203ENST00000574412 PSMC6P62333 389 aa23.71■■□□□ 1.39
CXCL16-203ENST00000574412 DUSP28Q4G0W2 176 aa23.71■■□□□ 1.39
CXCL16-203ENST00000574412 IQSEC1Q6DN90 963 aa23.71■■□□□ 1.39
CXCL16-203ENST00000574412 PDXDC2PQ6P474 469 aa23.71■■□□□ 1.39
CXCL16-203ENST00000574412 SMAP1Q8IYB5 467 aaPredicted RBP23.71■■□□□ 1.39
CXCL16-203ENST00000574412 KIAA1468Q9P260 1216 aa23.71■■□□□ 1.39
CXCL16-203ENST00000574412 GSTTP1A0A1W2PQM5 241 aa23.7■■□□□ 1.39
CXCL16-203ENST00000574412 NOP56O00567 594 aaKnown RBP23.7■■□□□ 1.39
CXCL16-203ENST00000574412 CNGA1P29973 690 aa23.7■■□□□ 1.39
CXCL16-203ENST00000574412 CACNB2Q08289 660 aaPredicted RBP23.7■■□□□ 1.39
CXCL16-203ENST00000574412 HYIQ5T013 277 aa23.7■■□□□ 1.39
CXCL16-203ENST00000574412 SWSAP1Q6NVH7 229 aa23.7■■□□□ 1.39
CXCL16-203ENST00000574412 ABHD15Q6UXT9 468 aa23.7■■□□□ 1.39
CXCL16-203ENST00000574412 CCDC60Q8IWA6 550 aaPredicted RBP23.7■■□□□ 1.39
CXCL16-203ENST00000574412 TUFT1Q9NNX1 390 aa23.7■■□□□ 1.39
CXCL16-203ENST00000574412 GABBR1Q9UBS5 961 aa23.7■■□□□ 1.39
CXCL16-203ENST00000574412 PTCH2Q9Y6C5 1203 aa23.7■■□□□ 1.39
CXCL16-203ENST00000574412 STK24Q9Y6E0 443 aa23.7■■□□□ 1.39
CXCL16-203ENST00000574412 BACH1O14867 736 aa23.7■■□□□ 1.38
CXCL16-203ENST00000574412 ZBTB39O15060 712 aa23.7■■□□□ 1.38
CXCL16-203ENST00000574412 P4HBP07237 508 aaKnown RBP23.7■■□□□ 1.38
CXCL16-203ENST00000574412 PSAPP07602 524 aa23.7■■□□□ 1.38
CXCL16-203ENST00000574412 SLFN14P0C7P3 912 aa23.7■■□□□ 1.38
CXCL16-203ENST00000574412 SUPT20HL2P0C7V6 817 aa23.7■■□□□ 1.38
CXCL16-203ENST00000574412 CYBAP13498 195 aa23.7■■□□□ 1.38
CXCL16-203ENST00000574412 PRKAR2AP13861 404 aaKnown RBP23.7■■□□□ 1.38
CXCL16-203ENST00000574412 MIS18BP1Q6P0N0 1132 aa23.7■■□□□ 1.38
CXCL16-203ENST00000574412 TRMT44Q8IYL2 757 aaKnown RBP23.7■■□□□ 1.38
CXCL16-203ENST00000574412 OR6J1Q8NGC5 347 aa23.7■■□□□ 1.38
CXCL16-203ENST00000574412 PIGOQ8TEQ8 1089 aa23.7■■□□□ 1.38
CXCL16-203ENST00000574412 GPR20Q99678 358 aa23.7■■□□□ 1.38
CXCL16-203ENST00000574412 PYM1Q9BRP8 204 aaKnown RBP23.7■■□□□ 1.38
CXCL16-203ENST00000574412 NT5C3AQ9H0P0 336 aa23.7■■□□□ 1.38
CXCL16-203ENST00000574412 BLOC1S4Q9NUP1 217 aa23.7■■□□□ 1.38
CXCL16-203ENST00000574412 CASP1P29466 404 aa23.69■■□□□ 1.38
CXCL16-203ENST00000574412 TCF7P36402 384 aaPredicted RBP23.69■■□□□ 1.38
CXCL16-203ENST00000574412 QARSP47897 775 aaKnown RBP23.69■■□□□ 1.38
CXCL16-203ENST00000574412 MDM2Q00987 491 aaPredicted RBP23.69■■□□□ 1.38
CXCL16-203ENST00000574412 MCM6Q14566 821 aa23.69■■□□□ 1.38
CXCL16-203ENST00000574412 RDM1Q8NG50 284 aa23.69■■□□□ 1.38
CXCL16-203ENST00000574412 USP25Q9UHP3 1055 aa23.69■■□□□ 1.38
CXCL16-203ENST00000574412 FAM184BQ9ULE4 1060 aa23.69■■□□□ 1.38
CXCL16-203ENST00000574412 HMGCRP04035 888 aa23.68■■□□□ 1.38
CXCL16-203ENST00000574412 SSBP05455 408 aaKnown RBP eCLIP23.68■■□□□ 1.38
CXCL16-203ENST00000574412 PRR29P0C7W0 189 aa23.68■■□□□ 1.38
CXCL16-203ENST00000574412 IRX5P78411 483 aaPredicted RBP23.68■■□□□ 1.38
CXCL16-203ENST00000574412 PNOCQ13519 176 aa23.68■■□□□ 1.38
CXCL16-203ENST00000574412 LAMC2Q13753 1193 aa23.68■■□□□ 1.38
CXCL16-203ENST00000574412 UTP14CQ5TAP6 766 aaKnown RBP23.68■■□□□ 1.38
CXCL16-203ENST00000574412 KANK3Q6NY19 840 aa23.68■■□□□ 1.38
CXCL16-203ENST00000574412 NEK9Q8TD19 979 aa23.68■■□□□ 1.38
CXCL16-203ENST00000574412 AFG1LQ8WV93 481 aa23.68■■□□□ 1.38
CXCL16-203ENST00000574412 SEPT1Q8WYJ6 367 aa23.68■■□□□ 1.38
CXCL16-203ENST00000574412 DYNC1LI2O43237 492 aaPredicted RBP23.67■■□□□ 1.38
CXCL16-203ENST00000574412 XRCC6P12956 609 aaKnown RBP eCLIP23.67■■□□□ 1.38
CXCL16-203ENST00000574412 CCND3P30281 292 aaPredicted RBP23.67■■□□□ 1.38
CXCL16-203ENST00000574412 TRIM50Q86XT4 487 aa23.67■■□□□ 1.38
CXCL16-203ENST00000574412 RNF214Q8ND24 703 aa23.67■■□□□ 1.38
CXCL16-203ENST00000574412 LARP4BQ92615 738 aaKnown RBP23.67■■□□□ 1.38
CXCL16-203ENST00000574412 RAD54LQ92698 747 aa23.67■■□□□ 1.38
CXCL16-203ENST00000574412 PAGE5Q96GU1 130 aa23.67■■□□□ 1.38
CXCL16-203ENST00000574412 MTRQ99707 1265 aa23.67■■□□□ 1.38
CXCL16-203ENST00000574412 STK17AQ9UEE5 414 aa23.67■■□□□ 1.38
CXCL16-203ENST00000574412 HOOK1Q9UJC3 728 aaKnown RBP23.67■■□□□ 1.38
CXCL16-203ENST00000574412 TMEM150BA6NC51 233 aa23.67■■□□□ 1.38
CXCL16-203ENST00000574412 ATG7O95352 703 aa23.67■■□□□ 1.38
CXCL16-203ENST00000574412 HSPA8P11142 646 aaKnown RBP23.67■■□□□ 1.38
CXCL16-203ENST00000574412 PSMC5P62195 406 aa23.67■■□□□ 1.38
CXCL16-203ENST00000574412 POSTNQ15063 836 aa23.67■■□□□ 1.38
CXCL16-203ENST00000574412 TLK2Q86UE8 772 aa23.67■■□□□ 1.38
CXCL16-203ENST00000574412 ZSWIM4Q9H7M6 989 aa23.67■■□□□ 1.38
CXCL16-203ENST00000574412 ZNF302Q9NR11 478 aa23.67■■□□□ 1.38
CXCL16-203ENST00000574412 TUBE1Q9UJT0 475 aa23.67■■□□□ 1.38
CXCL16-203ENST00000574412 DNM3Q9UQ16 869 aa23.67■■□□□ 1.38
CXCL16-203ENST00000574412 GNEQ9Y223 722 aaKnown RBP23.67■■□□□ 1.38
CXCL16-203ENST00000574412 NKRFO15226 690 aaKnown RBP eCLIP23.66■■□□□ 1.38
CXCL16-203ENST00000574412 ZNF862O60290 1169 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms