RNA–Protein interactions for RNA: ENST00000574121.1

CCNE1-204, Transcript of cyclin E1, humanhuman

TSL 2

Gene CCNE1, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-204ENST00000574121 TRIM50Q86XT4 487 aa17.68■□□□□ 0.42
CCNE1-204ENST00000574121 CCDC60Q8IWA6 550 aaPredicted RBP17.68■□□□□ 0.42
CCNE1-204ENST00000574121 NEK9Q8TD19 979 aa17.68■□□□□ 0.42
CCNE1-204ENST00000574121 ZNF302Q9NR11 478 aa17.68■□□□□ 0.42
CCNE1-204ENST00000574121 MAFBQ9Y5Q3 323 aaPredicted RBP17.68■□□□□ 0.42
CCNE1-204ENST00000574121 STK24Q9Y6E0 443 aa17.68■□□□□ 0.42
CCNE1-204ENST00000574121 IGSF9BQ9UPX0 1349 aa17.68■□□□□ 0.42
CCNE1-204ENST00000574121 BRCA2P51587 3418 aa17.67■□□□□ 0.42
CCNE1-204ENST00000574121 EML1O00423 815 aa17.67■□□□□ 0.42
CCNE1-204ENST00000574121 CDK7P50613 346 aa17.67■□□□□ 0.42
CCNE1-204ENST00000574121 PSMC6P62333 389 aa17.67■□□□□ 0.42
CCNE1-204ENST00000574121 NBPF20Q3BBV1 942 aa17.67■□□□□ 0.42
CCNE1-204ENST00000574121 FOXD4L5Q5VV16 416 aaPredicted RBP17.67■□□□□ 0.42
CCNE1-204ENST00000574121 NCAPH2Q6IBW4 605 aa17.67■□□□□ 0.42
CCNE1-204ENST00000574121 ANKRD33Q7Z3H0 272 aa17.67■□□□□ 0.42
CCNE1-204ENST00000574121 IGSF22Q8N9C0 903 aa17.67■□□□□ 0.42
CCNE1-204ENST00000574121 ERMNQ8TAM6 284 aa17.67■□□□□ 0.42
CCNE1-204ENST00000574121 FOXD4L4Q8WXT5 416 aaPredicted RBP17.67■□□□□ 0.42
CCNE1-204ENST00000574121 TOX2Q96NM4 488 aa17.67■□□□□ 0.42
CCNE1-204ENST00000574121 USP28Q96RU2 1077 aa17.67■□□□□ 0.42
CCNE1-204ENST00000574121 GRIN2DO15399 1336 aa17.67■□□□□ 0.42
CCNE1-204ENST00000574121 SCN10AQ9Y5Y9 1956 aa17.66■□□□□ 0.42
CCNE1-204ENST00000574121 P4HBP07237 508 aaKnown RBP17.66■□□□□ 0.42
CCNE1-204ENST00000574121 TECP42680 631 aa17.66■□□□□ 0.42
CCNE1-204ENST00000574121 SLC39A14Q15043 492 aa17.66■□□□□ 0.42
CCNE1-204ENST00000574121 PTPAQ15257 358 aa17.66■□□□□ 0.42
CCNE1-204ENST00000574121 PDXDC2PQ6P474 469 aa17.66■□□□□ 0.42
CCNE1-204ENST00000574121 C7orf31Q8N865 590 aa17.66■□□□□ 0.42
CCNE1-204ENST00000574121 FAM167AQ96KS9 214 aa17.66■□□□□ 0.42
CCNE1-204ENST00000574121 IPO9Q96P70 1041 aaKnown RBP17.66■□□□□ 0.42
CCNE1-204ENST00000574121 GABBR1Q9UBS5 961 aa17.66■□□□□ 0.42
CCNE1-204ENST00000574121 CFAP45Q9UL16 551 aa17.66■□□□□ 0.42
CCNE1-204ENST00000574121 CLIC4Q9Y696 253 aa17.66■□□□□ 0.42
CCNE1-204ENST00000574121 DOCK5Q9H7D0 1870 aa17.65■□□□□ 0.42
CCNE1-204ENST00000574121 POTEMA6NI47 508 aa17.65■□□□□ 0.42
CCNE1-204ENST00000574121 YEATS4O95619 227 aa17.65■□□□□ 0.42
CCNE1-204ENST00000574121 QARSP47897 775 aaKnown RBP17.65■□□□□ 0.42
CCNE1-204ENST00000574121 ATN1P54259 1190 aaPredicted RBP17.65■□□□□ 0.42
CCNE1-204ENST00000574121 PSMC5P62195 406 aa17.65■□□□□ 0.42
CCNE1-204ENST00000574121 LRRC26Q2I0M4 334 aa17.65■□□□□ 0.42
CCNE1-204ENST00000574121 HAUS3Q68CZ6 603 aa17.65■□□□□ 0.42
CCNE1-204ENST00000574121 ATP8B4Q8TF62 1192 aa17.65■□□□□ 0.42
CCNE1-204ENST00000574121 AK8Q96MA6 479 aa17.65■□□□□ 0.42
CCNE1-204ENST00000574121 HSD17B14Q9BPX1 270 aa17.65■□□□□ 0.42
CCNE1-204ENST00000574121 FTOQ9C0B1 505 aaKnown RBP eCLIP17.65■□□□□ 0.42
CCNE1-204ENST00000574121 RNPEPQ9H4A4 650 aa17.65■□□□□ 0.42
CCNE1-204ENST00000574121 GTF2IRD1Q9UHL9 959 aa17.65■□□□□ 0.42
CCNE1-204ENST00000574121 POTEB3A0JP26 581 aa17.64■□□□□ 0.41
CCNE1-204ENST00000574121 HBP1O60381 514 aa17.64■□□□□ 0.41
CCNE1-204ENST00000574121 GNAT1P11488 350 aa17.64■□□□□ 0.41
CCNE1-204ENST00000574121 MUTP22033 750 aa17.64■□□□□ 0.41
CCNE1-204ENST00000574121 HOXC8P31273 242 aa17.64■□□□□ 0.41
CCNE1-204ENST00000574121 RTP1P59025 263 aa17.64■□□□□ 0.41
CCNE1-204ENST00000574121 PLCB4Q15147 1175 aa17.64■□□□□ 0.41
CCNE1-204ENST00000574121 POTEBQ6S5H4 581 aa17.64■□□□□ 0.41
CCNE1-204ENST00000574121 LINC00301Q8NCQ3 95 aa17.64■□□□□ 0.41
CCNE1-204ENST00000574121 BBXQ8WY36 941 aaPredicted RBP17.64■□□□□ 0.41
CCNE1-204ENST00000574121 EIF2AK1Q9BQI3 630 aaKnown RBP17.64■□□□□ 0.41
CCNE1-204ENST00000574121 ZSWIM4Q9H7M6 989 aa17.64■□□□□ 0.41
CCNE1-204ENST00000574121 LRWD1Q9UFC0 647 aa17.64■□□□□ 0.41
CCNE1-204ENST00000574121 NRCAMQ92823 1304 aa17.64■□□□□ 0.41
CCNE1-204ENST00000574121 RRN3P2A6NIE6 340 aa17.63■□□□□ 0.41
CCNE1-204ENST00000574121 DCDC2CA8MYV0 355 aa17.63■□□□□ 0.41
CCNE1-204ENST00000574121 TLR3O15455 904 aaKnown RBP17.63■□□□□ 0.41
CCNE1-204ENST00000574121 LYPLA2O95372 231 aa17.63■□□□□ 0.41
CCNE1-204ENST00000574121 SMIM10L2AP0DMW4 78 aa17.63■□□□□ 0.41
CCNE1-204ENST00000574121 SMIM10L2BP0DMW5 78 aa17.63■□□□□ 0.41
CCNE1-204ENST00000574121 MARK3P27448 753 aa17.63■□□□□ 0.41
CCNE1-204ENST00000574121 LONP1P36776 959 aaKnown RBP17.63■□□□□ 0.41
CCNE1-204ENST00000574121 CEBPZQ03701 1054 aaKnown RBP17.63■□□□□ 0.41
CCNE1-204ENST00000574121 STK38Q15208 465 aa17.63■□□□□ 0.41
CCNE1-204ENST00000574121 IL17AQ16552 155 aa17.63■□□□□ 0.41
CCNE1-204ENST00000574121 TRIM60Q495X7 471 aa17.63■□□□□ 0.41
CCNE1-204ENST00000574121 XKR3Q5GH77 459 aa17.63■□□□□ 0.41
CCNE1-204ENST00000574121 FAM47CQ5HY64 1035 aa17.63■□□□□ 0.41
CCNE1-204ENST00000574121 FAM126BQ8IXS8 530 aa17.63■□□□□ 0.41
CCNE1-204ENST00000574121 C4orf19Q8IY42 314 aa17.63■□□□□ 0.41
CCNE1-204ENST00000574121 CKAP2LQ8IYA6 745 aa17.63■□□□□ 0.41
CCNE1-204ENST00000574121 LXNQ9BS40 222 aa17.63■□□□□ 0.41
CCNE1-204ENST00000574121 POLR3CQ9BUI4 534 aaPredicted RBP17.63■□□□□ 0.41
CCNE1-204ENST00000574121 TUFT1Q9NNX1 390 aa17.63■□□□□ 0.41
CCNE1-204ENST00000574121 NRBP2Q9NSY0 501 aa17.63■□□□□ 0.41
CCNE1-204ENST00000574121 CHMP5Q9NZZ3 219 aa17.63■□□□□ 0.41
CCNE1-204ENST00000574121 HDAC6Q9UBN7 1215 aa17.63■□□□□ 0.41
CCNE1-204ENST00000574121 TRPC6Q9Y210 931 aa17.63■□□□□ 0.41
CCNE1-204ENST00000574121 SRPRBQ9Y5M8 271 aaKnown RBP17.63■□□□□ 0.41
CCNE1-204ENST00000574121 COL1A2P08123 1366 aa17.63■□□□□ 0.41
CCNE1-204ENST00000574121 VWA3AA6NCI4 1184 aa17.62■□□□□ 0.41
CCNE1-204ENST00000574121 SLC26A4O43511 780 aa17.62■□□□□ 0.41
CCNE1-204ENST00000574121 ZNF862O60290 1169 aa17.62■□□□□ 0.41
CCNE1-204ENST00000574121 PPP6R2O75170 966 aa17.62■□□□□ 0.41
CCNE1-204ENST00000574121 CAPN15O75808 1086 aa17.62■□□□□ 0.41
CCNE1-204ENST00000574121 SLITRK3O94933 977 aa17.62■□□□□ 0.41
CCNE1-204ENST00000574121 CD4P01730 458 aa17.62■□□□□ 0.41
CCNE1-204ENST00000574121 OATP04181 439 aa17.62■□□□□ 0.41
CCNE1-204ENST00000574121 ATP4AP20648 1035 aa17.62■□□□□ 0.41
CCNE1-204ENST00000574121 RPA1P27694 616 aa17.62■□□□□ 0.41
CCNE1-204ENST00000574121 CHMP4BP1P59074 171 aa17.62■□□□□ 0.41
CCNE1-204ENST00000574121 KRT85P78386 507 aa17.62■□□□□ 0.41
CCNE1-204ENST00000574121 PRKCEQ02156 737 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms