RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 PHF7Q9BWX1 381 aaPredicted RBP14.09□□□□□ -0.15
PRPF8-208ENST00000573716 FAM49AQ9H0Q0 323 aaPredicted RBP14.09□□□□□ -0.15
PRPF8-208ENST00000573716 TLE6Q9H808 572 aa14.09□□□□□ -0.15
PRPF8-208ENST00000573716 EHMT1Q9H9B1 1298 aa14.09□□□□□ -0.15
PRPF8-208ENST00000573716 CDY2AQ9Y6F7 541 aa14.09□□□□□ -0.15
PRPF8-208ENST00000573716 SPTBN4Q9H254 2564 aa14.09□□□□□ -0.15
PRPF8-208ENST00000573716 LOXHD1Q8IVV2 1947 aa14.08□□□□□ -0.16
PRPF8-208ENST00000573716 SPATA31C2B4DYI2 1134 aa14.08□□□□□ -0.16
PRPF8-208ENST00000573716 H0Y858 1186 aa14.08□□□□□ -0.16
PRPF8-208ENST00000573716 PER2O15055 1255 aa14.08□□□□□ -0.16
PRPF8-208ENST00000573716 FIBPO43427 364 aa14.08□□□□□ -0.16
PRPF8-208ENST00000573716 ABCB7O75027 752 aa14.08□□□□□ -0.16
PRPF8-208ENST00000573716 GLP2RO95838 553 aa14.08□□□□□ -0.16
PRPF8-208ENST00000573716 SP100P23497 879 aaPredicted RBP14.08□□□□□ -0.16
PRPF8-208ENST00000573716 AVPR2P30518 371 aa14.08□□□□□ -0.16
PRPF8-208ENST00000573716 CD52P31358 61 aa14.08□□□□□ -0.16
PRPF8-208ENST00000573716 ADAM17P78536 824 aa14.08□□□□□ -0.16
PRPF8-208ENST00000573716 RBM10P98175 930 aaKnown RBP14.08□□□□□ -0.16
PRPF8-208ENST00000573716 MGAT3Q09327 533 aa14.08□□□□□ -0.16
PRPF8-208ENST00000573716 SEMA3FQ13275 785 aa14.08□□□□□ -0.16
PRPF8-208ENST00000573716 TAF2Q6P1X5 1199 aa14.08□□□□□ -0.16
PRPF8-208ENST00000573716 TSHZ1Q6ZSZ6 1077 aa14.08□□□□□ -0.16
PRPF8-208ENST00000573716 CMTR2Q8IYT2 770 aaKnown RBP14.08□□□□□ -0.16
PRPF8-208ENST00000573716 SAMD3Q8N6K7 520 aa14.08□□□□□ -0.16
PRPF8-208ENST00000573716 KRT23Q9C075 422 aa14.08□□□□□ -0.16
PRPF8-208ENST00000573716 TLR9Q9NR96 1032 aa14.08□□□□□ -0.16
PRPF8-208ENST00000573716 MAD2L2Q9UI95 211 aa14.08□□□□□ -0.16
PRPF8-208ENST00000573716 TUBE1Q9UJT0 475 aa14.08□□□□□ -0.16
PRPF8-208ENST00000573716 LRFN2Q9ULH4 789 aa14.08□□□□□ -0.16
PRPF8-208ENST00000573716 USP34Q70CQ2 3546 aa14.08□□□□□ -0.16
PRPF8-208ENST00000573716 CACNA1HO95180 2353 aa14.08□□□□□ -0.16
PRPF8-208ENST00000573716 SDSP20132 328 aa14.07□□□□□ -0.16
PRPF8-208ENST00000573716 ICAM3P32942 547 aa14.07□□□□□ -0.16
PRPF8-208ENST00000573716 TCF7P36402 384 aaPredicted RBP14.07□□□□□ -0.16
PRPF8-208ENST00000573716 GATMP50440 423 aa14.07□□□□□ -0.16
PRPF8-208ENST00000573716 MRPS6P82932 125 aaKnown RBP14.07□□□□□ -0.16
PRPF8-208ENST00000573716 TMEM62Q0P6H9 643 aa14.07□□□□□ -0.16
PRPF8-208ENST00000573716 TRAF1Q13077 416 aa14.07□□□□□ -0.16
PRPF8-208ENST00000573716 CBX2Q14781 532 aaPredicted RBP14.07□□□□□ -0.16
PRPF8-208ENST00000573716 GRIK4Q16099 956 aa14.07□□□□□ -0.16
PRPF8-208ENST00000573716 IMMTQ16891 758 aaKnown RBP14.07□□□□□ -0.16
PRPF8-208ENST00000573716 NAALADL2Q58DX5 795 aa14.07□□□□□ -0.16
PRPF8-208ENST00000573716 CWC27Q6UX04 472 aaKnown RBP14.07□□□□□ -0.16
PRPF8-208ENST00000573716 NPAS4Q8IUM7 802 aa14.07□□□□□ -0.16
PRPF8-208ENST00000573716 LINC01599Q8WXQ3 324 aa14.07□□□□□ -0.16
PRPF8-208ENST00000573716 ZBTB10Q96DT7 871 aa14.07□□□□□ -0.16
PRPF8-208ENST00000573716 MTMR8Q96EF0 704 aa14.07□□□□□ -0.16
PRPF8-208ENST00000573716 INPP4AQ96PE3 977 aaPredicted RBP14.07□□□□□ -0.16
PRPF8-208ENST00000573716 APOL5Q9BWW9 433 aa14.07□□□□□ -0.16
PRPF8-208ENST00000573716 IRF2BPLQ9H1B7 796 aa14.07□□□□□ -0.16
PRPF8-208ENST00000573716 AGO3Q9H9G7 860 aaKnown RBP14.07□□□□□ -0.16
PRPF8-208ENST00000573716 PKD2L1Q9P0L9 805 aa14.07□□□□□ -0.16
PRPF8-208ENST00000573716 CFAP54Q96N23 3096 aa14.06□□□□□ -0.16
PRPF8-208ENST00000573716 STAM2O75886 525 aa14.06□□□□□ -0.16
PRPF8-208ENST00000573716 PDGFBP01127 241 aaPredicted RBP14.06□□□□□ -0.16
PRPF8-208ENST00000573716 STAG3L1P0CL83 205 aa14.06□□□□□ -0.16
PRPF8-208ENST00000573716 NT5C2P49902 561 aa14.06□□□□□ -0.16
PRPF8-208ENST00000573716 PTPN21Q16825 1174 aa14.06□□□□□ -0.16
PRPF8-208ENST00000573716 GLG1Q92896 1179 aa14.06□□□□□ -0.16
PRPF8-208ENST00000573716 ASIC4Q96FT7 647 aa14.06□□□□□ -0.16
PRPF8-208ENST00000573716 DIAPH3Q9NSV4 1193 aa14.06□□□□□ -0.16
PRPF8-208ENST00000573716 PLXNA3P51805 1871 aa14.06□□□□□ -0.16
PRPF8-208ENST00000573716 PTPRZ1P23471 2315 aaPredicted RBP14.06□□□□□ -0.16
PRPF8-208ENST00000573716 PALM3A6NDB9 673 aaPredicted RBP14.05□□□□□ -0.16
PRPF8-208ENST00000573716 M0QZ92 97 aa14.05□□□□□ -0.16
PRPF8-208ENST00000573716 SCG2P13521 617 aa14.05□□□□□ -0.16
PRPF8-208ENST00000573716 SLC35G1Q2M3R5 365 aa14.05□□□□□ -0.16
PRPF8-208ENST00000573716 RTN4RL1Q86UN2 441 aaPredicted RBP14.05□□□□□ -0.16
PRPF8-208ENST00000573716 NLRX1Q86UT6 975 aa14.05□□□□□ -0.16
PRPF8-208ENST00000573716 TICAM2Q86XR7 235 aa14.05□□□□□ -0.16
PRPF8-208ENST00000573716 SMARCC2Q8TAQ2 1214 aa14.05□□□□□ -0.16
PRPF8-208ENST00000573716 NEK1Q96PY6 1258 aa14.05□□□□□ -0.16
PRPF8-208ENST00000573716 LNPKQ9C0E8 428 aa14.05□□□□□ -0.16
PRPF8-208ENST00000573716 CNNM2Q9H8M5 875 aa14.05□□□□□ -0.16
PRPF8-208ENST00000573716 TSHZ2Q9NRE2 1034 aa14.05□□□□□ -0.16
PRPF8-208ENST00000573716 PNMA6FA0A0J9YX94 578 aa14.04□□□□□ -0.16
PRPF8-208ENST00000573716 FOXK2Q01167 660 aa14.04□□□□□ -0.16
PRPF8-208ENST00000573716 PAK2Q13177 524 aa14.04□□□□□ -0.16
PRPF8-208ENST00000573716 IER5Q5VY09 327 aa14.04□□□□□ -0.16
PRPF8-208ENST00000573716 LLGL2Q6P1M3 1020 aa14.04□□□□□ -0.16
PRPF8-208ENST00000573716 VN1R2Q8NFZ6 395 aa14.04□□□□□ -0.16
PRPF8-208ENST00000573716 CUL5Q93034 780 aa14.04□□□□□ -0.16
PRPF8-208ENST00000573716 FTHL17Q9BXU8 183 aa14.04□□□□□ -0.16
PRPF8-208ENST00000573716 ERAP1Q9NZ08 941 aa14.04□□□□□ -0.16
PRPF8-208ENST00000573716 PADI3Q9ULW8 664 aa14.04□□□□□ -0.16
PRPF8-208ENST00000573716 PCDHB12Q9Y5F1 795 aa14.04□□□□□ -0.16
PRPF8-208ENST00000573716 FRMPD4Q14CM0 1322 aa14.04□□□□□ -0.16
PRPF8-208ENST00000573716 SRGAP2BP0DMP2 458 aa14.03□□□□□ -0.16
PRPF8-208ENST00000573716 ATF7P17544 494 aaPredicted RBP14.03□□□□□ -0.16
PRPF8-208ENST00000573716 TECP42680 631 aa14.03□□□□□ -0.16
PRPF8-208ENST00000573716 GRM4Q14833 912 aa14.03□□□□□ -0.16
PRPF8-208ENST00000573716 SEC23AQ15436 765 aa14.03□□□□□ -0.16
PRPF8-208ENST00000573716 MARCH8Q5T0T0 291 aa14.03□□□□□ -0.16
PRPF8-208ENST00000573716 USP17L6PQ6QN14 398 aa14.03□□□□□ -0.16
PRPF8-208ENST00000573716 CYB5R4Q7L1T6 521 aa14.03□□□□□ -0.16
PRPF8-208ENST00000573716 ASCL5Q7RTU5 278 aa14.03□□□□□ -0.16
PRPF8-208ENST00000573716 THNSL1Q8IYQ7 743 aa14.03□□□□□ -0.16
PRPF8-208ENST00000573716 GIMAP8Q8ND71 665 aaPredicted RBP14.03□□□□□ -0.16
PRPF8-208ENST00000573716 SENP7Q9BQF6 1050 aa14.03□□□□□ -0.16
PRPF8-208ENST00000573716 RIOX1Q9H6W3 641 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms