RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 MAP1BP46821 2468 aaKnown RBP11.77□□□□□ -0.53
CHMP6-203ENST00000572525 CFBP00751 764 aa11.77□□□□□ -0.53
CHMP6-203ENST00000572525 PDGFBP01127 241 aaPredicted RBP11.77□□□□□ -0.53
CHMP6-203ENST00000572525 FGAP02671 866 aa11.77□□□□□ -0.53
CHMP6-203ENST00000572525 GHRP10912 638 aa11.77□□□□□ -0.53
CHMP6-203ENST00000572525 CCND2P30279 289 aa11.77□□□□□ -0.53
CHMP6-203ENST00000572525 TRAF1Q13077 416 aa11.77□□□□□ -0.53
CHMP6-203ENST00000572525 GNPTABQ3T906 1256 aa11.77□□□□□ -0.53
CHMP6-203ENST00000572525 RRP12Q5JTH9 1297 aaKnown RBP11.77□□□□□ -0.53
CHMP6-203ENST00000572525 ASTLQ6HA08 431 aaPredicted RBP11.77□□□□□ -0.53
CHMP6-203ENST00000572525 ADSSL1Q8N142 457 aa11.77□□□□□ -0.53
CHMP6-203ENST00000572525 TMEM105Q8N8V8 129 aa11.77□□□□□ -0.53
CHMP6-203ENST00000572525 PNMA1Q8ND90 353 aa11.77□□□□□ -0.53
CHMP6-203ENST00000572525 SENP7Q9BQF6 1050 aa11.77□□□□□ -0.53
CHMP6-203ENST00000572525 AMNQ9BXJ7 453 aa11.77□□□□□ -0.53
CHMP6-203ENST00000572525 UBA5Q9GZZ9 404 aa11.77□□□□□ -0.53
CHMP6-203ENST00000572525 S1PR5Q9H228 398 aa11.77□□□□□ -0.53
CHMP6-203ENST00000572525 RNF41Q9H4P4 317 aaPredicted RBP11.77□□□□□ -0.53
CHMP6-203ENST00000572525 HELLSQ9NRZ9 838 aa11.77□□□□□ -0.53
CHMP6-203ENST00000572525 SETD4Q9NVD3 440 aa11.77□□□□□ -0.53
CHMP6-203ENST00000572525 MBLAC1A4D2B0 266 aaPredicted RBP11.76□□□□□ -0.53
CHMP6-203ENST00000572525 GOLGA8HP0CJ92 632 aa11.76□□□□□ -0.53
CHMP6-203ENST00000572525 VPS53Q5VIR6 699 aa11.76□□□□□ -0.53
CHMP6-203ENST00000572525 TSHZ3Q63HK5 1081 aa11.76□□□□□ -0.53
CHMP6-203ENST00000572525 MFSD6Q6ZSS7 791 aa11.76□□□□□ -0.53
CHMP6-203ENST00000572525 LINC01599Q8WXQ3 324 aa11.76□□□□□ -0.53
CHMP6-203ENST00000572525 ESR2Q92731 530 aa11.76□□□□□ -0.53
CHMP6-203ENST00000572525 MTMR8Q96EF0 704 aa11.76□□□□□ -0.53
CHMP6-203ENST00000572525 NECTIN4Q96NY8 510 aa11.76□□□□□ -0.53
CHMP6-203ENST00000572525 INPP4AQ96PE3 977 aaPredicted RBP11.76□□□□□ -0.53
CHMP6-203ENST00000572525 GPR20Q99678 358 aa11.76□□□□□ -0.53
CHMP6-203ENST00000572525 JMJD4Q9H9V9 463 aa11.76□□□□□ -0.53
CHMP6-203ENST00000572525 AAASQ9NRG9 546 aa11.76□□□□□ -0.53
CHMP6-203ENST00000572525 LZTS1Q9Y250 596 aa11.76□□□□□ -0.53
CHMP6-203ENST00000572525 CHD8Q9HCK8 2581 aa11.76□□□□□ -0.53
CHMP6-203ENST00000572525 FSCN2O14926 492 aa11.75□□□□□ -0.53
CHMP6-203ENST00000572525 MYCLP12524 364 aaPredicted RBP11.75□□□□□ -0.53
CHMP6-203ENST00000572525 ARHGAP4P98171 946 aa11.75□□□□□ -0.53
CHMP6-203ENST00000572525 ANKRD54Q6NXT1 300 aa11.75□□□□□ -0.53
CHMP6-203ENST00000572525 FRMD5Q7Z6J6 570 aa11.75□□□□□ -0.53
CHMP6-203ENST00000572525 ZBTB33Q86T24 672 aa11.75□□□□□ -0.53
CHMP6-203ENST00000572525 IQCA1Q86XH1 822 aa11.75□□□□□ -0.53
CHMP6-203ENST00000572525 KREMEN2Q8NCW0 462 aa11.75□□□□□ -0.53
CHMP6-203ENST00000572525 VN1R2Q8NFZ6 395 aa11.75□□□□□ -0.53
CHMP6-203ENST00000572525 IL31RAQ8NI17 732 aa11.75□□□□□ -0.53
CHMP6-203ENST00000572525 CPVLQ9H3G5 476 aa11.75□□□□□ -0.53
CHMP6-203ENST00000572525 PCDHB12Q9Y5F1 795 aa11.75□□□□□ -0.53
CHMP6-203ENST00000572525 WDR81Q562E7 1941 aa11.75□□□□□ -0.53
CHMP6-203ENST00000572525 MYH9P35579 1960 aaKnown RBP11.75□□□□□ -0.53
CHMP6-203ENST00000572525 CACNA1GO43497 2377 aa11.75□□□□□ -0.53
CHMP6-203ENST00000572525 CFAP47Q6ZTR5 3102 aa11.74□□□□□ -0.53
CHMP6-203ENST00000572525 SPATA31C2B4DYI2 1134 aa11.74□□□□□ -0.53
CHMP6-203ENST00000572525 FIBPO43427 364 aa11.74□□□□□ -0.53
CHMP6-203ENST00000572525 BRD1O95696 1058 aa11.74□□□□□ -0.53
CHMP6-203ENST00000572525 SCG2P13521 617 aa11.74□□□□□ -0.53
CHMP6-203ENST00000572525 SYCE2Q6PIF2 218 aa11.74□□□□□ -0.53
CHMP6-203ENST00000572525 RBM23Q86U06 439 aaKnown RBP11.74□□□□□ -0.53
CHMP6-203ENST00000572525 GIMAP8Q8ND71 665 aaPredicted RBP11.74□□□□□ -0.53
CHMP6-203ENST00000572525 TUBE1Q9UJT0 475 aa11.74□□□□□ -0.53
CHMP6-203ENST00000572525 KDM3AQ9Y4C1 1321 aa11.74□□□□□ -0.53
CHMP6-203ENST00000572525 C2orf16Q68DN1 1984 aa11.74□□□□□ -0.53
CHMP6-203ENST00000572525 ZBTB5O15062 677 aa11.73□□□□□ -0.53
CHMP6-203ENST00000572525 PARP1P09874 1014 aaKnown RBP11.73□□□□□ -0.53
CHMP6-203ENST00000572525 MRPS6P82932 125 aaKnown RBP11.73□□□□□ -0.53
CHMP6-203ENST00000572525 ITIH3Q06033 890 aa11.73□□□□□ -0.53
CHMP6-203ENST00000572525 PUM1Q14671 1186 aaKnown RBP eCLIP11.73□□□□□ -0.53
CHMP6-203ENST00000572525 TPRNQ4KMQ1 711 aa11.73□□□□□ -0.53
CHMP6-203ENST00000572525 IER5Q5VY09 327 aa11.73□□□□□ -0.53
CHMP6-203ENST00000572525 XRRA1Q6P2D8 792 aa11.73□□□□□ -0.53
CHMP6-203ENST00000572525 RTN4RL1Q86UN2 441 aaPredicted RBP11.73□□□□□ -0.53
CHMP6-203ENST00000572525 ZDHHC14Q8IZN3 488 aa11.73□□□□□ -0.53
CHMP6-203ENST00000572525 GPKOWQ92917 476 aaPredicted RBP eCLIP11.73□□□□□ -0.53
CHMP6-203ENST00000572525 EVI5LQ96CN4 794 aa11.73□□□□□ -0.53
CHMP6-203ENST00000572525 KAT14Q9H8E8 782 aa11.73□□□□□ -0.53
CHMP6-203ENST00000572525 AGO3Q9H9G7 860 aaKnown RBP11.73□□□□□ -0.53
CHMP6-203ENST00000572525 CACNA1IQ9P0X4 2223 aa11.73□□□□□ -0.53
CHMP6-203ENST00000572525 USP24Q9UPU5 2620 aa11.73□□□□□ -0.53
CHMP6-203ENST00000572525 IGSF9BQ9UPX0 1349 aa11.73□□□□□ -0.53
CHMP6-203ENST00000572525 USTQ9Y2C2 406 aa11.73□□□□□ -0.53
CHMP6-203ENST00000572525 PCDHGC5Q9Y5F6 944 aa11.73□□□□□ -0.53
CHMP6-203ENST00000572525 CDY2AQ9Y6F7 541 aa11.73□□□□□ -0.53
CHMP6-203ENST00000572525 BAHCC1Q9P281 2608 aa11.73□□□□□ -0.53
CHMP6-203ENST00000572525 DOCK8Q8NF50 2099 aa11.72□□□□□ -0.53
CHMP6-203ENST00000572525 SALL3Q9BXA9 1300 aa11.72□□□□□ -0.53
CHMP6-203ENST00000572525 GCOM1H8Y6P7 765 aaPredicted RBP11.72□□□□□ -0.53
CHMP6-203ENST00000572525 RBAK-RBAKDNI3L0D1 243 aa11.72□□□□□ -0.53
CHMP6-203ENST00000572525 POLR2MP0CAP2 368 aa11.72□□□□□ -0.53
CHMP6-203ENST00000572525 MX1P20591 662 aa11.72□□□□□ -0.53
CHMP6-203ENST00000572525 SARSP49591 514 aaKnown RBP11.72□□□□□ -0.53
CHMP6-203ENST00000572525 MRPS9P82933 396 aaKnown RBP11.72□□□□□ -0.53
CHMP6-203ENST00000572525 PLCB3Q01970 1234 aa11.72□□□□□ -0.53
CHMP6-203ENST00000572525 PPFIA1Q13136 1202 aa11.72□□□□□ -0.53
CHMP6-203ENST00000572525 SEMA3FQ13275 785 aa11.72□□□□□ -0.53
CHMP6-203ENST00000572525 MCMDC2Q4G0Z9 681 aa11.72□□□□□ -0.53
CHMP6-203ENST00000572525 RUFY4Q6ZNE9 571 aa11.72□□□□□ -0.53
CHMP6-203ENST00000572525 CYFIP1Q7L576 1253 aa11.72□□□□□ -0.53
CHMP6-203ENST00000572525 TRIM50Q86XT4 487 aa11.72□□□□□ -0.53
CHMP6-203ENST00000572525 CCDC105Q8IYK2 499 aa11.72□□□□□ -0.53
CHMP6-203ENST00000572525 PLCD3Q8N3E9 789 aa11.72□□□□□ -0.53
CHMP6-203ENST00000572525 MICAL1Q8TDZ2 1067 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms