RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 GJA10Q969M2 543 aa18.26■□□□□ 0.51
LITAF-210ENST00000571976 PPP1R12CQ9BZL4 782 aa18.26■□□□□ 0.51
LITAF-210ENST00000571976 UNC45AQ9H3U1 944 aa18.26■□□□□ 0.51
LITAF-210ENST00000571976 ZNF302Q9NR11 478 aa18.26■□□□□ 0.51
LITAF-210ENST00000571976 DISC1Q9NRI5 854 aa18.26■□□□□ 0.51
LITAF-210ENST00000571976 SETD4Q9NVD3 440 aa18.26■□□□□ 0.51
LITAF-210ENST00000571976 PCDH10Q9P2E7 1040 aa18.26■□□□□ 0.51
LITAF-210ENST00000571976 COLQQ9Y215 455 aaPredicted RBP18.26■□□□□ 0.51
LITAF-210ENST00000571976 SAMM50Q9Y512 469 aa18.26■□□□□ 0.51
LITAF-210ENST00000571976 KIF28PB7ZC32 967 aa18.25■□□□□ 0.51
LITAF-210ENST00000571976 CHMP2AO43633 222 aa18.25■□□□□ 0.51
LITAF-210ENST00000571976 PDCP20941 246 aa18.25■□□□□ 0.51
LITAF-210ENST00000571976 TRAPPC10P48553 1259 aa18.25■□□□□ 0.51
LITAF-210ENST00000571976 ZNF200P98182 395 aaPredicted RBP18.25■□□□□ 0.51
LITAF-210ENST00000571976 BFSP2Q13515 415 aa18.25■□□□□ 0.51
LITAF-210ENST00000571976 HIC1Q14526 733 aa18.25■□□□□ 0.51
LITAF-210ENST00000571976 MCTP1Q6DN14 999 aa18.25■□□□□ 0.51
LITAF-210ENST00000571976 PDXDC2PQ6P474 469 aa18.25■□□□□ 0.51
LITAF-210ENST00000571976 B3GNT9Q6UX72 402 aa18.25■□□□□ 0.51
LITAF-210ENST00000571976 CCDC60Q8IWA6 550 aaPredicted RBP18.25■□□□□ 0.51
LITAF-210ENST00000571976 TMEM199Q8N511 208 aa18.25■□□□□ 0.51
LITAF-210ENST00000571976 CCDC155Q8N6L0 562 aa18.25■□□□□ 0.51
LITAF-210ENST00000571976 HAS1Q92839 578 aa18.25■□□□□ 0.51
LITAF-210ENST00000571976 ATP6V0A1Q93050 837 aa18.25■□□□□ 0.51
LITAF-210ENST00000571976 CTAGE1Q96RT6 745 aa18.25■□□□□ 0.51
LITAF-210ENST00000571976 UBE2OQ9C0C9 1292 aaKnown RBP18.25■□□□□ 0.51
LITAF-210ENST00000571976 PRO3102Q9H379 93 aa18.25■□□□□ 0.51
LITAF-210ENST00000571976 NOL7Q9UMY1 257 aaKnown RBP18.25■□□□□ 0.51
LITAF-210ENST00000571976 MAFBQ9Y5Q3 323 aaPredicted RBP18.25■□□□□ 0.51
LITAF-210ENST00000571976 LTBP2Q14767 1821 aa18.25■□□□□ 0.51
LITAF-210ENST00000571976 PITPNM1O00562 1244 aa18.24■□□□□ 0.51
LITAF-210ENST00000571976 NEMFO60524 1076 aa18.24■□□□□ 0.51
LITAF-210ENST00000571976 ATP2B1P20020 1258 aa18.24■□□□□ 0.51
LITAF-210ENST00000571976 CYP2C18P33260 490 aa18.24■□□□□ 0.51
LITAF-210ENST00000571976 FPGSQ05932 587 aa18.24■□□□□ 0.51
LITAF-210ENST00000571976 PPFIA1Q13136 1202 aa18.24■□□□□ 0.51
LITAF-210ENST00000571976 ORC2Q13416 577 aaPredicted RBP18.24■□□□□ 0.51
LITAF-210ENST00000571976 PLCB4Q15147 1175 aa18.24■□□□□ 0.51
LITAF-210ENST00000571976 CALCRLQ16602 461 aa18.24■□□□□ 0.51
LITAF-210ENST00000571976 MIER3Q7Z3K6 550 aa18.24■□□□□ 0.51
LITAF-210ENST00000571976 RETREG2Q8NC44 543 aa18.24■□□□□ 0.51
LITAF-210ENST00000571976 CAGE1Q8TC20 777 aa18.24■□□□□ 0.51
LITAF-210ENST00000571976 TRPC6Q9Y210 931 aa18.24■□□□□ 0.51
LITAF-210ENST00000571976 POTEB3A0JP26 581 aa18.23■□□□□ 0.51
LITAF-210ENST00000571976 RRN3P2A6NIE6 340 aa18.23■□□□□ 0.51
LITAF-210ENST00000571976 WNT7AO00755 349 aa18.23■□□□□ 0.51
LITAF-210ENST00000571976 TREHO43280 583 aa18.23■□□□□ 0.51
LITAF-210ENST00000571976 MCM7P33993 719 aa18.23■□□□□ 0.51
LITAF-210ENST00000571976 ADAM17P78536 824 aa18.23■□□□□ 0.51
LITAF-210ENST00000571976 RBL2Q08999 1139 aa18.23■□□□□ 0.51
LITAF-210ENST00000571976 PPP2R5CQ13362 524 aa18.23■□□□□ 0.51
LITAF-210ENST00000571976 POTEBQ6S5H4 581 aa18.23■□□□□ 0.51
LITAF-210ENST00000571976 SERINC5Q86VE9 423 aa18.23■□□□□ 0.51
LITAF-210ENST00000571976 CKAP2LQ8IYA6 745 aa18.23■□□□□ 0.51
LITAF-210ENST00000571976 ATP8B4Q8TF62 1192 aa18.23■□□□□ 0.51
LITAF-210ENST00000571976 LMBR1Q8WVP7 490 aa18.23■□□□□ 0.51
LITAF-210ENST00000571976 GABBR1Q9UBS5 961 aa18.23■□□□□ 0.51
LITAF-210ENST00000571976 VAV3Q9UKW4 847 aa18.23■□□□□ 0.51
LITAF-210ENST00000571976 UMODL1Q5DID0 1318 aa18.23■□□□□ 0.51
LITAF-210ENST00000571976 A0A1W2PPC1 479 aa18.22■□□□□ 0.51
LITAF-210ENST00000571976 HBP1O60381 514 aa18.22■□□□□ 0.51
LITAF-210ENST00000571976 INSRRP14616 1297 aa18.22■□□□□ 0.51
LITAF-210ENST00000571976 CSF2RAP15509 400 aa18.22■□□□□ 0.51
LITAF-210ENST00000571976 CCL23P55773 120 aa18.22■□□□□ 0.51
LITAF-210ENST00000571976 PPIGQ13427 754 aaKnown RBP eCLIP18.22■□□□□ 0.51
LITAF-210ENST00000571976 GRIK4Q16099 956 aa18.22■□□□□ 0.51
LITAF-210ENST00000571976 TTC38Q5R3I4 469 aa18.22■□□□□ 0.51
LITAF-210ENST00000571976 DHX38Q92620 1227 aaKnown RBP18.22■□□□□ 0.51
LITAF-210ENST00000571976 MTMR9Q96QG7 549 aa18.22■□□□□ 0.51
LITAF-210ENST00000571976 WNT8AQ9H1J5 351 aa18.22■□□□□ 0.51
LITAF-210ENST00000571976 PCDHA12Q9UN75 941 aa18.22■□□□□ 0.51
LITAF-210ENST00000571976 IGSF9BQ9UPX0 1349 aa18.22■□□□□ 0.51
LITAF-210ENST00000571976 IQCF3P0C7M6 154 aa18.21■□□□□ 0.51
LITAF-210ENST00000571976 ATP4AP20648 1035 aa18.21■□□□□ 0.51
LITAF-210ENST00000571976 ZNF174Q15697 407 aa18.21■□□□□ 0.51
LITAF-210ENST00000571976 BBXQ8WY36 941 aaPredicted RBP18.21■□□□□ 0.51
LITAF-210ENST00000571976 MBLAC1A4D2B0 266 aaPredicted RBP18.2■□□□□ 0.5
LITAF-210ENST00000571976 CKBP12277 381 aa18.2■□□□□ 0.5
LITAF-210ENST00000571976 RFC2P35250 354 aa18.2■□□□□ 0.5
LITAF-210ENST00000571976 TXKP42681 527 aa18.2■□□□□ 0.5
LITAF-210ENST00000571976 TOB1P50616 345 aaPredicted RBP18.2■□□□□ 0.5
LITAF-210ENST00000571976 IGBP1P78318 339 aa18.2■□□□□ 0.5
LITAF-210ENST00000571976 TRIM71Q2Q1W2 868 aaKnown RBP18.2■□□□□ 0.5
LITAF-210ENST00000571976 RILPL1Q5EBL4 403 aa18.2■□□□□ 0.5
LITAF-210ENST00000571976 ZNF484Q5JVG2 852 aa18.2■□□□□ 0.5
LITAF-210ENST00000571976 MARCH8Q5T0T0 291 aa18.2■□□□□ 0.5
LITAF-210ENST00000571976 TAF2Q6P1X5 1199 aa18.2■□□□□ 0.5
LITAF-210ENST00000571976 RPUSD2Q8IZ73 545 aaKnown RBP18.2■□□□□ 0.5
LITAF-210ENST00000571976 FAM167AQ96KS9 214 aa18.2■□□□□ 0.5
LITAF-210ENST00000571976 TMEM60Q9H2L4 133 aa18.2■□□□□ 0.5
LITAF-210ENST00000571976 TTC12Q9H892 705 aaPredicted RBP18.2■□□□□ 0.5
LITAF-210ENST00000571976 NRBP2Q9NSY0 501 aa18.2■□□□□ 0.5
LITAF-210ENST00000571976 FOXD4L1Q9NU39 408 aa18.2■□□□□ 0.5
LITAF-210ENST00000571976 TUBE1Q9UJT0 475 aa18.2■□□□□ 0.5
LITAF-210ENST00000571976 RANBP2P49792 3224 aaKnown RBP18.19■□□□□ 0.5
LITAF-210ENST00000571976 COL1A2P08123 1366 aa18.19■□□□□ 0.5
LITAF-210ENST00000571976 EML1O00423 815 aa18.19■□□□□ 0.5
LITAF-210ENST00000571976 ZNF862O60290 1169 aa18.19■□□□□ 0.5
LITAF-210ENST00000571976 CAND2O75155 1236 aa18.19■□□□□ 0.5
LITAF-210ENST00000571976 PARNO95453 639 aaKnown RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms