RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 CCDC66A2RUB6 948 aa5.94□□□□□ -1.46
NUP88-202ENST00000570937 ZNF561-AS1K7EIQ3 104 aa5.94□□□□□ -1.46
NUP88-202ENST00000570937 RASGRP1O95267 797 aa5.94□□□□□ -1.46
NUP88-202ENST00000570937 NPTXRO95502 500 aa5.94□□□□□ -1.46
NUP88-202ENST00000570937 APPP05067 770 aa5.94□□□□□ -1.46
NUP88-202ENST00000570937 SRGAP2CP0DJJ0 459 aa5.94□□□□□ -1.46
NUP88-202ENST00000570937 PDE6AP16499 860 aa5.94□□□□□ -1.46
NUP88-202ENST00000570937 HOXA5P20719 270 aa5.94□□□□□ -1.46
NUP88-202ENST00000570937 ST5P78524 1137 aa5.94□□□□□ -1.46
NUP88-202ENST00000570937 GRIN1Q05586 938 aa5.94□□□□□ -1.46
NUP88-202ENST00000570937 CRY1Q16526 586 aa5.94□□□□□ -1.46
NUP88-202ENST00000570937 FIGNQ5HY92 759 aa5.94□□□□□ -1.46
NUP88-202ENST00000570937 BRAPQ7Z569 592 aa5.94□□□□□ -1.46
NUP88-202ENST00000570937 STK32CQ86UX6 486 aa5.94□□□□□ -1.46
NUP88-202ENST00000570937 WRNIP1Q96S55 665 aa5.94□□□□□ -1.46
NUP88-202ENST00000570937 CELF4Q9BZC1 486 aaKnown RBP5.94□□□□□ -1.46
NUP88-202ENST00000570937 ACOT7O00154 380 aa5.93□□□□□ -1.46
NUP88-202ENST00000570937 MAN2B1O00754 1011 aa5.93□□□□□ -1.46
NUP88-202ENST00000570937 KCNA6P17658 529 aa5.93□□□□□ -1.46
NUP88-202ENST00000570937 FAM26FQ5R3K3 315 aa5.93□□□□□ -1.46
NUP88-202ENST00000570937 OSTM1Q86WC4 334 aa5.93□□□□□ -1.46
NUP88-202ENST00000570937 SYNPOQ8N3V7 929 aa5.93□□□□□ -1.46
NUP88-202ENST00000570937 CLIC6Q96NY7 704 aa5.93□□□□□ -1.46
NUP88-202ENST00000570937 SPATA25Q9BR10 227 aa5.93□□□□□ -1.46
NUP88-202ENST00000570937 CD244Q9BZW8 370 aa5.93□□□□□ -1.46
NUP88-202ENST00000570937 SMURF1Q9HCE7 757 aa5.93□□□□□ -1.46
NUP88-202ENST00000570937 UGGT2Q9NYU1 1516 aa5.93□□□□□ -1.46
NUP88-202ENST00000570937 OTOL1A6NHN0 477 aaPredicted RBP5.92□□□□□ -1.46
NUP88-202ENST00000570937 CYP7B1O75881 506 aa5.92□□□□□ -1.46
NUP88-202ENST00000570937 ZNF28P17035 718 aa5.92□□□□□ -1.46
NUP88-202ENST00000570937 GJA4P35212 333 aa5.92□□□□□ -1.46
NUP88-202ENST00000570937 JAM2P57087 298 aa5.92□□□□□ -1.46
NUP88-202ENST00000570937 RTP5Q14D33 572 aa5.92□□□□□ -1.46
NUP88-202ENST00000570937 CD276Q5ZPR3 534 aa5.92□□□□□ -1.46
NUP88-202ENST00000570937 VASNQ6EMK4 673 aa5.92□□□□□ -1.46
NUP88-202ENST00000570937 HHIPL2Q6UWX4 724 aa5.92□□□□□ -1.46
NUP88-202ENST00000570937 FGD2Q7Z6J4 655 aa5.92□□□□□ -1.46
NUP88-202ENST00000570937 ZNF761Q86XN6 746 aaPredicted RBP5.92□□□□□ -1.46
NUP88-202ENST00000570937 DTX3Q8N9I9 347 aa5.92□□□□□ -1.46
NUP88-202ENST00000570937 SYT8Q8NBV8 401 aa5.92□□□□□ -1.46
NUP88-202ENST00000570937 FEZF2Q8TBJ5 459 aa5.92□□□□□ -1.46
NUP88-202ENST00000570937 ADAMTS17Q8TE56 1095 aa5.92□□□□□ -1.46
NUP88-202ENST00000570937 C20orf173Q96LM9 149 aa5.92□□□□□ -1.46
NUP88-202ENST00000570937 RNPC3Q96LT9 517 aaKnown RBP5.92□□□□□ -1.46
NUP88-202ENST00000570937 CLUHP3Q96NS8 147 aa5.92□□□□□ -1.46
NUP88-202ENST00000570937 DLL4Q9NR61 685 aa5.92□□□□□ -1.46
NUP88-202ENST00000570937 DISP1Q96F81 1524 aa5.91□□□□□ -1.46
NUP88-202ENST00000570937 A0A0G2JLL6 359 aaPredicted RBP5.91□□□□□ -1.46
NUP88-202ENST00000570937 FAM90A27PA6NNH2 459 aa5.91□□□□□ -1.46
NUP88-202ENST00000570937 NOBOXO60393 691 aa5.91□□□□□ -1.46
NUP88-202ENST00000570937 CLASP2O75122 1294 aaKnown RBP5.91□□□□□ -1.46
NUP88-202ENST00000570937 RFPL3O75679 317 aa5.91□□□□□ -1.46
NUP88-202ENST00000570937 RAPGEF3O95398 923 aa5.91□□□□□ -1.46
NUP88-202ENST00000570937 ENO2P09104 434 aaPredicted RBP5.91□□□□□ -1.46
NUP88-202ENST00000570937 PTPN1P18031 435 aaKnown RBP5.91□□□□□ -1.46
NUP88-202ENST00000570937 RANGAP1P46060 587 aaPredicted RBP5.91□□□□□ -1.46
NUP88-202ENST00000570937 DNM2P50570 870 aa5.91□□□□□ -1.46
NUP88-202ENST00000570937 BTBD8Q5XKL5 378 aa5.91□□□□□ -1.46
NUP88-202ENST00000570937 TMC5Q6UXY8 1006 aa5.91□□□□□ -1.46
NUP88-202ENST00000570937 OVCH1Q7RTY7 1134 aa5.91□□□□□ -1.46
NUP88-202ENST00000570937 FRMD5Q7Z6J6 570 aa5.91□□□□□ -1.46
NUP88-202ENST00000570937 PTRH1Q86Y79 214 aaKnown RBP5.91□□□□□ -1.46
NUP88-202ENST00000570937 RTEL1Q9NZ71 1219 aa5.91□□□□□ -1.46
NUP88-202ENST00000570937 RBPJLQ9UBG7 517 aa5.91□□□□□ -1.46
NUP88-202ENST00000570937 ATP23Q9Y6H3 246 aa5.91□□□□□ -1.46
NUP88-202ENST00000570937 UACAQ9BZF9 1416 aa5.91□□□□□ -1.46
NUP88-202ENST00000570937 KIF21BO75037 1637 aa5.9□□□□□ -1.46
NUP88-202ENST00000570937 ESYT3A0FGR9 886 aa5.9□□□□□ -1.46
NUP88-202ENST00000570937 ZNF839A8K0R7 811 aa5.9□□□□□ -1.46
NUP88-202ENST00000570937 CHGBP05060 677 aa5.9□□□□□ -1.46
NUP88-202ENST00000570937 DBPQ10586 325 aaPredicted RBP5.9□□□□□ -1.46
NUP88-202ENST00000570937 NT5DC1Q5TFE4 455 aa5.9□□□□□ -1.46
NUP88-202ENST00000570937 ABHD17CQ6PCB6 329 aa5.9□□□□□ -1.46
NUP88-202ENST00000570937 LILRA6Q6PI73 481 aa5.9□□□□□ -1.46
NUP88-202ENST00000570937 ZSWIM3Q96MP5 696 aa5.9□□□□□ -1.46
NUP88-202ENST00000570937 TEPSINQ96N21 525 aa5.9□□□□□ -1.46
NUP88-202ENST00000570937 COQ6Q9Y2Z9 468 aa5.9□□□□□ -1.46
NUP88-202ENST00000570937 CTTNBP2Q8WZ74 1663 aa5.9□□□□□ -1.47
NUP88-202ENST00000570937 UHRF1BP1LA0JNW5 1464 aa5.9□□□□□ -1.47
NUP88-202ENST00000570937 KIAA0556O60303 1618 aa5.89□□□□□ -1.47
NUP88-202ENST00000570937 C9orf118A6NHY6 69 aa5.89□□□□□ -1.47
NUP88-202ENST00000570937 B4E1Z4 1266 aa5.89□□□□□ -1.47
NUP88-202ENST00000570937 DDX3XO00571 662 aaKnown RBP eCLIP5.89□□□□□ -1.47
NUP88-202ENST00000570937 PPP1R12AO14974 1030 aaPredicted RBP5.89□□□□□ -1.47
NUP88-202ENST00000570937 ASMTLO95671 621 aa5.89□□□□□ -1.47
NUP88-202ENST00000570937 ASLP04424 464 aa5.89□□□□□ -1.47
NUP88-202ENST00000570937 COL6A1P12109 1028 aa5.89□□□□□ -1.47
NUP88-202ENST00000570937 KRT15P19012 456 aa5.89□□□□□ -1.47
NUP88-202ENST00000570937 IL13P35225 146 aa5.89□□□□□ -1.47
NUP88-202ENST00000570937 IGFALSP35858 605 aa5.89□□□□□ -1.47
NUP88-202ENST00000570937 MLLT6P55198 1093 aaPredicted RBP5.89□□□□□ -1.47
NUP88-202ENST00000570937 PFKPQ01813 784 aa5.89□□□□□ -1.47
NUP88-202ENST00000570937 TCEA2Q15560 299 aa5.89□□□□□ -1.47
NUP88-202ENST00000570937 SKIDA1Q1XH10 827 aa5.89□□□□□ -1.47
NUP88-202ENST00000570937 TMEM177Q53S58 311 aa5.89□□□□□ -1.47
NUP88-202ENST00000570937 ZFYVE27Q5T4F4 411 aa5.89□□□□□ -1.47
NUP88-202ENST00000570937 EP400NLQ6ZTU2 488 aa5.89□□□□□ -1.47
NUP88-202ENST00000570937 HOMER1Q86YM7 354 aa5.89□□□□□ -1.47
NUP88-202ENST00000570937 NOSTRINQ8IVI9 506 aa5.89□□□□□ -1.47
NUP88-202ENST00000570937 TXNDC5Q8NBS9 432 aaKnown RBP5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms