RNA–Protein interactions for RNA: ENST00000570616.1

SLC12A4-205, Transcript of solute carrier family 12 member 4, humanhuman

TSL 3

Gene SLC12A4, Length 406 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-205ENST00000570616 CCL23P55773 120 aa25.81■■□□□ 1.72
SLC12A4-205ENST00000570616 ADAM17P78536 824 aa25.81■■□□□ 1.72
SLC12A4-205ENST00000570616 PPFIA1Q13136 1202 aa25.81■■□□□ 1.72
SLC12A4-205ENST00000570616 CCDC60Q8IWA6 550 aaPredicted RBP25.81■■□□□ 1.72
SLC12A4-205ENST00000570616 RETREG2Q8NC44 543 aa25.81■■□□□ 1.72
SLC12A4-205ENST00000570616 LMBR1Q8WVP7 490 aa25.81■■□□□ 1.72
SLC12A4-205ENST00000570616 ATP6V0A1Q93050 837 aa25.81■■□□□ 1.72
SLC12A4-205ENST00000570616 KCNMB3Q9NPA1 279 aa25.81■■□□□ 1.72
SLC12A4-205ENST00000570616 SETD4Q9NVD3 440 aa25.81■■□□□ 1.72
SLC12A4-205ENST00000570616 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.81■■□□□ 1.72
SLC12A4-205ENST00000570616 PCDHA10Q9Y5I2 948 aa25.81■■□□□ 1.72
SLC12A4-205ENST00000570616 PSAPP07602 524 aa25.8■■□□□ 1.72
SLC12A4-205ENST00000570616 TNPO1Q92973 898 aaKnown RBP25.8■■□□□ 1.72
SLC12A4-205ENST00000570616 GJA10Q969M2 543 aa25.8■■□□□ 1.72
SLC12A4-205ENST00000570616 FAM20AQ96MK3 541 aa25.8■■□□□ 1.72
SLC12A4-205ENST00000570616 ZNF302Q9NR11 478 aa25.8■■□□□ 1.72
SLC12A4-205ENST00000570616 TBX3O15119 743 aa25.79■■□□□ 1.72
SLC12A4-205ENST00000570616 SFNP31947 248 aa25.79■■□□□ 1.72
SLC12A4-205ENST00000570616 JAK3P52333 1124 aa25.79■■□□□ 1.72
SLC12A4-205ENST00000570616 CUL4AQ13619 759 aa25.79■■□□□ 1.72
SLC12A4-205ENST00000570616 PLCB4Q15147 1175 aa25.79■■□□□ 1.72
SLC12A4-205ENST00000570616 TRIM71Q2Q1W2 868 aaKnown RBP25.79■■□□□ 1.72
SLC12A4-205ENST00000570616 B3GNT9Q6UX72 402 aa25.79■■□□□ 1.72
SLC12A4-205ENST00000570616 RDM1Q8NG50 284 aa25.79■■□□□ 1.72
SLC12A4-205ENST00000570616 UNC45AQ9H3U1 944 aa25.79■■□□□ 1.72
SLC12A4-205ENST00000570616 IL23AQ9NPF7 189 aa25.79■■□□□ 1.72
SLC12A4-205ENST00000570616 TREHO43280 583 aa25.78■■□□□ 1.72
SLC12A4-205ENST00000570616 IQCF3P0C7M6 154 aa25.78■■□□□ 1.72
SLC12A4-205ENST00000570616 GJB2P29033 226 aa25.78■■□□□ 1.72
SLC12A4-205ENST00000570616 GRIK4Q16099 956 aa25.78■■□□□ 1.72
SLC12A4-205ENST00000570616 C9orf50Q5SZB4 431 aa25.78■■□□□ 1.72
SLC12A4-205ENST00000570616 SWSAP1Q6NVH7 229 aa25.78■■□□□ 1.72
SLC12A4-205ENST00000570616 PDXDC2PQ6P474 469 aa25.78■■□□□ 1.72
SLC12A4-205ENST00000570616 WNT8BQ93098 351 aa25.78■■□□□ 1.72
SLC12A4-205ENST00000570616 SCLYQ96I15 445 aa25.78■■□□□ 1.72
SLC12A4-205ENST00000570616 DISC1Q9NRI5 854 aa25.78■■□□□ 1.72
SLC12A4-205ENST00000570616 SMC3Q9UQE7 1217 aa25.78■■□□□ 1.72
SLC12A4-205ENST00000570616 TRPC6Q9Y210 931 aa25.78■■□□□ 1.72
SLC12A4-205ENST00000570616 SAMM50Q9Y512 469 aa25.78■■□□□ 1.72
SLC12A4-205ENST00000570616 CHMP2AO43633 222 aa25.77■■□□□ 1.72
SLC12A4-205ENST00000570616 CKBP12277 381 aa25.77■■□□□ 1.72
SLC12A4-205ENST00000570616 SELPP16109 830 aa25.77■■□□□ 1.72
SLC12A4-205ENST00000570616 RFC2P35250 354 aa25.77■■□□□ 1.72
SLC12A4-205ENST00000570616 SHHQ15465 462 aa25.77■■□□□ 1.72
SLC12A4-205ENST00000570616 PSRC1Q6PGN9 363 aaPredicted RBP25.77■■□□□ 1.72
SLC12A4-205ENST00000570616 LRRC8DQ7L1W4 858 aa25.77■■□□□ 1.72
SLC12A4-205ENST00000570616 POTEDQ86YR6 584 aa25.77■■□□□ 1.72
SLC12A4-205ENST00000570616 MAFBQ9Y5Q3 323 aaPredicted RBP25.77■■□□□ 1.72
SLC12A4-205ENST00000570616 IGSF9BQ9UPX0 1349 aa25.77■■□□□ 1.72
SLC12A4-205ENST00000570616 RANBP2P49792 3224 aaKnown RBP25.76■■□□□ 1.72
SLC12A4-205ENST00000570616 POTEB3A0JP26 581 aa25.76■■□□□ 1.71
SLC12A4-205ENST00000570616 MBLAC1A4D2B0 266 aaPredicted RBP25.76■■□□□ 1.71
SLC12A4-205ENST00000570616 RRN3P2A6NIE6 340 aa25.76■■□□□ 1.71
SLC12A4-205ENST00000570616 PFKMP08237 780 aa25.76■■□□□ 1.71
SLC12A4-205ENST00000570616 INSRRP14616 1297 aa25.76■■□□□ 1.71
SLC12A4-205ENST00000570616 GNL2Q13823 731 aaKnown RBP25.76■■□□□ 1.71
SLC12A4-205ENST00000570616 LRIT3Q3SXY7 679 aa25.76■■□□□ 1.71
SLC12A4-205ENST00000570616 POTEBQ6S5H4 581 aa25.76■■□□□ 1.71
SLC12A4-205ENST00000570616 C16orf59Q7L2K0 433 aa25.76■■□□□ 1.71
SLC12A4-205ENST00000570616 NOSTRINQ8IVI9 506 aa25.76■■□□□ 1.71
SLC12A4-205ENST00000570616 ATP8B4Q8TF62 1192 aa25.76■■□□□ 1.71
SLC12A4-205ENST00000570616 HAS1Q92839 578 aa25.76■■□□□ 1.71
SLC12A4-205ENST00000570616 TRIOBPQ9H2D6 2365 aa25.75■■□□□ 1.71
SLC12A4-205ENST00000570616 HBP1O60381 514 aa25.75■■□□□ 1.71
SLC12A4-205ENST00000570616 CAND2O75155 1236 aa25.75■■□□□ 1.71
SLC12A4-205ENST00000570616 PARNO95453 639 aaKnown RBP25.75■■□□□ 1.71
SLC12A4-205ENST00000570616 U2AF2P26368 475 aaKnown RBP eCLIP25.75■■□□□ 1.71
SLC12A4-205ENST00000570616 PPP2R5CQ13362 524 aa25.75■■□□□ 1.71
SLC12A4-205ENST00000570616 TMEM240Q5SV17 173 aa25.75■■□□□ 1.71
SLC12A4-205ENST00000570616 TAF2Q6P1X5 1199 aa25.75■■□□□ 1.71
SLC12A4-205ENST00000570616 MIER3Q7Z3K6 550 aa25.75■■□□□ 1.71
SLC12A4-205ENST00000570616 SLFN12Q8IYM2 578 aa25.75■■□□□ 1.71
SLC12A4-205ENST00000570616 RPUSD2Q8IZ73 545 aaKnown RBP25.75■■□□□ 1.71
SLC12A4-205ENST00000570616 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.75■■□□□ 1.713e-19■■■□□ 17
SLC12A4-205ENST00000570616 GABBR1Q9UBS5 961 aa25.75■■□□□ 1.71
SLC12A4-205ENST00000570616 TUBE1Q9UJT0 475 aa25.75■■□□□ 1.71
SLC12A4-205ENST00000570616 VAV3Q9UKW4 847 aa25.75■■□□□ 1.71
SLC12A4-205ENST00000570616 KIF28PB7ZC32 967 aa25.74■■□□□ 1.71
SLC12A4-205ENST00000570616 WNT7AO00755 349 aa25.74■■□□□ 1.71
SLC12A4-205ENST00000570616 NEMFO60524 1076 aa25.74■■□□□ 1.71
SLC12A4-205ENST00000570616 ACRP10323 421 aa25.74■■□□□ 1.71
SLC12A4-205ENST00000570616 MARCH8Q5T0T0 291 aa25.74■■□□□ 1.71
SLC12A4-205ENST00000570616 VWCEQ96DN2 955 aa25.74■■□□□ 1.71
SLC12A4-205ENST00000570616 RNPC3Q96LT9 517 aaKnown RBP25.74■■□□□ 1.71
SLC12A4-205ENST00000570616 COL1A2P08123 1366 aa25.73■■□□□ 1.71
SLC12A4-205ENST00000570616 MARCH6O60337 910 aa25.73■■□□□ 1.71
SLC12A4-205ENST00000570616 ATP4AP20648 1035 aa25.73■■□□□ 1.71
SLC12A4-205ENST00000570616 THPOP40225 353 aa25.73■■□□□ 1.71
SLC12A4-205ENST00000570616 FXR1P51114 621 aaKnown RBP eCLIP25.73■■□□□ 1.71
SLC12A4-205ENST00000570616 ORC2Q13416 577 aaPredicted RBP25.73■■□□□ 1.71
SLC12A4-205ENST00000570616 ZNF618Q5T7W0 954 aa25.73■■□□□ 1.71
SLC12A4-205ENST00000570616 TRAF7Q6Q0C0 670 aa25.73■■□□□ 1.71
SLC12A4-205ENST00000570616 ZNF365Q70YC5 407 aa25.73■■□□□ 1.71
SLC12A4-205ENST00000570616 RPAINQ86UA6 219 aa25.73■■□□□ 1.71
SLC12A4-205ENST00000570616 CKAP2LQ8IYA6 745 aa25.73■■□□□ 1.71
SLC12A4-205ENST00000570616 BBXQ8WY36 941 aaPredicted RBP25.73■■□□□ 1.71
SLC12A4-205ENST00000570616 FAM167AQ96KS9 214 aa25.73■■□□□ 1.71
SLC12A4-205ENST00000570616 TANC1Q9C0D5 1861 aa25.72■■□□□ 1.71
SLC12A4-205ENST00000570616 K7ELQ4 463 aaPredicted RBP25.72■■□□□ 1.71
SLC12A4-205ENST00000570616 BAG4O95429 457 aaKnown RBP25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms