RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 TNFAIP2Q03169 654 aa17.26■□□□□ 0.35
HERPUD1-219ENST00000570273 DUSP28Q4G0W2 176 aa17.26■□□□□ 0.35
HERPUD1-219ENST00000570273 NAALADL2Q58DX5 795 aa17.26■□□□□ 0.35
HERPUD1-219ENST00000570273 PDXDC2PQ6P474 469 aa17.26■□□□□ 0.35
HERPUD1-219ENST00000570273 LRRC15Q8TF66 581 aa17.26■□□□□ 0.35
HERPUD1-219ENST00000570273 GZF1Q9H116 711 aaPredicted RBP17.26■□□□□ 0.35
HERPUD1-219ENST00000570273 MAGEF1Q9HAY2 307 aa17.26■□□□□ 0.35
HERPUD1-219ENST00000570273 TRIM17Q9Y577 477 aa17.26■□□□□ 0.35
HERPUD1-219ENST00000570273 HTTP42858 3142 aa17.25■□□□□ 0.35
HERPUD1-219ENST00000570273 BACH1O14867 736 aa17.25■□□□□ 0.35
HERPUD1-219ENST00000570273 CTAGE5O15320 804 aa17.25■□□□□ 0.35
HERPUD1-219ENST00000570273 SLITRK3O94933 977 aa17.25■□□□□ 0.35
HERPUD1-219ENST00000570273 MUTP22033 750 aa17.25■□□□□ 0.35
HERPUD1-219ENST00000570273 PTGS1P23219 599 aa17.25■□□□□ 0.35
HERPUD1-219ENST00000570273 ARHGAP1Q07960 439 aa17.25■□□□□ 0.35
HERPUD1-219ENST00000570273 LAMC2Q13753 1193 aa17.25■□□□□ 0.35
HERPUD1-219ENST00000570273 KANK3Q6NY19 840 aa17.25■□□□□ 0.35
HERPUD1-219ENST00000570273 ABHD15Q6UXT9 468 aa17.25■□□□□ 0.35
HERPUD1-219ENST00000570273 KCNK18Q7Z418 384 aa17.25■□□□□ 0.35
HERPUD1-219ENST00000570273 OR6J1Q8NGC5 347 aa17.25■□□□□ 0.35
HERPUD1-219ENST00000570273 RAD54LQ92698 747 aa17.25■□□□□ 0.35
HERPUD1-219ENST00000570273 HOOK1Q9UJC3 728 aaKnown RBP17.25■□□□□ 0.35
HERPUD1-219ENST00000570273 FAM184BQ9ULE4 1060 aa17.25■□□□□ 0.35
HERPUD1-219ENST00000570273 HMGCRP04035 888 aa17.24■□□□□ 0.35
HERPUD1-219ENST00000570273 CYBAP13498 195 aa17.24■□□□□ 0.35
HERPUD1-219ENST00000570273 AFMP43652 599 aa17.24■□□□□ 0.35
HERPUD1-219ENST00000570273 QARSP47897 775 aaKnown RBP17.24■□□□□ 0.35
HERPUD1-219ENST00000570273 PSMC5P62195 406 aa17.24■□□□□ 0.35
HERPUD1-219ENST00000570273 TRIM32Q13049 653 aa17.24■□□□□ 0.35
HERPUD1-219ENST00000570273 UGCGQ16739 394 aa17.24■□□□□ 0.35
HERPUD1-219ENST00000570273 GRAMD1CQ8IYS0 662 aa17.24■□□□□ 0.35
HERPUD1-219ENST00000570273 SEPT1Q8WYJ6 367 aa17.24■□□□□ 0.35
HERPUD1-219ENST00000570273 LARP4BQ92615 738 aaKnown RBP17.24■□□□□ 0.35
HERPUD1-219ENST00000570273 ATP6V0A1Q93050 837 aa17.24■□□□□ 0.35
HERPUD1-219ENST00000570273 GPR20Q99678 358 aa17.24■□□□□ 0.35
HERPUD1-219ENST00000570273 ZSWIM4Q9H7M6 989 aa17.24■□□□□ 0.35
HERPUD1-219ENST00000570273 BLOC1S4Q9NUP1 217 aa17.24■□□□□ 0.35
HERPUD1-219ENST00000570273 GABBR1Q9UBS5 961 aa17.24■□□□□ 0.35
HERPUD1-219ENST00000570273 DNM3Q9UQ16 869 aa17.24■□□□□ 0.35
HERPUD1-219ENST00000570273 DOCK5Q9H7D0 1870 aa17.24■□□□□ 0.35
HERPUD1-219ENST00000570273 GSTTP1A0A1W2PQM5 241 aa17.23■□□□□ 0.35
HERPUD1-219ENST00000570273 E9PMD0 336 aa17.23■□□□□ 0.35
HERPUD1-219ENST00000570273 ADCY6O43306 1168 aa17.23■□□□□ 0.35
HERPUD1-219ENST00000570273 SSBP05455 408 aaKnown RBP eCLIP17.23■□□□□ 0.35
HERPUD1-219ENST00000570273 AKR1A1P14550 325 aa17.23■□□□□ 0.35
HERPUD1-219ENST00000570273 DHX8Q14562 1220 aaKnown RBP17.23■□□□□ 0.35
HERPUD1-219ENST00000570273 MCM6Q14566 821 aa17.23■□□□□ 0.35
HERPUD1-219ENST00000570273 POSTNQ15063 836 aa17.23■□□□□ 0.35
HERPUD1-219ENST00000570273 SWSAP1Q6NVH7 229 aa17.23■□□□□ 0.35
HERPUD1-219ENST00000570273 CCDC60Q8IWA6 550 aaPredicted RBP17.23■□□□□ 0.35
HERPUD1-219ENST00000570273 SLAIN1Q8ND83 568 aa17.23■□□□□ 0.35
HERPUD1-219ENST00000570273 TRPV1Q8NER1 839 aa17.23■□□□□ 0.35
HERPUD1-219ENST00000570273 EMID1Q96A84 441 aaPredicted RBP17.23■□□□□ 0.35
HERPUD1-219ENST00000570273 LENG1Q96BZ8 264 aaPredicted RBP17.23■□□□□ 0.35
HERPUD1-219ENST00000570273 PAGE5Q96GU1 130 aa17.23■□□□□ 0.35
HERPUD1-219ENST00000570273 ZNF302Q9NR11 478 aa17.23■□□□□ 0.35
HERPUD1-219ENST00000570273 WRAP73Q9P2S5 460 aaPredicted RBP17.23■□□□□ 0.35
HERPUD1-219ENST00000570273 IGSF9BQ9UPX0 1349 aa17.23■□□□□ 0.35
HERPUD1-219ENST00000570273 A0A087WWV3 80 aa17.22■□□□□ 0.35
HERPUD1-219ENST00000570273 DKC1O60832 514 aaKnown RBP eCLIP17.22■□□□□ 0.35
HERPUD1-219ENST00000570273 ATG7O95352 703 aa17.22■□□□□ 0.35
HERPUD1-219ENST00000570273 PRR29P0C7W0 189 aa17.22■□□□□ 0.35
HERPUD1-219ENST00000570273 PLA2G4BP0C869 781 aa17.22■□□□□ 0.35
HERPUD1-219ENST00000570273 PRKAR2AP13861 404 aaKnown RBP17.22■□□□□ 0.35
HERPUD1-219ENST00000570273 TCF7P36402 384 aaPredicted RBP17.22■□□□□ 0.35
HERPUD1-219ENST00000570273 CACNB2Q08289 660 aaPredicted RBP17.22■□□□□ 0.35
HERPUD1-219ENST00000570273 PNOCQ13519 176 aa17.22■□□□□ 0.35
HERPUD1-219ENST00000570273 ZSCAN23Q3MJ62 389 aa17.22■□□□□ 0.35
HERPUD1-219ENST00000570273 HSDL1Q3SXM5 330 aa17.22■□□□□ 0.35
HERPUD1-219ENST00000570273 FAM160B1Q5W0V3 765 aa17.22■□□□□ 0.35
HERPUD1-219ENST00000570273 SV2BQ7L1I2 683 aa17.22■□□□□ 0.35
HERPUD1-219ENST00000570273 CKAP2LQ8IYA6 745 aa17.22■□□□□ 0.35
HERPUD1-219ENST00000570273 KCTD17Q8N5Z5 321 aa17.22■□□□□ 0.35
HERPUD1-219ENST00000570273 PPTC7Q8NI37 304 aa17.22■□□□□ 0.35
HERPUD1-219ENST00000570273 PXYLP1Q8TE99 480 aa17.22■□□□□ 0.35
HERPUD1-219ENST00000570273 STAMQ92783 540 aa17.22■□□□□ 0.35
HERPUD1-219ENST00000570273 NACC1Q96RE7 527 aa17.22■□□□□ 0.35
HERPUD1-219ENST00000570273 PTCH2Q9Y6C5 1203 aa17.22■□□□□ 0.35
HERPUD1-219ENST00000570273 LETM1O95202 739 aaPredicted RBP17.21■□□□□ 0.35
HERPUD1-219ENST00000570273 LYPLA2O95372 231 aa17.21■□□□□ 0.35
HERPUD1-219ENST00000570273 EYA4O95677 639 aa17.21■□□□□ 0.35
HERPUD1-219ENST00000570273 CNGA1P29973 690 aa17.21■□□□□ 0.35
HERPUD1-219ENST00000570273 PSMC6P62333 389 aa17.21■□□□□ 0.35
HERPUD1-219ENST00000570273 UTP14CQ5TAP6 766 aaKnown RBP17.21■□□□□ 0.35
HERPUD1-219ENST00000570273 SH3RF1Q7Z6J0 888 aa17.21■□□□□ 0.35
HERPUD1-219ENST00000570273 TLK2Q86UE8 772 aa17.21■□□□□ 0.35
HERPUD1-219ENST00000570273 C4orf19Q8IY42 314 aa17.21■□□□□ 0.35
HERPUD1-219ENST00000570273 ELOA2Q8IYF1 753 aaPredicted RBP17.21■□□□□ 0.35
HERPUD1-219ENST00000570273 PIGOQ8TEQ8 1089 aa17.21■□□□□ 0.35
HERPUD1-219ENST00000570273 AFG1LQ8WV93 481 aa17.21■□□□□ 0.35
HERPUD1-219ENST00000570273 CCDC43Q96MW1 224 aaKnown RBP17.21■□□□□ 0.35
HERPUD1-219ENST00000570273 AZI2Q9H6S1 392 aa17.21■□□□□ 0.35
HERPUD1-219ENST00000570273 GNEQ9Y223 722 aaKnown RBP17.21■□□□□ 0.35
HERPUD1-219ENST00000570273 IGKV6D-21A0A0A0MT36 114 aa17.21■□□□□ 0.34
HERPUD1-219ENST00000570273 SYCE3A1L190 88 aa17.21■□□□□ 0.34
HERPUD1-219ENST00000570273 DYNC1LI2O43237 492 aaPredicted RBP17.21■□□□□ 0.34
HERPUD1-219ENST00000570273 GTPBP6O43824 516 aaPredicted RBP17.21■□□□□ 0.34
HERPUD1-219ENST00000570273 PRKCEQ02156 737 aa17.21■□□□□ 0.34
HERPUD1-219ENST00000570273 COL13A1Q5TAT6 717 aaPredicted RBP17.21■□□□□ 0.34
HERPUD1-219ENST00000570273 ERCC4Q92889 916 aaPredicted RBP17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms