RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 hCG_1984214I3L0E3 225 aa10.56□□□□□ -0.72
CAPN3-219ENST00000569136 ADAMTS4O75173 837 aa10.56□□□□□ -0.72
CAPN3-219ENST00000569136 STAM2O75886 525 aa10.56□□□□□ -0.72
CAPN3-219ENST00000569136 PLEKHA8P1O95397 391 aa10.56□□□□□ -0.72
CAPN3-219ENST00000569136 C6orf222P0C671 652 aaPredicted RBP10.56□□□□□ -0.72
CAPN3-219ENST00000569136 TGFB3P10600 412 aa10.56□□□□□ -0.72
CAPN3-219ENST00000569136 RXRAP19793 462 aa10.56□□□□□ -0.72
CAPN3-219ENST00000569136 METAP2P50579 478 aaKnown RBP eCLIP10.56□□□□□ -0.72
CAPN3-219ENST00000569136 AKAP17AQ02040 695 aaKnown RBP10.56□□□□□ -0.72
CAPN3-219ENST00000569136 COL9A3Q14050 684 aaPredicted RBP10.56□□□□□ -0.72
CAPN3-219ENST00000569136 SLC39A5Q6ZMH5 540 aa10.56□□□□□ -0.72
CAPN3-219ENST00000569136 EEPD1Q7L9B9 569 aa10.56□□□□□ -0.72
CAPN3-219ENST00000569136 ZNF713Q8N859 430 aaPredicted RBP10.56□□□□□ -0.72
CAPN3-219ENST00000569136 PIBF1Q8WXW3 757 aa10.56□□□□□ -0.72
CAPN3-219ENST00000569136 VTI1AQ96AJ9 217 aa10.56□□□□□ -0.72
CAPN3-219ENST00000569136 ZNF274Q96GC6 653 aaPredicted RBP10.56□□□□□ -0.72
CAPN3-219ENST00000569136 PDGFCQ9NRA1 345 aa10.56□□□□□ -0.72
CAPN3-219ENST00000569136 NAP1L2Q9ULW6 460 aaPredicted RBP10.56□□□□□ -0.72
CAPN3-219ENST00000569136 KIAA1024Q9UPX6 916 aa10.56□□□□□ -0.72
CAPN3-219ENST00000569136 ASTN1O14525 1302 aa10.56□□□□□ -0.72
CAPN3-219ENST00000569136 BRCA2P51587 3418 aa10.55□□□□□ -0.72
CAPN3-219ENST00000569136 MGAMO43451 1857 aa10.55□□□□□ -0.72
CAPN3-219ENST00000569136 TTLL8A6PVC2 850 aa10.55□□□□□ -0.72
CAPN3-219ENST00000569136 OPLAHO14841 1288 aa10.55□□□□□ -0.72
CAPN3-219ENST00000569136 MAN1A2O60476 641 aa10.55□□□□□ -0.72
CAPN3-219ENST00000569136 CPT1AP50416 773 aa10.55□□□□□ -0.72
CAPN3-219ENST00000569136 ACLYP53396 1101 aa10.55□□□□□ -0.72
CAPN3-219ENST00000569136 APOBRQ0VD83 1088 aa10.55□□□□□ -0.72
CAPN3-219ENST00000569136 CLN3Q13286 438 aa10.55□□□□□ -0.72
CAPN3-219ENST00000569136 ANKRD1Q15327 319 aa10.55□□□□□ -0.72
CAPN3-219ENST00000569136 FSCN1Q16658 493 aaKnown RBP10.55□□□□□ -0.72
CAPN3-219ENST00000569136 CRTC2Q53ET0 693 aaPredicted RBP10.55□□□□□ -0.72
CAPN3-219ENST00000569136 CCSAPQ6IQ19 270 aaPredicted RBP10.55□□□□□ -0.72
CAPN3-219ENST00000569136 FBXO16Q8IX29 292 aaPredicted RBP10.55□□□□□ -0.72
CAPN3-219ENST00000569136 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.55□□□□□ -0.72
CAPN3-219ENST00000569136 SMARCC2Q8TAQ2 1214 aa10.55□□□□□ -0.72
CAPN3-219ENST00000569136 PBXIP1Q96AQ6 731 aa10.55□□□□□ -0.72
CAPN3-219ENST00000569136 IL17RAQ96F46 866 aa10.55□□□□□ -0.72
CAPN3-219ENST00000569136 GLT1D1Q96MS3 346 aa10.55□□□□□ -0.72
CAPN3-219ENST00000569136 TOX2Q96NM4 488 aa10.55□□□□□ -0.72
CAPN3-219ENST00000569136 PXMP2Q9NR77 195 aa10.55□□□□□ -0.72
CAPN3-219ENST00000569136 PDRG1Q9NUG6 133 aa10.55□□□□□ -0.72
CAPN3-219ENST00000569136 PRKAG2Q9UGJ0 569 aa10.55□□□□□ -0.72
CAPN3-219ENST00000569136 SYNRGQ9UMZ2 1314 aa10.55□□□□□ -0.72
CAPN3-219ENST00000569136 ZSWIM8A7E2V4 1837 aa10.54□□□□□ -0.72
CAPN3-219ENST00000569136 PRPF3O43395 683 aaKnown RBP10.54□□□□□ -0.72
CAPN3-219ENST00000569136 FOSP01100 380 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-219ENST00000569136 IL2RAP01589 272 aa10.54□□□□□ -0.72
CAPN3-219ENST00000569136 ASGR1P07306 291 aa10.54□□□□□ -0.72
CAPN3-219ENST00000569136 TXNP10599 105 aaKnown RBP10.54□□□□□ -0.72
CAPN3-219ENST00000569136 CPA1P15085 419 aa10.54□□□□□ -0.72
CAPN3-219ENST00000569136 PDIA3P30101 505 aaKnown RBP10.54□□□□□ -0.72
CAPN3-219ENST00000569136 CCND2P30279 289 aa10.54□□□□□ -0.72
CAPN3-219ENST00000569136 HOXA13P31271 388 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-219ENST00000569136 SNX17Q15036 470 aa10.54□□□□□ -0.72
CAPN3-219ENST00000569136 LRRC26Q2I0M4 334 aa10.54□□□□□ -0.72
CAPN3-219ENST00000569136 MCTP2Q6DN12 878 aa10.54□□□□□ -0.72
CAPN3-219ENST00000569136 CCDC62Q6P9F0 684 aa10.54□□□□□ -0.72
CAPN3-219ENST00000569136 CPLX2Q6PUV4 134 aaKnown RBP10.54□□□□□ -0.72
CAPN3-219ENST00000569136 SEPT14Q6ZU15 432 aa10.54□□□□□ -0.72
CAPN3-219ENST00000569136 TLK2Q86UE8 772 aa10.54□□□□□ -0.72
CAPN3-219ENST00000569136 FCHSD1Q86WN1 690 aa10.54□□□□□ -0.72
CAPN3-219ENST00000569136 CMTR1Q8N1G2 835 aaKnown RBP10.54□□□□□ -0.72
CAPN3-219ENST00000569136 CCDC12Q8WUD4 166 aaPredicted RBP10.54□□□□□ -0.72
CAPN3-219ENST00000569136 FERMT2Q96AC1 680 aa10.54□□□□□ -0.72
CAPN3-219ENST00000569136 PDCD2LQ9BRP1 358 aa10.54□□□□□ -0.72
CAPN3-219ENST00000569136 EHMT1Q9H9B1 1298 aa10.54□□□□□ -0.72
CAPN3-219ENST00000569136 STARD7Q9NQZ5 370 aa10.54□□□□□ -0.72
CAPN3-219ENST00000569136 COL20A1Q9P218 1284 aa10.54□□□□□ -0.72
CAPN3-219ENST00000569136 MYH4Q9Y623 1939 aa10.54□□□□□ -0.72
CAPN3-219ENST00000569136 A0A0G2JMZ2 1700 aa10.53□□□□□ -0.72
CAPN3-219ENST00000569136 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.53□□□□□ -0.72
CAPN3-219ENST00000569136 A0A1W2PQ45 241 aaPredicted RBP10.53□□□□□ -0.72
CAPN3-219ENST00000569136 A0A1W2PQY0 241 aa10.53□□□□□ -0.72
CAPN3-219ENST00000569136 SOBPA7XYQ1 873 aa10.53□□□□□ -0.72
CAPN3-219ENST00000569136 DCDC2CA8MYV0 355 aa10.53□□□□□ -0.72
CAPN3-219ENST00000569136 MEIS2O14770 477 aa10.53□□□□□ -0.72
CAPN3-219ENST00000569136 MAFGO15525 162 aa10.53□□□□□ -0.72
CAPN3-219ENST00000569136 MYCLP12524 364 aaPredicted RBP10.53□□□□□ -0.72
CAPN3-219ENST00000569136 IFNAR1P17181 557 aa10.53□□□□□ -0.72
CAPN3-219ENST00000569136 EIF2AK2P19525 551 aaKnown RBP10.53□□□□□ -0.72
CAPN3-219ENST00000569136 RTP1P59025 263 aa10.53□□□□□ -0.72
CAPN3-219ENST00000569136 LAMC2Q13753 1193 aa10.53□□□□□ -0.72
CAPN3-219ENST00000569136 PGM5Q15124 567 aa10.53□□□□□ -0.72
CAPN3-219ENST00000569136 TLR1Q15399 786 aa10.53□□□□□ -0.72
CAPN3-219ENST00000569136 GNPTABQ3T906 1256 aa10.53□□□□□ -0.72
CAPN3-219ENST00000569136 ANKRD33Q7Z3H0 272 aa10.53□□□□□ -0.72
CAPN3-219ENST00000569136 HEATR3Q7Z4Q2 680 aa10.53□□□□□ -0.72
CAPN3-219ENST00000569136 RAB11FIP4Q86YS3 637 aa10.53□□□□□ -0.72
CAPN3-219ENST00000569136 FAM177A1Q8N128 213 aaPredicted RBP10.53□□□□□ -0.72
CAPN3-219ENST00000569136 RIC8AQ9NPQ8 531 aa10.53□□□□□ -0.72
CAPN3-219ENST00000569136 BARHL2Q9NY43 387 aa10.53□□□□□ -0.72
CAPN3-219ENST00000569136 ZNF236Q9UL36 1845 aa10.53□□□□□ -0.72
CAPN3-219ENST00000569136 PLXNB2O15031 1838 aa10.52□□□□□ -0.73
CAPN3-219ENST00000569136 A0A0U1RQG5 324 aaPredicted RBP10.52□□□□□ -0.73
CAPN3-219ENST00000569136 SMCO2A6NFE2 343 aa10.52□□□□□ -0.73
CAPN3-219ENST00000569136 SPDYE3A6NKU9 549 aa10.52□□□□□ -0.73
CAPN3-219ENST00000569136 SFI1A8K8P3 1242 aa10.52□□□□□ -0.73
CAPN3-219ENST00000569136 ARVCFO00192 962 aa10.52□□□□□ -0.73
CAPN3-219ENST00000569136 CPLX1O14810 134 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms