RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 ERCC4Q92889 916 aaPredicted RBP7.62□□□□□ -1.19
UBR1-208ENST00000569066 SHISA4Q96DD7 197 aa7.62□□□□□ -1.19
UBR1-208ENST00000569066 BCAS3Q9H6U6 928 aa7.62□□□□□ -1.19
UBR1-208ENST00000569066 KCNH7Q9NS40 1196 aa7.62□□□□□ -1.19
UBR1-208ENST00000569066 ZBTB21Q9ULJ3 1066 aa7.62□□□□□ -1.19
UBR1-208ENST00000569066 ACOT7O00154 380 aa7.61□□□□□ -1.19
UBR1-208ENST00000569066 TADA3O75528 432 aa7.61□□□□□ -1.19
UBR1-208ENST00000569066 MMEP08473 750 aa7.61□□□□□ -1.19
UBR1-208ENST00000569066 THBS2P35442 1172 aa7.61□□□□□ -1.19
UBR1-208ENST00000569066 POFUT1Q9H488 388 aa7.61□□□□□ -1.19
UBR1-208ENST00000569066 EDARQ9UNE0 448 aa7.61□□□□□ -1.19
UBR1-208ENST00000569066 PLA2G2DQ9UNK4 145 aa7.61□□□□□ -1.19
UBR1-208ENST00000569066 SNUPNO95149 360 aaKnown RBP7.61□□□□□ -1.19
UBR1-208ENST00000569066 C4BPAP04003 597 aaKnown RBP7.61□□□□□ -1.19
UBR1-208ENST00000569066 PRNPP04156 253 aa7.61□□□□□ -1.19
UBR1-208ENST00000569066 CT47B1P0C2W7 299 aaPredicted RBP7.61□□□□□ -1.19
UBR1-208ENST00000569066 LSP1P33241 339 aa7.61□□□□□ -1.19
UBR1-208ENST00000569066 CD97P48960 835 aa7.61□□□□□ -1.19
UBR1-208ENST00000569066 SLC51AQ86UW1 340 aa7.61□□□□□ -1.19
UBR1-208ENST00000569066 TCEAL8Q8IYN2 117 aa7.61□□□□□ -1.19
UBR1-208ENST00000569066 CPA6Q8N4T0 437 aa7.61□□□□□ -1.19
UBR1-208ENST00000569066 MAGEB6Q8N7X4 407 aa7.61□□□□□ -1.19
UBR1-208ENST00000569066 SLC2A13Q96QE2 648 aa7.61□□□□□ -1.19
UBR1-208ENST00000569066 SLC13A1Q9BZW2 595 aa7.61□□□□□ -1.19
UBR1-208ENST00000569066 ASH2LQ9UBL3 628 aa7.61□□□□□ -1.19
UBR1-208ENST00000569066 TCRBV5S2A0A599 114 aa7.6□□□□□ -1.19
UBR1-208ENST00000569066 ZC3H12DA2A288 527 aaKnown RBP7.6□□□□□ -1.19
UBR1-208ENST00000569066 OSMP13725 252 aa7.6□□□□□ -1.19
UBR1-208ENST00000569066 EPHA5P54756 1037 aa7.6□□□□□ -1.19
UBR1-208ENST00000569066 CHRNEQ04844 493 aa7.6□□□□□ -1.19
UBR1-208ENST00000569066 BTBD8Q5XKL5 378 aa7.6□□□□□ -1.19
UBR1-208ENST00000569066 NLRX1Q86UT6 975 aa7.6□□□□□ -1.19
UBR1-208ENST00000569066 C16orf92Q96LL3 132 aa7.6□□□□□ -1.19
UBR1-208ENST00000569066 LRGUKQ96M69 825 aa7.6□□□□□ -1.19
UBR1-208ENST00000569066 ANO3Q9BYT9 981 aa7.6□□□□□ -1.19
UBR1-208ENST00000569066 SMOC1Q9H4F8 434 aa7.6□□□□□ -1.19
UBR1-208ENST00000569066 PCDHB4Q9Y5E5 795 aa7.6□□□□□ -1.19
UBR1-208ENST00000569066 ZRANB2O95218 330 aaKnown RBP eCLIP7.59□□□□□ -1.19
UBR1-208ENST00000569066 DBHP09172 617 aa7.59□□□□□ -1.19
UBR1-208ENST00000569066 RBP3P10745 1247 aa7.59□□□□□ -1.19
UBR1-208ENST00000569066 FUT4P22083 530 aa7.59□□□□□ -1.19
UBR1-208ENST00000569066 NLGN4XQ8N0W4 816 aa7.59□□□□□ -1.19
UBR1-208ENST00000569066 POLR3GLQ9BT43 218 aa7.59□□□□□ -1.19
UBR1-208ENST00000569066 ANLNQ9NQW6 1124 aa7.59□□□□□ -1.19
UBR1-208ENST00000569066 SPEF1Q9Y4P9 236 aa7.59□□□□□ -1.19
UBR1-208ENST00000569066 E2F8A0AVK6 867 aa7.59□□□□□ -1.19
UBR1-208ENST00000569066 FITM1A5D6W6 292 aa7.59□□□□□ -1.19
UBR1-208ENST00000569066 VSTM5A8MXK1 200 aa7.59□□□□□ -1.19
UBR1-208ENST00000569066 COBLO75128 1261 aa7.59□□□□□ -1.19
UBR1-208ENST00000569066 SLC6A11P48066 632 aa7.59□□□□□ -1.19
UBR1-208ENST00000569066 CABP7Q86V35 215 aa7.59□□□□□ -1.19
UBR1-208ENST00000569066 VSIG10LQ86VR7 867 aa7.59□□□□□ -1.19
UBR1-208ENST00000569066 DTX1Q86Y01 620 aa7.59□□□□□ -1.19
UBR1-208ENST00000569066 OXR1Q8N573 874 aa7.59□□□□□ -1.19
UBR1-208ENST00000569066 CCDC136Q96JN2 1154 aa7.59□□□□□ -1.19
UBR1-208ENST00000569066 PRDM12Q9H4Q4 367 aa7.59□□□□□ -1.19
UBR1-208ENST00000569066 RBPJLQ9UBG7 517 aa7.59□□□□□ -1.19
UBR1-208ENST00000569066 SPINK2P20155 84 aa7.58□□□□□ -1.2
UBR1-208ENST00000569066 SRSF2Q01130 221 aaKnown RBP7.58□□□□□ -1.2
UBR1-208ENST00000569066 NXNQ6DKJ4 435 aa7.58□□□□□ -1.2
UBR1-208ENST00000569066 CC2D1AQ6P1N0 951 aaPredicted RBP7.58□□□□□ -1.2
UBR1-208ENST00000569066 SLC23A3Q6PIS1 610 aa7.58□□□□□ -1.2
UBR1-208ENST00000569066 TNFRSF12AQ9NP84 129 aa7.58□□□□□ -1.2
UBR1-208ENST00000569066 ACSS2Q9NR19 701 aa7.58□□□□□ -1.2
UBR1-208ENST00000569066 MBNL3Q9NUK0 354 aaKnown RBP7.58□□□□□ -1.2
UBR1-208ENST00000569066 HPXP02790 462 aa7.58□□□□□ -1.2
UBR1-208ENST00000569066 RECQLP46063 649 aaPredicted RBP7.58□□□□□ -1.2
UBR1-208ENST00000569066 ACAP2Q15057 778 aa7.58□□□□□ -1.2
UBR1-208ENST00000569066 PLCL1Q15111 1095 aa7.58□□□□□ -1.2
UBR1-208ENST00000569066 CT83Q5H943 113 aa7.58□□□□□ -1.2
UBR1-208ENST00000569066 ZBTB41Q5SVQ8 909 aa7.58□□□□□ -1.2
UBR1-208ENST00000569066 DCP2Q8IU60 420 aaKnown RBP7.58□□□□□ -1.2
UBR1-208ENST00000569066 ASB15Q8WXK1 588 aa7.58□□□□□ -1.2
UBR1-208ENST00000569066 TIFAQ96CG3 184 aa7.58□□□□□ -1.2
UBR1-208ENST00000569066 ZNF652Q9Y2D9 606 aa7.58□□□□□ -1.2
UBR1-208ENST00000569066 PPP2R3BQ9Y5P8 575 aa7.58□□□□□ -1.2
UBR1-208ENST00000569066 NUDT19A8MXV4 375 aa7.57□□□□□ -1.2
UBR1-208ENST00000569066 RFPL1O75677 317 aa7.57□□□□□ -1.2
UBR1-208ENST00000569066 RNASE1P07998 156 aaKnown RBP7.57□□□□□ -1.2
UBR1-208ENST00000569066 MC4RP32245 332 aa7.57□□□□□ -1.2
UBR1-208ENST00000569066 FAPQ12884 760 aa7.57□□□□□ -1.2
UBR1-208ENST00000569066 GPR158Q5T848 1215 aa7.57□□□□□ -1.2
UBR1-208ENST00000569066 UNQ6494/PRO21346Q6UXR6 183 aa7.57□□□□□ -1.2
UBR1-208ENST00000569066 EPM2AIP1Q7L775 607 aaPredicted RBP7.57□□□□□ -1.2
UBR1-208ENST00000569066 SPPL2CQ8IUH8 684 aa7.57□□□□□ -1.2
UBR1-208ENST00000569066 CMTR2Q8IYT2 770 aaKnown RBP7.57□□□□□ -1.2
UBR1-208ENST00000569066 JADE3Q92613 823 aa7.57□□□□□ -1.2
UBR1-208ENST00000569066 SCYL1Q96KG9 808 aa7.57□□□□□ -1.2
UBR1-208ENST00000569066 TEKT5Q96M29 485 aa7.57□□□□□ -1.2
UBR1-208ENST00000569066 QRSL1Q9H0R6 528 aaKnown RBP7.57□□□□□ -1.2
UBR1-208ENST00000569066 CHST12Q9NRB3 414 aa7.57□□□□□ -1.2
UBR1-208ENST00000569066 ANGEL1Q9UNK9 670 aaKnown RBP7.57□□□□□ -1.2
UBR1-208ENST00000569066 ARID4BQ4LE39 1312 aaPredicted RBP7.57□□□□□ -1.2
UBR1-208ENST00000569066 TRIM75PA6NK02 468 aa7.57□□□□□ -1.2
UBR1-208ENST00000569066 ELL2O00472 640 aaPredicted RBP7.57□□□□□ -1.2
UBR1-208ENST00000569066 CYP17A1P05093 508 aa7.57□□□□□ -1.2
UBR1-208ENST00000569066 CD40P25942 277 aa7.57□□□□□ -1.2
UBR1-208ENST00000569066 NR0B2Q15466 257 aa7.57□□□□□ -1.2
UBR1-208ENST00000569066 INTS5Q6P9B9 1019 aaKnown RBP7.57□□□□□ -1.2
UBR1-208ENST00000569066 SLC4A10Q6U841 1118 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms