RNA–Protein interactions for RNA: ENST00000568291.2

SF3B3-211, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,067 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-211ENST00000568291 ZNF713Q8N859 430 aaPredicted RBP10.83□□□□□ -0.68
SF3B3-211ENST00000568291 CAGE1Q8TC20 777 aa10.83□□□□□ -0.68
SF3B3-211ENST00000568291 OXER1Q8TDS5 423 aa10.83□□□□□ -0.68
SF3B3-211ENST00000568291 RNPEPQ9H4A4 650 aa10.83□□□□□ -0.68
SF3B3-211ENST00000568291 TUT1Q9H6E5 874 aaKnown RBP10.83□□□□□ -0.68
SF3B3-211ENST00000568291 EHMT1Q9H9B1 1298 aa10.83□□□□□ -0.68
SF3B3-211ENST00000568291 AGO4Q9HCK5 861 aaKnown RBP10.83□□□□□ -0.68
SF3B3-211ENST00000568291 GTF2IRD1Q9UHL9 959 aa10.83□□□□□ -0.68
SF3B3-211ENST00000568291 NLRC5Q86WI3 1866 aa10.83□□□□□ -0.68
SF3B3-211ENST00000568291 ESYT2A0FGR8 921 aa10.82□□□□□ -0.68
SF3B3-211ENST00000568291 MEIS1O00470 390 aa10.82□□□□□ -0.68
SF3B3-211ENST00000568291 DEXIO95424 95 aa10.82□□□□□ -0.68
SF3B3-211ENST00000568291 CCNE2O96020 404 aa10.82□□□□□ -0.68
SF3B3-211ENST00000568291 SMIM10L2AP0DMW4 78 aa10.82□□□□□ -0.68
SF3B3-211ENST00000568291 SMIM10L2BP0DMW5 78 aa10.82□□□□□ -0.68
SF3B3-211ENST00000568291 HOXD8P13378 290 aaPredicted RBP10.82□□□□□ -0.68
SF3B3-211ENST00000568291 TFF2Q03403 129 aa10.82□□□□□ -0.68
SF3B3-211ENST00000568291 TAP1Q03518 808 aa10.82□□□□□ -0.68
SF3B3-211ENST00000568291 AP3B2Q13367 1082 aa10.82□□□□□ -0.68
SF3B3-211ENST00000568291 NPY5RQ15761 445 aa10.82□□□□□ -0.68
SF3B3-211ENST00000568291 PRR16Q569H4 304 aa10.82□□□□□ -0.68
SF3B3-211ENST00000568291 KRT40Q6A162 431 aa10.82□□□□□ -0.68
SF3B3-211ENST00000568291 PHOSPHO2Q8TCD6 241 aa10.82□□□□□ -0.68
SF3B3-211ENST00000568291 AFAP1L1Q8TED9 768 aa10.82□□□□□ -0.68
SF3B3-211ENST00000568291 CRYGNQ8WXF5 182 aa10.82□□□□□ -0.68
SF3B3-211ENST00000568291 ARNTL2Q8WYA1 636 aa10.82□□□□□ -0.68
SF3B3-211ENST00000568291 NECAB3Q96P71 396 aaPredicted RBP10.82□□□□□ -0.68
SF3B3-211ENST00000568291 PCYT2Q99447 389 aa10.82□□□□□ -0.68
SF3B3-211ENST00000568291 SENP7Q9BQF6 1050 aa10.82□□□□□ -0.68
SF3B3-211ENST00000568291 C22orf23Q9BZE7 217 aa10.82□□□□□ -0.68
SF3B3-211ENST00000568291 OSBPL7Q9BZF2 842 aa10.82□□□□□ -0.68
SF3B3-211ENST00000568291 ORC3Q9UBD5 711 aaPredicted RBP10.82□□□□□ -0.68
SF3B3-211ENST00000568291 MTCH2Q9Y6C9 303 aa10.82□□□□□ -0.68
SF3B3-211ENST00000568291 TRANK1O15050 2925 aa10.82□□□□□ -0.68
SF3B3-211ENST00000568291 IGLV3-22A0A075B6J6 115 aa10.81□□□□□ -0.68
SF3B3-211ENST00000568291 FAM205CA6NFA0 338 aa10.81□□□□□ -0.68
SF3B3-211ENST00000568291 KIF28PB7ZC32 967 aa10.81□□□□□ -0.68
SF3B3-211ENST00000568291 TREHO43280 583 aa10.81□□□□□ -0.68
SF3B3-211ENST00000568291 TLL1O43897 1013 aa10.81□□□□□ -0.68
SF3B3-211ENST00000568291 SELPP16109 830 aa10.81□□□□□ -0.68
SF3B3-211ENST00000568291 GNA11P29992 359 aa10.81□□□□□ -0.68
SF3B3-211ENST00000568291 KCNQ1P51787 676 aa10.81□□□□□ -0.68
SF3B3-211ENST00000568291 ACTR2P61160 394 aa10.81□□□□□ -0.68
SF3B3-211ENST00000568291 WDR5P61964 334 aaKnown RBP10.81□□□□□ -0.68
SF3B3-211ENST00000568291 IGBP1P78318 339 aa10.81□□□□□ -0.68
SF3B3-211ENST00000568291 GPNMBQ14956 572 aa10.81□□□□□ -0.68
SF3B3-211ENST00000568291 AAK1Q2M2I8 961 aa10.81□□□□□ -0.68
SF3B3-211ENST00000568291 TCTN1Q2MV58 587 aa10.81□□□□□ -0.68
SF3B3-211ENST00000568291 CPLX2Q6PUV4 134 aaKnown RBP10.81□□□□□ -0.68
SF3B3-211ENST00000568291 LRRC8DQ7L1W4 858 aa10.81□□□□□ -0.68
SF3B3-211ENST00000568291 SPRED2Q7Z698 418 aa10.81□□□□□ -0.68
SF3B3-211ENST00000568291 SESTD1Q86VW0 696 aa10.81□□□□□ -0.68
SF3B3-211ENST00000568291 BLIDQ8IZY5 108 aa10.81□□□□□ -0.68
SF3B3-211ENST00000568291 SPDYE1Q8NFV5 336 aaPredicted RBP10.81□□□□□ -0.68
SF3B3-211ENST00000568291 TBCKQ8TEA7 893 aa10.81□□□□□ -0.68
SF3B3-211ENST00000568291 CCDC12Q8WUD4 166 aaPredicted RBP10.81□□□□□ -0.68
SF3B3-211ENST00000568291 SEPT1Q8WYJ6 367 aa10.81□□□□□ -0.68
SF3B3-211ENST00000568291 GLG1Q92896 1179 aa10.81□□□□□ -0.68
SF3B3-211ENST00000568291 ATP6V0A1Q93050 837 aa10.81□□□□□ -0.68
SF3B3-211ENST00000568291 IL17RAQ96F46 866 aa10.81□□□□□ -0.68
SF3B3-211ENST00000568291 JPH1Q9HDC5 661 aaPredicted RBP10.81□□□□□ -0.68
SF3B3-211ENST00000568291 SLC9A2Q9UBY0 812 aa10.81□□□□□ -0.68
SF3B3-211ENST00000568291 PCDHA4Q9UN74 947 aa10.81□□□□□ -0.68
SF3B3-211ENST00000568291 KAT6AQ92794 2004 aa10.8□□□□□ -0.68
SF3B3-211ENST00000568291 MUC3AQ02505 3323 aa10.8□□□□□ -0.68
SF3B3-211ENST00000568291 C17orf102A2RUQ5 167 aa10.8□□□□□ -0.68
SF3B3-211ENST00000568291 DHX15O43143 795 aaKnown RBP10.8□□□□□ -0.68
SF3B3-211ENST00000568291 TDP2O95551 362 aa10.8□□□□□ -0.68
SF3B3-211ENST00000568291 CYP3A4P08684 503 aa10.8□□□□□ -0.68
SF3B3-211ENST00000568291 CTSHP09668 335 aa10.8□□□□□ -0.68
SF3B3-211ENST00000568291 POU3F3P20264 500 aaPredicted RBP10.8□□□□□ -0.68
SF3B3-211ENST00000568291 THPOP40225 353 aa10.8□□□□□ -0.68
SF3B3-211ENST00000568291 DEFB103AP81534 67 aa10.8□□□□□ -0.68
SF3B3-211ENST00000568291 GUCY1B3Q02153 619 aa10.8□□□□□ -0.68
SF3B3-211ENST00000568291 RBL2Q08999 1139 aa10.8□□□□□ -0.68
SF3B3-211ENST00000568291 ANKRD1Q15327 319 aa10.8□□□□□ -0.68
SF3B3-211ENST00000568291 INF2Q27J81 1249 aa10.8□□□□□ -0.68
SF3B3-211ENST00000568291 EARS2Q5JPH6 523 aaKnown RBP10.8□□□□□ -0.68
SF3B3-211ENST00000568291 ZNF618Q5T7W0 954 aa10.8□□□□□ -0.68
SF3B3-211ENST00000568291 CNKSR3Q6P9H4 555 aa10.8□□□□□ -0.68
SF3B3-211ENST00000568291 RUFY4Q6ZNE9 571 aa10.8□□□□□ -0.68
SF3B3-211ENST00000568291 TMCO2Q7Z6W1 182 aaPredicted RBP10.8□□□□□ -0.68
SF3B3-211ENST00000568291 CCDC83Q8IWF9 413 aa10.8□□□□□ -0.68
SF3B3-211ENST00000568291 NSUN7Q8NE18 718 aaKnown RBP10.8□□□□□ -0.68
SF3B3-211ENST00000568291 CCDC148Q8NFR7 591 aa10.8□□□□□ -0.68
SF3B3-211ENST00000568291 GDPD5Q8WTR4 605 aa10.8□□□□□ -0.68
SF3B3-211ENST00000568291 TRAPPC12Q8WVT3 735 aa10.8□□□□□ -0.68
SF3B3-211ENST00000568291 GTF3C6Q969F1 213 aa10.8□□□□□ -0.68
SF3B3-211ENST00000568291 CDHR1Q96JP9 859 aa10.8□□□□□ -0.68
SF3B3-211ENST00000568291 SDF4Q9BRK5 362 aa10.8□□□□□ -0.68
SF3B3-211ENST00000568291 ZNF577Q9BSK1 485 aa10.8□□□□□ -0.68
SF3B3-211ENST00000568291 KATNAL1Q9BW62 490 aa10.8□□□□□ -0.68
SF3B3-211ENST00000568291 GLT8D2Q9H1C3 349 aa10.8□□□□□ -0.68
SF3B3-211ENST00000568291 SH3GLB2Q9NR46 395 aa10.8□□□□□ -0.68
SF3B3-211ENST00000568291 RAPGEFL1Q9UHV5 662 aa10.8□□□□□ -0.68
SF3B3-211ENST00000568291 GTF3C3Q9Y5Q9 886 aa10.8□□□□□ -0.68
SF3B3-211ENST00000568291 ATG2AQ2TAZ0 1938 aa10.8□□□□□ -0.68
SF3B3-211ENST00000568291 REV3LO60673 3130 aa10.79□□□□□ -0.68
SF3B3-211ENST00000568291 RALGAPA2Q2PPJ7 1873 aa10.79□□□□□ -0.68
SF3B3-211ENST00000568291 LCHNA4D1U4 455 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms