RNA–Protein interactions for RNA: ENST00000568238.1

TSC2-220, Transcript of TSC complex subunit 2, humanhuman

TSL 3

Gene TSC2, Length 422 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-220ENST00000568238 KCNH7Q9NS40 1196 aa14.69□□□□□ -0.06
TSC2-220ENST00000568238 SLC9A2Q9UBY0 812 aa14.69□□□□□ -0.06
TSC2-220ENST00000568238 TPCN1Q9ULQ1 816 aa14.69□□□□□ -0.06
TSC2-220ENST00000568238 NFASCO94856 1347 aa14.68□□□□□ -0.06
TSC2-220ENST00000568238 NLRC5Q86WI3 1866 aa14.68□□□□□ -0.06
TSC2-220ENST00000568238 RBAK-RBAKDNI3L0D1 243 aa14.68□□□□□ -0.06
TSC2-220ENST00000568238 AMHP03971 560 aa14.68□□□□□ -0.06
TSC2-220ENST00000568238 CLK2P49760 499 aaKnown RBP14.68□□□□□ -0.06
TSC2-220ENST00000568238 EVCP57679 992 aa14.68□□□□□ -0.06
TSC2-220ENST00000568238 MKRN4PQ13434 485 aaPredicted RBP14.68□□□□□ -0.06
TSC2-220ENST00000568238 GRIK4Q16099 956 aa14.68□□□□□ -0.06
TSC2-220ENST00000568238 TJAP1Q5JTD0 557 aa14.68□□□□□ -0.06
TSC2-220ENST00000568238 FAM117BQ6P1L5 589 aa14.68□□□□□ -0.06
TSC2-220ENST00000568238 TAF2Q6P1X5 1199 aa14.68□□□□□ -0.06
TSC2-220ENST00000568238 CYP2W1Q8TAV3 490 aa14.68□□□□□ -0.06
TSC2-220ENST00000568238 CCDC12Q8WUD4 166 aaPredicted RBP14.68□□□□□ -0.06
TSC2-220ENST00000568238 SYMPKQ92797 1274 aaKnown RBP14.68□□□□□ -0.06
TSC2-220ENST00000568238 RAD9AQ99638 391 aa14.68□□□□□ -0.06
TSC2-220ENST00000568238 NCOA5Q9HCD5 579 aaKnown RBP14.68□□□□□ -0.06
TSC2-220ENST00000568238 TMEM260Q9NX78 707 aa14.68□□□□□ -0.06
TSC2-220ENST00000568238 TUBE1Q9UJT0 475 aa14.68□□□□□ -0.06
TSC2-220ENST00000568238 LOXHD1Q8IVV2 1947 aa14.68□□□□□ -0.06
TSC2-220ENST00000568238 MYH9P35579 1960 aaKnown RBP14.67□□□□□ -0.06
TSC2-220ENST00000568238 ESYT2A0FGR8 921 aa14.67□□□□□ -0.06
TSC2-220ENST00000568238 RFXAPO00287 272 aa14.67□□□□□ -0.06
TSC2-220ENST00000568238 ZNF76P36508 570 aa14.67□□□□□ -0.06
TSC2-220ENST00000568238 CCT2P78371 535 aaKnown RBP14.67□□□□□ -0.06
TSC2-220ENST00000568238 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.67□□□□□ -0.06
TSC2-220ENST00000568238 RUFY4Q6ZNE9 571 aa14.67□□□□□ -0.06
TSC2-220ENST00000568238 SPRED2Q7Z698 418 aa14.67□□□□□ -0.06
TSC2-220ENST00000568238 MYOCDQ8IZQ8 938 aa14.67□□□□□ -0.06
TSC2-220ENST00000568238 ATXN2LQ8WWM7 1075 aaKnown RBP14.67□□□□□ -0.06
TSC2-220ENST00000568238 ZNF274Q96GC6 653 aaPredicted RBP14.67□□□□□ -0.06
TSC2-220ENST00000568238 TSPYL2Q9H2G4 693 aaPredicted RBP14.67□□□□□ -0.06
TSC2-220ENST00000568238 AZI2Q9H6S1 392 aa14.67□□□□□ -0.06
TSC2-220ENST00000568238 AGO4Q9HCK5 861 aaKnown RBP14.67□□□□□ -0.06
TSC2-220ENST00000568238 MTCH2Q9Y6C9 303 aa14.67□□□□□ -0.06
TSC2-220ENST00000568238 COL4A6Q14031 1691 aa14.67□□□□□ -0.06
TSC2-220ENST00000568238 RALGAPA2Q2PPJ7 1873 aa14.66□□□□□ -0.06
TSC2-220ENST00000568238 MBLAC1A4D2B0 266 aaPredicted RBP14.66□□□□□ -0.06
TSC2-220ENST00000568238 MEIS1O00470 390 aa14.66□□□□□ -0.06
TSC2-220ENST00000568238 ST18O60284 1047 aa14.66□□□□□ -0.06
TSC2-220ENST00000568238 LARGE1O95461 756 aa14.66□□□□□ -0.06
TSC2-220ENST00000568238 ARP10275 920 aa14.66□□□□□ -0.06
TSC2-220ENST00000568238 POU3F3P20264 500 aaPredicted RBP14.66□□□□□ -0.06
TSC2-220ENST00000568238 ACTR2P61160 394 aa14.66□□□□□ -0.06
TSC2-220ENST00000568238 AKAP17AQ02040 695 aaKnown RBP14.66□□□□□ -0.06
TSC2-220ENST00000568238 ITGB3BPQ13352 177 aaPredicted RBP14.66□□□□□ -0.06
TSC2-220ENST00000568238 FAM26DQ5JW98 314 aa14.66□□□□□ -0.06
TSC2-220ENST00000568238 JAKMIP3Q5VZ66 844 aa14.66□□□□□ -0.06
TSC2-220ENST00000568238 NIPA1Q7RTP0 329 aa14.66□□□□□ -0.06
TSC2-220ENST00000568238 RPAINQ86UA6 219 aa14.66□□□□□ -0.06
TSC2-220ENST00000568238 RSPH3Q86UC2 560 aa14.66□□□□□ -0.06
TSC2-220ENST00000568238 REXO1Q8N1G1 1221 aaKnown RBP14.66□□□□□ -0.06
TSC2-220ENST00000568238 APBB2Q92870 758 aa14.66□□□□□ -0.06
TSC2-220ENST00000568238 PHKBQ93100 1093 aa14.66□□□□□ -0.06
TSC2-220ENST00000568238 IFIH1Q9BYX4 1025 aaKnown RBP14.66□□□□□ -0.06
TSC2-220ENST00000568238 ZMYND12Q9H0C1 365 aa14.66□□□□□ -0.06
TSC2-220ENST00000568238 BRWD1Q9NSI6 2320 aa14.66□□□□□ -0.06
TSC2-220ENST00000568238 WDR81Q562E7 1941 aa14.66□□□□□ -0.06
TSC2-220ENST00000568238 LINC01553A4QN01 128 aa14.65□□□□□ -0.06
TSC2-220ENST00000568238 PRPF3O43395 683 aaKnown RBP14.65□□□□□ -0.06
TSC2-220ENST00000568238 PPFIA3O75145 1194 aa14.65□□□□□ -0.06
TSC2-220ENST00000568238 RPLP2P05387 115 aaKnown RBP14.65□□□□□ -0.06
TSC2-220ENST00000568238 IGBP1P78318 339 aa14.65□□□□□ -0.06
TSC2-220ENST00000568238 GRB10Q13322 594 aa14.65□□□□□ -0.06
TSC2-220ENST00000568238 SKIV2LQ15477 1246 aaKnown RBP14.65□□□□□ -0.06
TSC2-220ENST00000568238 MCTP2Q6DN12 878 aa14.65□□□□□ -0.06
TSC2-220ENST00000568238 NECAB1Q8N987 351 aa14.65□□□□□ -0.06
TSC2-220ENST00000568238 GDPD5Q8WTR4 605 aa14.65□□□□□ -0.06
TSC2-220ENST00000568238 TNPO1Q92973 898 aaKnown RBP14.65□□□□□ -0.06
TSC2-220ENST00000568238 TGS1Q96RS0 853 aaKnown RBP14.65□□□□□ -0.06
TSC2-220ENST00000568238 PCYT2Q99447 389 aa14.65□□□□□ -0.06
TSC2-220ENST00000568238 OSBPL7Q9BZF2 842 aa14.65□□□□□ -0.06
TSC2-220ENST00000568238 SLKQ9H2G2 1235 aaPredicted RBP14.65□□□□□ -0.06
TSC2-220ENST00000568238 C6orf50Q9HD87 102 aa14.65□□□□□ -0.06
TSC2-220ENST00000568238 MTUS1Q9ULD2 1270 aa14.65□□□□□ -0.06
TSC2-220ENST00000568238 TRPC6Q9Y210 931 aa14.65□□□□□ -0.06
TSC2-220ENST00000568238 INSL6Q9Y581 213 aa14.65□□□□□ -0.06
TSC2-220ENST00000568238 RRN3P2A6NIE6 340 aa14.64□□□□□ -0.07
TSC2-220ENST00000568238 FAM86B1E9PN63 330 aa14.64□□□□□ -0.07
TSC2-220ENST00000568238 PFKFB2O60825 505 aa14.64□□□□□ -0.07
TSC2-220ENST00000568238 CHRNA1P02708 482 aa14.64□□□□□ -0.07
TSC2-220ENST00000568238 FAM86B2P0C5J1 330 aa14.64□□□□□ -0.07
TSC2-220ENST00000568238 GHRP10912 638 aa14.64□□□□□ -0.07
TSC2-220ENST00000568238 GNA11P29992 359 aa14.64□□□□□ -0.07
TSC2-220ENST00000568238 MRPS5P82675 430 aaKnown RBP14.64□□□□□ -0.07
TSC2-220ENST00000568238 MGAT3Q09327 533 aa14.64□□□□□ -0.07
TSC2-220ENST00000568238 PKN1Q16512 942 aa14.64□□□□□ -0.07
TSC2-220ENST00000568238 ME3Q16798 604 aa14.64□□□□□ -0.07
TSC2-220ENST00000568238 MARCH8Q5T0T0 291 aa14.64□□□□□ -0.07
TSC2-220ENST00000568238 KRT40Q6A162 431 aa14.64□□□□□ -0.07
TSC2-220ENST00000568238 PLPPR4Q7Z2D5 763 aa14.64□□□□□ -0.07
TSC2-220ENST00000568238 PLA2G4DQ86XP0 818 aa14.64□□□□□ -0.07
TSC2-220ENST00000568238 CCDC148Q8NFR7 591 aa14.64□□□□□ -0.07
TSC2-220ENST00000568238 BICD2Q8TD16 824 aa14.64□□□□□ -0.07
TSC2-220ENST00000568238 SLC26A6Q9BXS9 759 aa14.64□□□□□ -0.07
TSC2-220ENST00000568238 RNF26Q9BY78 433 aaPredicted RBP14.64□□□□□ -0.07
TSC2-220ENST00000568238 LIMCH1Q9UPQ0 1083 aa14.64□□□□□ -0.07
TSC2-220ENST00000568238 DDX39AO00148 427 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms