RNA–Protein interactions for RNA: ENST00000566062.1

SUB1P4-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 4, humanhuman

BASIC

Gene SUB1P4, Length 339 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P4-201ENST00000566062 CEP128Q6ZU80 1094 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 FRMD7Q6ZUT3 714 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 C22orf34Q6ZV56 151 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 OTOP3Q7RTS5 596 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 NLRP10Q86W26 655 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 SPACA3Q8IXA5 215 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 SIRT2Q8IXJ6 389 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 GRAMD1CQ8IYS0 662 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 CMTR2Q8IYT2 770 aaKnown RBP2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 MIER2Q8N344 545 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 LZTR1Q8N653 840 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 ZNF610Q8N9Z0 462 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 VPS37AQ8NEZ2 397 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 NETO1Q8TDF5 533 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 EAF2Q96CJ1 260 aaPredicted RBP2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 TEKT5Q96M29 485 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 CAMKK2Q96RR4 588 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 JMJD8Q96S16 334 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 SSBP4Q9BWG4 385 aaPredicted RBP2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 SLC13A1Q9BZW2 595 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 ZDHHC5Q9C0B5 715 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 SLC12A5Q9H2X9 1139 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 PPCSQ9HAB8 311 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 RXFP1Q9HBX9 757 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 PRDM11Q9NQV5 511 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 ACSS2Q9NR19 701 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 SEMA3GQ9NS98 782 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 SLAMF8Q9P0V8 285 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 PUF60Q9UHX1 559 aaKnown RBP2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 MSRAQ9UJ68 235 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 INTUQ9ULD6 942 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 SPO11Q9Y5K1 396 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 ATP23Q9Y6H3 246 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 RB1CC1Q8TDY2 1594 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 HECW2Q9P2P5 1572 aa2.34□□□□□ -2.03
SUB1P4-201ENST00000566062 PRAMEF22A3QJZ6 481 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 FZD9O00144 591 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 WNT9AO14904 365 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 FOXP2O15409 715 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 GSC2O15499 205 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 CREB3O43889 395 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 USP2O75604 605 aaPredicted RBP2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 OFD1O75665 1012 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 NTRK1P04629 796 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 CYP17A1P05093 508 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 VCAM1P19320 739 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 LPOP22079 712 aaPredicted RBP2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 CD40P25942 277 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 CD96P40200 585 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 CLCN7P51798 805 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 HK2P52789 917 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 RTP1P59025 263 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 SMAD3P84022 425 aaKnown RBP2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 CDK17Q00537 523 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 ADCY1Q08828 1119 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 NFIAQ12857 509 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 IKZF1Q13422 519 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 TUSC3Q13454 348 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 GTF2H3Q13889 308 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 ZNF267Q14586 743 aaPredicted RBP2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 KIR3DS1Q14943 382 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 SEC23AQ15436 765 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 ZRSR2Q15696 482 aaKnown RBP2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 SMAD2Q15796 467 aaKnown RBP2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 GAB4Q2WGN9 574 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 PRAMEF18Q5VWM3 479 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 STEAP3Q658P3 488 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 CREB3L3Q68CJ9 461 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 BICRALQ6AI39 1079 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 TIGD7Q6NT04 549 aaPredicted RBP2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 TMED8Q6PL24 325 aaPredicted RBP2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 PRR23CQ6ZRP0 262 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 CCDC149Q6ZUS6 474 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 EPM2AIP1Q7L775 607 aaPredicted RBP2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 OTOP1Q7RTM1 612 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 TMPRSS7Q7RTY8 843 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 THAP5Q7Z6K1 395 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 CATIPQ7Z7H3 387 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 NLGN4XQ8N0W4 816 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 CAMKK1Q8N5S9 505 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 SAMD3Q8N6K7 520 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 HIPK4Q8NE63 616 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 NUP43Q8NFH3 380 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 PJA1Q8NG27 643 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 SVIPQ8NHG7 77 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 SH3RF2Q8TEC5 729 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 LMBR1Q8WVP7 490 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 JADE3Q92613 823 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 ZNF496Q96IT1 587 aaPredicted RBP2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 HRASLS5Q96KN8 279 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 FCRL2Q96LA5 508 aaPredicted RBP2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 TUBGCP5Q96RT8 1024 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 PCGF6Q9BYE7 350 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 CSRNP2Q9H175 543 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 CDIP1Q9H305 208 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 ADAMTS10Q9H324 1103 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 SEMA4AQ9H3S1 761 aa2.33□□□□□ -2.04
SUB1P4-201ENST00000566062 EPB41L1Q9H4G0 881 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms