RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 PCYT2Q99447 389 aa15.66■□□□□ 0.1
HERPUD1-210ENST00000565966 SETD4Q9NVD3 440 aa15.66■□□□□ 0.1
HERPUD1-210ENST00000565966 TCEAL9Q9UHQ7 104 aa15.66■□□□□ 0.1
HERPUD1-210ENST00000565966 NRCAMQ92823 1304 aa15.66■□□□□ 0.1
HERPUD1-210ENST00000565966 LOXHD1Q8IVV2 1947 aa15.65■□□□□ 0.1
HERPUD1-210ENST00000565966 IGKV6D-21A0A0A0MT36 114 aa15.65■□□□□ 0.1
HERPUD1-210ENST00000565966 MSH4O15457 936 aa15.65■□□□□ 0.1
HERPUD1-210ENST00000565966 TREHO43280 583 aa15.65■□□□□ 0.1
HERPUD1-210ENST00000565966 PARNO95453 639 aaKnown RBP15.65■□□□□ 0.1
HERPUD1-210ENST00000565966 CCNE2O96020 404 aa15.65■□□□□ 0.1
HERPUD1-210ENST00000565966 FGBP02675 491 aa15.65■□□□□ 0.1
HERPUD1-210ENST00000565966 PFKMP08237 780 aa15.65■□□□□ 0.1
HERPUD1-210ENST00000565966 CKBP12277 381 aa15.65■□□□□ 0.1
HERPUD1-210ENST00000565966 SELPP16109 830 aa15.65■□□□□ 0.1
HERPUD1-210ENST00000565966 MARK3P27448 753 aa15.65■□□□□ 0.1
HERPUD1-210ENST00000565966 GJB2P29033 226 aa15.65■□□□□ 0.1
HERPUD1-210ENST00000565966 ADAM17P78536 824 aa15.65■□□□□ 0.1
HERPUD1-210ENST00000565966 KRT76Q01546 638 aa15.65■□□□□ 0.1
HERPUD1-210ENST00000565966 LETM2Q2VYF4 491 aa15.65■□□□□ 0.1
HERPUD1-210ENST00000565966 ABHD15Q6UXT9 468 aa15.65■□□□□ 0.1
HERPUD1-210ENST00000565966 SERINC5Q86VE9 423 aa15.65■□□□□ 0.1
HERPUD1-210ENST00000565966 SNX21Q969T3 373 aa15.65■□□□□ 0.1
HERPUD1-210ENST00000565966 LRCH3Q96II8 777 aa15.65■□□□□ 0.1
HERPUD1-210ENST00000565966 SMC3Q9UQE7 1217 aa15.65■□□□□ 0.1
HERPUD1-210ENST00000565966 KIF3AQ9Y496 699 aa15.65■□□□□ 0.1
HERPUD1-210ENST00000565966 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.65■□□□□ 0.1
HERPUD1-210ENST00000565966 SZT2Q5T011 3432 aa15.65■□□□□ 0.1
HERPUD1-210ENST00000565966 SLC26A2P50443 739 aa15.64■□□□□ 0.09
HERPUD1-210ENST00000565966 MYO9BQ13459 2157 aa15.64■□□□□ 0.09
HERPUD1-210ENST00000565966 SAFBQ15424 915 aaKnown RBP eCLIP15.64■□□□□ 0.09
HERPUD1-210ENST00000565966 TRIM71Q2Q1W2 868 aaKnown RBP15.64■□□□□ 0.09
HERPUD1-210ENST00000565966 FAM160B1Q5W0V3 765 aa15.64■□□□□ 0.09
HERPUD1-210ENST00000565966 GPR153Q6NV75 609 aa15.64■□□□□ 0.09
HERPUD1-210ENST00000565966 MIS18BP1Q6P0N0 1132 aa15.64■□□□□ 0.09
HERPUD1-210ENST00000565966 SMAP1Q8IYB5 467 aaPredicted RBP15.64■□□□□ 0.09
HERPUD1-210ENST00000565966 LMBR1Q8WVP7 490 aa15.64■□□□□ 0.09
HERPUD1-210ENST00000565966 HERVK_113Q902F9 699 aa15.64■□□□□ 0.09
HERPUD1-210ENST00000565966 SLC5A5Q92911 643 aa15.64■□□□□ 0.09
HERPUD1-210ENST00000565966 RIT2Q99578 217 aa15.64■□□□□ 0.09
HERPUD1-210ENST00000565966 MTIF3Q9H2K0 278 aaKnown RBP15.64■□□□□ 0.09
HERPUD1-210ENST00000565966 PCDHA10Q9Y5I2 948 aa15.64■□□□□ 0.09
HERPUD1-210ENST00000565966 LAMA2P24043 3122 aaKnown RBP15.64■□□□□ 0.09
HERPUD1-210ENST00000565966 GBF1Q92538 1859 aa15.63■□□□□ 0.09
HERPUD1-210ENST00000565966 RRN3P2A6NIE6 340 aa15.63■□□□□ 0.09
HERPUD1-210ENST00000565966 K7ELQ4 463 aaPredicted RBP15.63■□□□□ 0.09
HERPUD1-210ENST00000565966 BACH1O14867 736 aa15.63■□□□□ 0.09
HERPUD1-210ENST00000565966 GAS7O60861 476 aa15.63■□□□□ 0.09
HERPUD1-210ENST00000565966 GCFC2P16383 781 aaKnown RBP15.63■□□□□ 0.09
HERPUD1-210ENST00000565966 PPFIA1Q13136 1202 aa15.63■□□□□ 0.09
HERPUD1-210ENST00000565966 RASIP1Q5U651 963 aa15.63■□□□□ 0.09
HERPUD1-210ENST00000565966 PPP4R3AQ6IN85 833 aa15.63■□□□□ 0.09
HERPUD1-210ENST00000565966 SWSAP1Q6NVH7 229 aa15.63■□□□□ 0.09
HERPUD1-210ENST00000565966 LRRC8DQ7L1W4 858 aa15.63■□□□□ 0.09
HERPUD1-210ENST00000565966 DEFB128Q7Z7B8 93 aa15.63■□□□□ 0.09
HERPUD1-210ENST00000565966 WNT8BQ93098 351 aa15.63■□□□□ 0.09
HERPUD1-210ENST00000565966 VWCEQ96DN2 955 aa15.63■□□□□ 0.09
HERPUD1-210ENST00000565966 NAP1L4Q99733 375 aaKnown RBP15.63■□□□□ 0.09
HERPUD1-210ENST00000565966 FOXP1Q9H334 677 aaPredicted RBP15.63■□□□□ 0.09
HERPUD1-210ENST00000565966 ZNF302Q9NR11 478 aa15.63■□□□□ 0.09
HERPUD1-210ENST00000565966 DDX25Q9UHL0 483 aaKnown RBP15.63■□□□□ 0.09
HERPUD1-210ENST00000565966 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.62■□□□□ 0.09
HERPUD1-210ENST00000565966 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.62■□□□□ 0.09
HERPUD1-210ENST00000565966 SLC37A4O43826 429 aa15.62■□□□□ 0.09
HERPUD1-210ENST00000565966 CAND2O75155 1236 aa15.62■□□□□ 0.09
HERPUD1-210ENST00000565966 PSAPP07602 524 aa15.62■□□□□ 0.09
HERPUD1-210ENST00000565966 ACTN1P12814 892 aa15.62■□□□□ 0.09
HERPUD1-210ENST00000565966 INSRRP14616 1297 aa15.62■□□□□ 0.09
HERPUD1-210ENST00000565966 THPOP40225 353 aa15.62■□□□□ 0.09
HERPUD1-210ENST00000565966 PLCB4Q15147 1175 aa15.62■□□□□ 0.09
HERPUD1-210ENST00000565966 GRIK4Q16099 956 aa15.62■□□□□ 0.09
HERPUD1-210ENST00000565966 ZNF618Q5T7W0 954 aa15.62■□□□□ 0.09
HERPUD1-210ENST00000565966 LRCH2Q5VUJ6 765 aa15.62■□□□□ 0.09
HERPUD1-210ENST00000565966 OTOP2Q7RTS6 562 aa15.62■□□□□ 0.09
HERPUD1-210ENST00000565966 CCDC60Q8IWA6 550 aaPredicted RBP15.62■□□□□ 0.09
HERPUD1-210ENST00000565966 TEKT3Q9BXF9 490 aa15.62■□□□□ 0.09
HERPUD1-210ENST00000565966 TRPC6Q9Y210 931 aa15.62■□□□□ 0.09
HERPUD1-210ENST00000565966 SAMM50Q9Y512 469 aa15.62■□□□□ 0.09
HERPUD1-210ENST00000565966 POTEB3A0JP26 581 aa15.61■□□□□ 0.09
HERPUD1-210ENST00000565966 WDR64B1ANS9 1081 aa15.61■□□□□ 0.09
HERPUD1-210ENST00000565966 RSPH10B2B2RC85 870 aa15.61■□□□□ 0.09
HERPUD1-210ENST00000565966 KIF28PB7ZC32 967 aa15.61■□□□□ 0.09
HERPUD1-210ENST00000565966 HBP1O60381 514 aa15.61■□□□□ 0.09
HERPUD1-210ENST00000565966 CCNT1O60563 726 aaKnown RBP15.61■□□□□ 0.09
HERPUD1-210ENST00000565966 PSMD10O75832 226 aa15.61■□□□□ 0.09
HERPUD1-210ENST00000565966 RSPH10BP0C881 870 aa15.61■□□□□ 0.09
HERPUD1-210ENST00000565966 SFNP31947 248 aa15.61■□□□□ 0.09
HERPUD1-210ENST00000565966 SMAD3P84022 425 aaKnown RBP15.61■□□□□ 0.09
HERPUD1-210ENST00000565966 TAF2Q6P1X5 1199 aa15.61■□□□□ 0.09
HERPUD1-210ENST00000565966 PDXDC2PQ6P474 469 aa15.61■□□□□ 0.09
HERPUD1-210ENST00000565966 POTEBQ6S5H4 581 aa15.61■□□□□ 0.09
HERPUD1-210ENST00000565966 ETNPPLQ8TBG4 499 aa15.61■□□□□ 0.09
HERPUD1-210ENST00000565966 GJA10Q969M2 543 aa15.61■□□□□ 0.09
HERPUD1-210ENST00000565966 FTOQ9C0B1 505 aaKnown RBP eCLIP15.61■□□□□ 0.09
HERPUD1-210ENST00000565966 DISC1Q9NRI5 854 aa15.61■□□□□ 0.09
HERPUD1-210ENST00000565966 TUBE1Q9UJT0 475 aa15.61■□□□□ 0.09
HERPUD1-210ENST00000565966 MAFBQ9Y5Q3 323 aaPredicted RBP15.61■□□□□ 0.09
HERPUD1-210ENST00000565966 MBLAC1A4D2B0 266 aaPredicted RBP15.6■□□□□ 0.09
HERPUD1-210ENST00000565966 WNT7AO00755 349 aa15.6■□□□□ 0.09
HERPUD1-210ENST00000565966 CXCL10P02778 98 aa15.6■□□□□ 0.09
HERPUD1-210ENST00000565966 U2AF2P26368 475 aaKnown RBP eCLIP15.6■□□□□ 0.096e-8■■□□□ 12
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms