RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 HAS1Q92839 578 aa14.18□□□□□ -0.14
SHCBP1-204ENST00000565887 RAB34Q9BZG1 259 aa14.18□□□□□ -0.14
SHCBP1-204ENST00000565887 PDLIM7Q9NR12 457 aa14.18□□□□□ -0.14
SHCBP1-204ENST00000565887 DNAH12Q6ZR08 3092 aa14.18□□□□□ -0.14
SHCBP1-204ENST00000565887 POTEB3A0JP26 581 aa14.17□□□□□ -0.14
SHCBP1-204ENST00000565887 KIF28PB7ZC32 967 aa14.17□□□□□ -0.14
SHCBP1-204ENST00000565887 H0YGN5 161 aa14.17□□□□□ -0.14
SHCBP1-204ENST00000565887 STX6O43752 255 aa14.17□□□□□ -0.14
SHCBP1-204ENST00000565887 B4GALT4O60513 344 aa14.17□□□□□ -0.14
SHCBP1-204ENST00000565887 TIMP1P01033 207 aa14.17□□□□□ -0.14
SHCBP1-204ENST00000565887 P4HBP07237 508 aaKnown RBP14.17□□□□□ -0.14
SHCBP1-204ENST00000565887 SMIM10L2AP0DMW4 78 aa14.17□□□□□ -0.14
SHCBP1-204ENST00000565887 SMIM10L2BP0DMW5 78 aa14.17□□□□□ -0.14
SHCBP1-204ENST00000565887 HOXC8P31273 242 aa14.17□□□□□ -0.14
SHCBP1-204ENST00000565887 PDIA5Q14554 519 aa14.17□□□□□ -0.14
SHCBP1-204ENST00000565887 EPHA7Q15375 998 aa14.17□□□□□ -0.14
SHCBP1-204ENST00000565887 ZNF174Q15697 407 aa14.17□□□□□ -0.14
SHCBP1-204ENST00000565887 TMEM266Q2M3C6 531 aa14.17□□□□□ -0.14
SHCBP1-204ENST00000565887 ZNF484Q5JVG2 852 aa14.17□□□□□ -0.14
SHCBP1-204ENST00000565887 POTEBQ6S5H4 581 aa14.17□□□□□ -0.14
SHCBP1-204ENST00000565887 POTEDQ86YR6 584 aa14.17□□□□□ -0.14
SHCBP1-204ENST00000565887 CKAP2LQ8IYA6 745 aa14.17□□□□□ -0.14
SHCBP1-204ENST00000565887 RETREG2Q8NC44 543 aa14.17□□□□□ -0.14
SHCBP1-204ENST00000565887 CAGE1Q8TC20 777 aa14.17□□□□□ -0.14
SHCBP1-204ENST00000565887 PCYT2Q99447 389 aa14.17□□□□□ -0.14
SHCBP1-204ENST00000565887 TRPV6Q9H1D0 765 aa14.17□□□□□ -0.14
SHCBP1-204ENST00000565887 UNC45AQ9H3U1 944 aa14.17□□□□□ -0.14
SHCBP1-204ENST00000565887 RNPEPQ9H4A4 650 aa14.17□□□□□ -0.14
SHCBP1-204ENST00000565887 TTC12Q9H892 705 aaPredicted RBP14.17□□□□□ -0.14
SHCBP1-204ENST00000565887 PRDM5Q9NQX1 630 aaPredicted RBP14.17□□□□□ -0.14
SHCBP1-204ENST00000565887 TBX21Q9UL17 535 aa14.17□□□□□ -0.14
SHCBP1-204ENST00000565887 CEP131Q9UPN4 1083 aa14.17□□□□□ -0.14
SHCBP1-204ENST00000565887 MKI67P46013 3256 aaKnown RBP14.17□□□□□ -0.14
SHCBP1-204ENST00000565887 KAT6AQ92794 2004 aa14.16□□□□□ -0.14
SHCBP1-204ENST00000565887 PITPNM1O00562 1244 aa14.16□□□□□ -0.14
SHCBP1-204ENST00000565887 CAND2O75155 1236 aa14.16□□□□□ -0.14
SHCBP1-204ENST00000565887 PRPHP41219 470 aa14.16□□□□□ -0.14
SHCBP1-204ENST00000565887 TXKP42681 527 aa14.16□□□□□ -0.14
SHCBP1-204ENST00000565887 PSMC5P62195 406 aa14.16□□□□□ -0.14
SHCBP1-204ENST00000565887 PPFIA1Q13136 1202 aa14.16□□□□□ -0.14
SHCBP1-204ENST00000565887 GDF6Q6KF10 455 aaPredicted RBP14.16□□□□□ -0.14
SHCBP1-204ENST00000565887 EXOC8Q8IYI6 725 aa14.16□□□□□ -0.14
SHCBP1-204ENST00000565887 TMEM199Q8N511 208 aa14.16□□□□□ -0.14
SHCBP1-204ENST00000565887 NEK9Q8TD19 979 aa14.16□□□□□ -0.14
SHCBP1-204ENST00000565887 ATP8B4Q8TF62 1192 aa14.16□□□□□ -0.14
SHCBP1-204ENST00000565887 UIMC1Q96RL1 719 aa14.16□□□□□ -0.14
SHCBP1-204ENST00000565887 HIPK3Q9H422 1215 aa14.16□□□□□ -0.14
SHCBP1-204ENST00000565887 GABBR1Q9UBS5 961 aa14.16□□□□□ -0.14
SHCBP1-204ENST00000565887 VAV3Q9UKW4 847 aa14.16□□□□□ -0.14
SHCBP1-204ENST00000565887 TRPC6Q9Y210 931 aa14.16□□□□□ -0.14
SHCBP1-204ENST00000565887 COL1A2P08123 1366 aa14.16□□□□□ -0.14
SHCBP1-204ENST00000565887 DOCK5Q9H7D0 1870 aa14.16□□□□□ -0.14
SHCBP1-204ENST00000565887 TNRC18O15417 2968 aaPredicted RBP14.16□□□□□ -0.14
SHCBP1-204ENST00000565887 TRIM43BA6NCK2 446 aa14.15□□□□□ -0.14
SHCBP1-204ENST00000565887 CHMP2AO43633 222 aa14.15□□□□□ -0.14
SHCBP1-204ENST00000565887 OR52Z1P0C646 297 aa14.15□□□□□ -0.14
SHCBP1-204ENST00000565887 BMP8BP34820 402 aa14.15□□□□□ -0.14
SHCBP1-204ENST00000565887 QARSP47897 775 aaKnown RBP14.15□□□□□ -0.14
SHCBP1-204ENST00000565887 TOB1P50616 345 aaPredicted RBP14.15□□□□□ -0.14
SHCBP1-204ENST00000565887 PTGDRQ13258 359 aa14.15□□□□□ -0.14
SHCBP1-204ENST00000565887 PLCB4Q15147 1175 aa14.15□□□□□ -0.14
SHCBP1-204ENST00000565887 ARL6IP4Q66PJ3 421 aaKnown RBP14.15□□□□□ -0.14
SHCBP1-204ENST00000565887 MFSD5Q6N075 450 aa14.15□□□□□ -0.14
SHCBP1-204ENST00000565887 TAF2Q6P1X5 1199 aa14.15□□□□□ -0.14
SHCBP1-204ENST00000565887 RSPH3Q86UC2 560 aa14.15□□□□□ -0.14
SHCBP1-204ENST00000565887 TRIM50Q86XT4 487 aa14.15□□□□□ -0.14
SHCBP1-204ENST00000565887 CCDC60Q8IWA6 550 aaPredicted RBP14.15□□□□□ -0.14
SHCBP1-204ENST00000565887 RPUSD2Q8IZ73 545 aaKnown RBP14.15□□□□□ -0.14
SHCBP1-204ENST00000565887 ZNF710Q8N1W2 664 aa14.15□□□□□ -0.14
SHCBP1-204ENST00000565887 ERMNQ8TAM6 284 aa14.15□□□□□ -0.14
SHCBP1-204ENST00000565887 TRIM43Q96BQ3 446 aaPredicted RBP14.15□□□□□ -0.14
SHCBP1-204ENST00000565887 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.15□□□□□ -0.14
SHCBP1-204ENST00000565887 FOXD4L1Q9NU39 408 aa14.15□□□□□ -0.14
SHCBP1-204ENST00000565887 TRMT13Q9NUP7 481 aaKnown RBP14.15□□□□□ -0.14
SHCBP1-204ENST00000565887 ZMYND8Q9ULU4 1186 aaPredicted RBP14.15□□□□□ -0.14
SHCBP1-204ENST00000565887 TELO2Q9Y4R8 837 aa14.15□□□□□ -0.14
SHCBP1-204ENST00000565887 PPME1Q9Y570 386 aa14.15□□□□□ -0.14
SHCBP1-204ENST00000565887 ALPK3Q96L96 1907 aa14.14□□□□□ -0.15
SHCBP1-204ENST00000565887 MBLAC1A4D2B0 266 aaPredicted RBP14.14□□□□□ -0.15
SHCBP1-204ENST00000565887 MAGEB2O15479 319 aa14.14□□□□□ -0.15
SHCBP1-204ENST00000565887 XRCC6P12956 609 aaKnown RBP eCLIP14.14□□□□□ -0.15
SHCBP1-204ENST00000565887 INSRRP14616 1297 aa14.14□□□□□ -0.15
SHCBP1-204ENST00000565887 MUTP22033 750 aa14.14□□□□□ -0.15
SHCBP1-204ENST00000565887 MARK3P27448 753 aa14.14□□□□□ -0.15
SHCBP1-204ENST00000565887 RFC2P35250 354 aa14.14□□□□□ -0.15
SHCBP1-204ENST00000565887 ADAM17P78536 824 aa14.14□□□□□ -0.15
SHCBP1-204ENST00000565887 RBL2Q08999 1139 aa14.14□□□□□ -0.15
SHCBP1-204ENST00000565887 GRIK4Q16099 956 aa14.14□□□□□ -0.15
SHCBP1-204ENST00000565887 XKR3Q5GH77 459 aa14.14□□□□□ -0.15
SHCBP1-204ENST00000565887 DTHD1Q6ZMT9 781 aa14.14□□□□□ -0.15
SHCBP1-204ENST00000565887 FAM43BQ6ZT52 329 aaPredicted RBP14.14□□□□□ -0.15
SHCBP1-204ENST00000565887 OTUD6AQ7L8S5 288 aa14.14□□□□□ -0.15
SHCBP1-204ENST00000565887 SH3RF1Q7Z6J0 888 aa14.14□□□□□ -0.15
SHCBP1-204ENST00000565887 RPAINQ86UA6 219 aa14.14□□□□□ -0.15
SHCBP1-204ENST00000565887 SERINC5Q86VE9 423 aa14.14□□□□□ -0.15
SHCBP1-204ENST00000565887 NME8Q8N427 588 aa14.14□□□□□ -0.15
SHCBP1-204ENST00000565887 C4orf32Q8N8J7 132 aa14.14□□□□□ -0.15
SHCBP1-204ENST00000565887 NOC4LQ9BVI4 516 aaKnown RBP14.14□□□□□ -0.15
SHCBP1-204ENST00000565887 ZSWIM4Q9H7M6 989 aa14.14□□□□□ -0.15
SHCBP1-204ENST00000565887 SETD4Q9NVD3 440 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms