RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 SV2BQ7L1I2 683 aa21.35■■□□□ 1.01
CSPG4P13-201ENST00000565545 SPATA20Q8TB22 786 aa21.35■■□□□ 1.01
CSPG4P13-201ENST00000565545 FGD4Q96M96 766 aa21.35■■□□□ 1.01
CSPG4P13-201ENST00000565545 UIMC1Q96RL1 719 aa21.35■■□□□ 1.01
CSPG4P13-201ENST00000565545 UNC45AQ9H3U1 944 aa21.35■■□□□ 1.01
CSPG4P13-201ENST00000565545 SLC5A4Q9NY91 659 aa21.35■■□□□ 1.01
CSPG4P13-201ENST00000565545 PCDHA5Q9Y5H7 936 aa21.35■■□□□ 1.01
CSPG4P13-201ENST00000565545 DLL1O00548 723 aa21.34■■□□□ 1.01
CSPG4P13-201ENST00000565545 RGS20O76081 388 aa21.34■■□□□ 1.01
CSPG4P13-201ENST00000565545 TGFB3P10600 412 aa21.34■■□□□ 1.01
CSPG4P13-201ENST00000565545 PRKAR2AP13861 404 aaKnown RBP21.34■■□□□ 1.01
CSPG4P13-201ENST00000565545 SYN1P17600 705 aa21.34■■□□□ 1.01
CSPG4P13-201ENST00000565545 ADORA2AP29274 412 aa21.34■■□□□ 1.01
CSPG4P13-201ENST00000565545 SFNP31947 248 aa21.34■■□□□ 1.01
CSPG4P13-201ENST00000565545 BMP8BP34820 402 aa21.34■■□□□ 1.01
CSPG4P13-201ENST00000565545 NLRP12P59046 1061 aa21.34■■□□□ 1.01
CSPG4P13-201ENST00000565545 DPYDQ12882 1025 aa21.34■■□□□ 1.01
CSPG4P13-201ENST00000565545 ITGB3BPQ13352 177 aaPredicted RBP21.34■■□□□ 1.01
CSPG4P13-201ENST00000565545 GRB14Q14449 540 aa21.34■■□□□ 1.01
CSPG4P13-201ENST00000565545 CATSPER3Q86XQ3 398 aa21.34■■□□□ 1.01
CSPG4P13-201ENST00000565545 GIMAP8Q8ND71 665 aaPredicted RBP21.34■■□□□ 1.01
CSPG4P13-201ENST00000565545 SOCS4Q8WXH5 440 aa21.34■■□□□ 1.01
CSPG4P13-201ENST00000565545 LARP4BQ92615 738 aaKnown RBP21.34■■□□□ 1.01
CSPG4P13-201ENST00000565545 RAD54LQ92698 747 aa21.34■■□□□ 1.01
CSPG4P13-201ENST00000565545 GSDMAQ96QA5 445 aa21.34■■□□□ 1.01
CSPG4P13-201ENST00000565545 PLIN2Q99541 437 aa21.34■■□□□ 1.01
CSPG4P13-201ENST00000565545 GDF15Q99988 308 aa21.34■■□□□ 1.01
CSPG4P13-201ENST00000565545 HSD17B14Q9BPX1 270 aa21.34■■□□□ 1.01
CSPG4P13-201ENST00000565545 SENP7Q9BQF6 1050 aa21.34■■□□□ 1.01
CSPG4P13-201ENST00000565545 EIF2AK1Q9BQI3 630 aaKnown RBP21.34■■□□□ 1.01
CSPG4P13-201ENST00000565545 SZT2Q5T011 3432 aa21.33■■□□□ 1.01
CSPG4P13-201ENST00000565545 DOCK3Q8IZD9 2030 aa21.33■■□□□ 1.01
CSPG4P13-201ENST00000565545 EML1O00423 815 aa21.33■■□□□ 1.01
CSPG4P13-201ENST00000565545 MED24O75448 989 aa21.33■■□□□ 1.01
CSPG4P13-201ENST00000565545 SPATA31C1P0DKV0 1188 aa21.33■■□□□ 1.01
CSPG4P13-201ENST00000565545 JAK3P52333 1124 aa21.33■■□□□ 1.01
CSPG4P13-201ENST00000565545 ZNF746Q6NUN9 644 aaPredicted RBP21.33■■□□□ 1.01
CSPG4P13-201ENST00000565545 MIER3Q7Z3K6 550 aa21.33■■□□□ 1.01
CSPG4P13-201ENST00000565545 BLOC1S4Q9NUP1 217 aa21.33■■□□□ 1.01
CSPG4P13-201ENST00000565545 OGDHLQ9ULD0 1010 aa21.33■■□□□ 1.01
CSPG4P13-201ENST00000565545 KIAA1024Q9UPX6 916 aa21.33■■□□□ 1.01
CSPG4P13-201ENST00000565545 LOXHD1Q8IVV2 1947 aa21.33■■□□□ 1
CSPG4P13-201ENST00000565545 ATP9AO75110 1047 aa21.32■■□□□ 1
CSPG4P13-201ENST00000565545 PRR29P0C7W0 189 aa21.32■■□□□ 1
CSPG4P13-201ENST00000565545 XRCC5P13010 732 aaKnown RBP21.32■■□□□ 1
CSPG4P13-201ENST00000565545 KCNA2P16389 499 aa21.32■■□□□ 1
CSPG4P13-201ENST00000565545 MRE11P49959 708 aa21.32■■□□□ 1
CSPG4P13-201ENST00000565545 L1TD1Q5T7N2 865 aaKnown RBP21.32■■□□□ 1
CSPG4P13-201ENST00000565545 TRMT44Q8IYL2 757 aaKnown RBP21.32■■□□□ 1
CSPG4P13-201ENST00000565545 GRAMD1CQ8IYS0 662 aa21.32■■□□□ 1
CSPG4P13-201ENST00000565545 ERCC4Q92889 916 aaPredicted RBP21.32■■□□□ 1
CSPG4P13-201ENST00000565545 MTRQ99707 1265 aa21.32■■□□□ 1
CSPG4P13-201ENST00000565545 C7orf25Q9BPX7 421 aa21.32■■□□□ 1
CSPG4P13-201ENST00000565545 NAT10Q9H0A0 1025 aaKnown RBP21.32■■□□□ 1
CSPG4P13-201ENST00000565545 RMND1Q9NWS8 449 aa21.32■■□□□ 1
CSPG4P13-201ENST00000565545 PKD2L1Q9P0L9 805 aa21.32■■□□□ 1
CSPG4P13-201ENST00000565545 POTEB3A0JP26 581 aa21.31■■□□□ 1
CSPG4P13-201ENST00000565545 CHMP2AO43633 222 aa21.31■■□□□ 1
CSPG4P13-201ENST00000565545 MNX1P50219 401 aaPredicted RBP21.31■■□□□ 1
CSPG4P13-201ENST00000565545 ECM1Q16610 540 aa21.31■■□□□ 1
CSPG4P13-201ENST00000565545 MAP3K21Q5TCX8 1036 aa21.31■■□□□ 1
CSPG4P13-201ENST00000565545 CNNM4Q6P4Q7 775 aa21.31■■□□□ 1
CSPG4P13-201ENST00000565545 POTEBQ6S5H4 581 aa21.31■■□□□ 1
CSPG4P13-201ENST00000565545 DPP9Q86TI2 863 aa21.31■■□□□ 1
CSPG4P13-201ENST00000565545 SMAP1Q8IYB5 467 aaPredicted RBP21.31■■□□□ 1
CSPG4P13-201ENST00000565545 LRRC15Q8TF66 581 aa21.31■■□□□ 1
CSPG4P13-201ENST00000565545 CCDC47Q96A33 483 aaKnown RBP21.31■■□□□ 1
CSPG4P13-201ENST00000565545 GTPBP4Q9BZE4 634 aaKnown RBP21.31■■□□□ 1
CSPG4P13-201ENST00000565545 DNM3Q9UQ16 869 aa21.31■■□□□ 1
CSPG4P13-201ENST00000565545 WDR64B1ANS9 1081 aa21.3■■□□□ 1
CSPG4P13-201ENST00000565545 DDX39AO00148 427 aaKnown RBP21.3■■□□□ 1
CSPG4P13-201ENST00000565545 COBLO75128 1261 aa21.3■■□□□ 1
CSPG4P13-201ENST00000565545 SLITRK3O94933 977 aa21.3■■□□□ 1
CSPG4P13-201ENST00000565545 P4HBP07237 508 aaKnown RBP21.3■■□□□ 1
CSPG4P13-201ENST00000565545 NEDD9Q14511 834 aa21.3■■□□□ 1
CSPG4P13-201ENST00000565545 ANO6Q4KMQ2 910 aa21.3■■□□□ 1
CSPG4P13-201ENST00000565545 MAMDC4Q6UXC1 1216 aa21.3■■□□□ 1
CSPG4P13-201ENST00000565545 SEPT14Q6ZU15 432 aa21.3■■□□□ 1
CSPG4P13-201ENST00000565545 MSL3Q8N5Y2 521 aaKnown RBP21.3■■□□□ 1
CSPG4P13-201ENST00000565545 FAM200AQ8TCP9 573 aa21.3■■□□□ 1
CSPG4P13-201ENST00000565545 RBSNQ9H1K0 784 aa21.3■■□□□ 1
CSPG4P13-201ENST00000565545 GRPEL1Q9HAV7 217 aa21.3■■□□□ 1
CSPG4P13-201ENST00000565545 BMP2KQ9NSY1 1161 aaPredicted RBP21.3■■□□□ 1
CSPG4P13-201ENST00000565545 MAN1B1Q9UKM7 699 aa21.3■■□□□ 1
CSPG4P13-201ENST00000565545 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.29■■□□□ 1
CSPG4P13-201ENST00000565545 RGS2P41220 211 aa21.29■■□□□ 1
CSPG4P13-201ENST00000565545 MAGEA10P43363 369 aaPredicted RBP21.29■■□□□ 1
CSPG4P13-201ENST00000565545 CUL4BQ13620 913 aa21.29■■□□□ 1
CSPG4P13-201ENST00000565545 MORC3Q14149 939 aa21.29■■□□□ 1
CSPG4P13-201ENST00000565545 KCNB1Q14721 858 aa21.29■■□□□ 1
CSPG4P13-201ENST00000565545 CT47A1Q5JQC4 288 aaPredicted RBP21.29■■□□□ 1
CSPG4P13-201ENST00000565545 MORN1Q5T089 497 aa21.29■■□□□ 1
CSPG4P13-201ENST00000565545 STAMQ92783 540 aa21.29■■□□□ 1
CSPG4P13-201ENST00000565545 DYDC2Q96IM9 177 aa21.29■■□□□ 1
CSPG4P13-201ENST00000565545 NACC1Q96RE7 527 aa21.29■■□□□ 1
CSPG4P13-201ENST00000565545 TRIM9Q9C026 710 aa21.29■■□□□ 1
CSPG4P13-201ENST00000565545 UBE2OQ9C0C9 1292 aaKnown RBP21.29■■□□□ 1
CSPG4P13-201ENST00000565545 JPH1Q9HDC5 661 aaPredicted RBP21.29■■□□□ 1
CSPG4P13-201ENST00000565545 SLC9A2Q9UBY0 812 aa21.29■■□□□ 1
CSPG4P13-201ENST00000565545 DACH1Q9UI36 760 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms