RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 FAM43BQ6ZT52 329 aaPredicted RBP10.54□□□□□ -0.72
VPS9D1-205ENST00000565452 RTN4RL1Q86UN2 441 aaPredicted RBP10.54□□□□□ -0.72
VPS9D1-205ENST00000565452 THNSL1Q8IYQ7 743 aa10.54□□□□□ -0.72
VPS9D1-205ENST00000565452 CRIPAKQ8N1N5 446 aa10.54□□□□□ -0.72
VPS9D1-205ENST00000565452 TDRD5Q8NAT2 981 aaKnown RBP10.54□□□□□ -0.72
VPS9D1-205ENST00000565452 CASP10Q92851 521 aa10.54□□□□□ -0.72
VPS9D1-205ENST00000565452 BORCS6Q96GS4 357 aa10.54□□□□□ -0.72
VPS9D1-205ENST00000565452 POMKQ9H5K3 350 aa10.54□□□□□ -0.72
VPS9D1-205ENST00000565452 TCP11L1Q9NUJ3 509 aa10.54□□□□□ -0.72
VPS9D1-205ENST00000565452 COL20A1Q9P218 1284 aa10.54□□□□□ -0.72
VPS9D1-205ENST00000565452 BAHCC1Q9P281 2608 aa10.54□□□□□ -0.72
VPS9D1-205ENST00000565452 ZNF215Q9UL58 517 aaPredicted RBP10.54□□□□□ -0.72
VPS9D1-205ENST00000565452 USTQ9Y2C2 406 aa10.54□□□□□ -0.72
VPS9D1-205ENST00000565452 PCDHB7Q9Y5E2 793 aa10.54□□□□□ -0.72
VPS9D1-205ENST00000565452 MYH4Q9Y623 1939 aa10.54□□□□□ -0.72
VPS9D1-205ENST00000565452 ATRXP46100 2492 aa10.53□□□□□ -0.72
VPS9D1-205ENST00000565452 ZFHX4Q86UP3 3567 aa10.53□□□□□ -0.72
VPS9D1-205ENST00000565452 PRR5-ARHGAP8B1AHC4 643 aa10.53□□□□□ -0.72
VPS9D1-205ENST00000565452 FSCN2O14926 492 aa10.53□□□□□ -0.72
VPS9D1-205ENST00000565452 ORC4O43929 436 aa10.53□□□□□ -0.72
VPS9D1-205ENST00000565452 CFBP00751 764 aa10.53□□□□□ -0.72
VPS9D1-205ENST00000565452 RPLP2P05387 115 aaKnown RBP10.53□□□□□ -0.72
VPS9D1-205ENST00000565452 ATXN1P54253 815 aaKnown RBP10.53□□□□□ -0.72
VPS9D1-205ENST00000565452 ARHGAP8P85298 464 aa10.53□□□□□ -0.72
VPS9D1-205ENST00000565452 SP2Q02086 613 aa10.53□□□□□ -0.72
VPS9D1-205ENST00000565452 COL9A2Q14055 689 aaPredicted RBP10.53□□□□□ -0.72
VPS9D1-205ENST00000565452 FBXO47Q5MNV8 452 aa10.53□□□□□ -0.72
VPS9D1-205ENST00000565452 CWF19L1Q69YN2 538 aaKnown RBP10.53□□□□□ -0.72
VPS9D1-205ENST00000565452 VSIG10LQ86VR7 867 aa10.53□□□□□ -0.72
VPS9D1-205ENST00000565452 DCLK2Q8N568 766 aa10.53□□□□□ -0.72
VPS9D1-205ENST00000565452 TOMM22Q9NS69 142 aa10.53□□□□□ -0.72
VPS9D1-205ENST00000565452 ECHDC1Q9NTX5 307 aa10.53□□□□□ -0.72
VPS9D1-205ENST00000565452 MAP3K20Q9NYL2 800 aaKnown RBP10.53□□□□□ -0.72
VPS9D1-205ENST00000565452 LZTS1Q9Y250 596 aa10.53□□□□□ -0.72
VPS9D1-205ENST00000565452 SQORQ9Y6N5 450 aa10.53□□□□□ -0.72
VPS9D1-205ENST00000565452 CHD6Q8TD26 2715 aa10.53□□□□□ -0.72
VPS9D1-205ENST00000565452 RALGAPA2Q2PPJ7 1873 aa10.53□□□□□ -0.72
VPS9D1-205ENST00000565452 CEP250Q9BV73 2442 aa10.52□□□□□ -0.73
VPS9D1-205ENST00000565452 SCG2P13521 617 aa10.52□□□□□ -0.73
VPS9D1-205ENST00000565452 RFX1P22670 979 aa10.52□□□□□ -0.73
VPS9D1-205ENST00000565452 KRT17Q04695 432 aa10.52□□□□□ -0.73
VPS9D1-205ENST00000565452 MGAT3Q09327 533 aa10.52□□□□□ -0.73
VPS9D1-205ENST00000565452 TDGQ13569 410 aa10.52□□□□□ -0.73
VPS9D1-205ENST00000565452 NEDD9Q14511 834 aa10.52□□□□□ -0.73
VPS9D1-205ENST00000565452 IER5Q5VY09 327 aa10.52□□□□□ -0.73
VPS9D1-205ENST00000565452 PLPP4Q5VZY2 271 aa10.52□□□□□ -0.73
VPS9D1-205ENST00000565452 SIX5Q8N196 739 aa10.52□□□□□ -0.73
VPS9D1-205ENST00000565452 LMBR1Q8WVP7 490 aa10.52□□□□□ -0.73
VPS9D1-205ENST00000565452 ACSF2Q96CM8 615 aaPredicted RBP10.52□□□□□ -0.73
VPS9D1-205ENST00000565452 TCF25Q9BQ70 676 aa10.52□□□□□ -0.73
VPS9D1-205ENST00000565452 PDCD2LQ9BRP1 358 aa10.52□□□□□ -0.73
VPS9D1-205ENST00000565452 UBA5Q9GZZ9 404 aa10.52□□□□□ -0.73
VPS9D1-205ENST00000565452 ENTPD7Q9NQZ7 604 aa10.52□□□□□ -0.73
VPS9D1-205ENST00000565452 CYP26B1Q9NR63 512 aa10.52□□□□□ -0.73
VPS9D1-205ENST00000565452 DBR1Q9UK59 544 aaKnown RBP10.52□□□□□ -0.73
VPS9D1-205ENST00000565452 SNHG28P0DPA3 235 aa10.51□□□□□ -0.73
VPS9D1-205ENST00000565452 RLBP1P12271 317 aa10.51□□□□□ -0.73
VPS9D1-205ENST00000565452 UBA1P22314 1058 aaKnown RBP10.51□□□□□ -0.73
VPS9D1-205ENST00000565452 CCND2P30279 289 aa10.51□□□□□ -0.73
VPS9D1-205ENST00000565452 CD52P31358 61 aa10.51□□□□□ -0.73
VPS9D1-205ENST00000565452 PLCB3Q01970 1234 aa10.51□□□□□ -0.73
VPS9D1-205ENST00000565452 TBC1D8BQ0IIM8 1120 aa10.51□□□□□ -0.73
VPS9D1-205ENST00000565452 BMS1Q14692 1282 aaKnown RBP10.51□□□□□ -0.73
VPS9D1-205ENST00000565452 CDC37Q16543 378 aaPredicted RBP10.51□□□□□ -0.73
VPS9D1-205ENST00000565452 UTP14CQ5TAP6 766 aaKnown RBP10.51□□□□□ -0.73
VPS9D1-205ENST00000565452 STOX1Q6ZVD7 989 aa10.51□□□□□ -0.73
VPS9D1-205ENST00000565452 TMC7Q7Z402 723 aa10.51□□□□□ -0.73
VPS9D1-205ENST00000565452 SAMD3Q8N6K7 520 aa10.51□□□□□ -0.73
VPS9D1-205ENST00000565452 DNAJB3Q8WWF6 145 aa10.51□□□□□ -0.73
VPS9D1-205ENST00000565452 MRPS27Q92552 414 aaKnown RBP10.51□□□□□ -0.73
VPS9D1-205ENST00000565452 SECISBP2LQ93073 1101 aaKnown RBP10.51□□□□□ -0.73
VPS9D1-205ENST00000565452 GPATCH3Q96I76 525 aa10.51□□□□□ -0.73
VPS9D1-205ENST00000565452 LRRCC1Q9C099 1032 aa10.51□□□□□ -0.73
VPS9D1-205ENST00000565452 AGO3Q9H9G7 860 aaKnown RBP10.51□□□□□ -0.73
VPS9D1-205ENST00000565452 ERVK-5Q9HDB9 667 aa10.51□□□□□ -0.73
VPS9D1-205ENST00000565452 ANAPC4Q9UJX5 808 aa10.51□□□□□ -0.73
VPS9D1-205ENST00000565452 CDY2AQ9Y6F7 541 aa10.51□□□□□ -0.73
VPS9D1-205ENST00000565452 CCDC171Q6TFL3 1326 aa10.51□□□□□ -0.73
VPS9D1-205ENST00000565452 LCTP09848 1927 aa10.5□□□□□ -0.73
VPS9D1-205ENST00000565452 EOMESO95936 686 aa10.5□□□□□ -0.73
VPS9D1-205ENST00000565452 CENPBP07199 599 aaPredicted RBP10.5□□□□□ -0.73
VPS9D1-205ENST00000565452 FGRP09769 529 aa10.5□□□□□ -0.73
VPS9D1-205ENST00000565452 SP9P0CG40 484 aa10.5□□□□□ -0.73
VPS9D1-205ENST00000565452 GOLGA8HP0CJ92 632 aa10.5□□□□□ -0.73
VPS9D1-205ENST00000565452 GATMP50440 423 aa10.5□□□□□ -0.73
VPS9D1-205ENST00000565452 APOBRQ0VD83 1088 aa10.5□□□□□ -0.73
VPS9D1-205ENST00000565452 AAMPQ13685 434 aa10.5□□□□□ -0.73
VPS9D1-205ENST00000565452 GNPTABQ3T906 1256 aa10.5□□□□□ -0.73
VPS9D1-205ENST00000565452 RRP12Q5JTH9 1297 aaKnown RBP10.5□□□□□ -0.73
VPS9D1-205ENST00000565452 VARS2Q5ST30 1063 aaKnown RBP10.5□□□□□ -0.73
VPS9D1-205ENST00000565452 METTL7BQ6UX53 244 aa10.5□□□□□ -0.73
VPS9D1-205ENST00000565452 CYFIP1Q7L576 1253 aa10.5□□□□□ -0.73
VPS9D1-205ENST00000565452 ADGRF4Q8IZF3 695 aa10.5□□□□□ -0.73
VPS9D1-205ENST00000565452 COLGALT1Q8NBJ5 622 aa10.5□□□□□ -0.73
VPS9D1-205ENST00000565452 RIN2Q8WYP3 895 aaPredicted RBP10.5□□□□□ -0.73
VPS9D1-205ENST00000565452 SEC62Q99442 399 aaKnown RBP10.5□□□□□ -0.73
VPS9D1-205ENST00000565452 GPR20Q99678 358 aa10.5□□□□□ -0.73
VPS9D1-205ENST00000565452 RTKNQ9BST9 563 aa10.5□□□□□ -0.73
VPS9D1-205ENST00000565452 TYW1Q9NV66 732 aaKnown RBP10.5□□□□□ -0.73
VPS9D1-205ENST00000565452 WNT16Q9UBV4 365 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms