RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, human

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIN3A-205	ENST00000564778	COPS5	Q92905	334 aa		11.03	□□□□□ -0.64
SIN3A-205	ENST00000564778	SYAP1	Q96A49	352 aa	Predicted RBP	11.03	□□□□□ -0.64
SIN3A-205	ENST00000564778	CDK5RAP3	Q96JB5	506 aa		11.03	□□□□□ -0.64
SIN3A-205	ENST00000564778	GPR20	Q99678	358 aa		11.03	□□□□□ -0.64
SIN3A-205	ENST00000564778	LXN	Q9BS40	222 aa		11.03	□□□□□ -0.64
SIN3A-205	ENST00000564778	MLXIP	Q9HAP2	919 aa		11.03	□□□□□ -0.64
SIN3A-205	ENST00000564778	BLOC1S4	Q9NUP1	217 aa		11.03	□□□□□ -0.64
SIN3A-205	ENST00000564778	TMEM63C	Q9P1W3	806 aa		11.03	□□□□□ -0.64
SIN3A-205	ENST00000564778	PTPN22	Q9Y2R2	807 aa		11.03	□□□□□ -0.64
SIN3A-205	ENST00000564778	TELO2	Q9Y4R8	837 aa		11.03	□□□□□ -0.64
SIN3A-205	ENST00000564778	EMSY	Q7Z589	1322 aa		11.03	□□□□□ -0.64
SIN3A-205	ENST00000564778	GSTTP1	A0A1W2PQM5	241 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	POTEF	A5A3E0	1075 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	SEPT4	O43236	478 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	LGR5	O75473	907 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	PRKAR2A	P13861	404 aa	Known RBP	11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	ELN	P15502	786 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	STAT6	P42226	847 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	QARS	P47897	775 aa	Known RBP	11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	PSMC5	P62195	406 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	NKX3-2	P78367	333 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	CYP4A11	Q02928	519 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	TNFAIP2	Q03169	654 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	CACNB2	Q08289	660 aa	Predicted RBP	11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	HSDL1	Q3SXM5	330 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	LONRF3	Q496Y0	759 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	TPRN	Q4KMQ1	711 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	PRAMEF19	Q5SWL8	479 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	CCDC183	Q5T5S1	534 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	RRAGB	Q5VZM2	374 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	POTEG	Q6S5H5	508 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	RBM43	Q6ZSC3	357 aa	Known RBP	11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	SH3RF1	Q7Z6J0	888 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	CCDC60	Q8IWA6	550 aa	Predicted RBP	11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	DHX37	Q8IY37	1157 aa	Known RBP	11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	C4orf19	Q8IY42	314 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	PDILT	Q8N807	584 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	AFAP1L1	Q8TED9	768 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	SEPT1	Q8WYJ6	367 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	RAD54L	Q92698	747 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	ATP6V0A1	Q93050	837 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	DHX58	Q96C10	678 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	DYDC2	Q96IM9	177 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	SPATA33	Q96N06	139 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	NUP62CL	Q9H1M0	184 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	ZSWIM4	Q9H7M6	989 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	KBTBD4	Q9NVX7	518 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	RGL1	Q9NZL6	768 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	WRAP73	Q9P2S5	460 aa	Predicted RBP	11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	FAM184B	Q9ULE4	1060 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	PTCH2	Q9Y6C5	1203 aa		11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778	MYH9	P35579	1960 aa	Known RBP	11.02	□□□□□ -0.65
SIN3A-205	ENST00000564778		A6NJR5	290 aa		11.01	□□□□□ -0.65
SIN3A-205	ENST00000564778	NOP56	O00567	594 aa	Known RBP	11.01	□□□□□ -0.65
SIN3A-205	ENST00000564778	CTAGE5	O15320	804 aa		11.01	□□□□□ -0.65
SIN3A-205	ENST00000564778	DKC1	O60832	514 aa	Known RBP eCLIP	11.01	□□□□□ -0.65
SIN3A-205	ENST00000564778	DUSP11	O75319	330 aa	Known RBP	11.01	□□□□□ -0.65
SIN3A-205	ENST00000564778	MYL1	P05976	194 aa		11.01	□□□□□ -0.65
SIN3A-205	ENST00000564778	TRIM32	Q13049	653 aa		11.01	□□□□□ -0.65
SIN3A-205	ENST00000564778	CTTN	Q14247	550 aa	Known RBP	11.01	□□□□□ -0.65
SIN3A-205	ENST00000564778	UGCG	Q16739	394 aa		11.01	□□□□□ -0.65
SIN3A-205	ENST00000564778	GJC2	Q5T442	439 aa	Predicted RBP	11.01	□□□□□ -0.65
SIN3A-205	ENST00000564778	KANK3	Q6NY19	840 aa		11.01	□□□□□ -0.65
SIN3A-205	ENST00000564778	CAVIN1	Q6NZI2	390 aa	Known RBP	11.01	□□□□□ -0.65
SIN3A-205	ENST00000564778	KCNK18	Q7Z418	384 aa		11.01	□□□□□ -0.65
SIN3A-205	ENST00000564778	TLK2	Q86UE8	772 aa		11.01	□□□□□ -0.65
SIN3A-205	ENST00000564778	CEP57L1	Q8IYX8	460 aa		11.01	□□□□□ -0.65
SIN3A-205	ENST00000564778	BANK1	Q8NDB2	785 aa		11.01	□□□□□ -0.65
SIN3A-205	ENST00000564778	CNNM3	Q8NE01	707 aa		11.01	□□□□□ -0.65
SIN3A-205	ENST00000564778	OR6J1	Q8NGC5	347 aa		11.01	□□□□□ -0.65
SIN3A-205	ENST00000564778	LARP4B	Q92615	738 aa	Known RBP	11.01	□□□□□ -0.65
SIN3A-205	ENST00000564778	CCDC34	Q96HJ3	373 aa		11.01	□□□□□ -0.65
SIN3A-205	ENST00000564778	PCYT2	Q99447	389 aa		11.01	□□□□□ -0.65
SIN3A-205	ENST00000564778	UPF3A	Q9H1J1	476 aa	Known RBP	11.01	□□□□□ -0.65
SIN3A-205	ENST00000564778	TNMD	Q9H2S6	317 aa		11.01	□□□□□ -0.65
SIN3A-205	ENST00000564778	SERTAD1	Q9UHV2	236 aa		11.01	□□□□□ -0.65
SIN3A-205	ENST00000564778	KIAA1024	Q9UPX6	916 aa		11.01	□□□□□ -0.65
SIN3A-205	ENST00000564778	SAMM50	Q9Y512	469 aa		11.01	□□□□□ -0.65
SIN3A-205	ENST00000564778	MAFB	Q9Y5Q3	323 aa	Predicted RBP	11.01	□□□□□ -0.65
SIN3A-205	ENST00000564778	BRCA2	P51587	3418 aa		11.01	□□□□□ -0.65
SIN3A-205	ENST00000564778	KIAA0100	Q14667	2235 aa	Known RBP	11	□□□□□ -0.65
SIN3A-205	ENST00000564778	ZNF862	O60290	1169 aa		11	□□□□□ -0.65
SIN3A-205	ENST00000564778	SORBS3	O60504	671 aa		11	□□□□□ -0.65
SIN3A-205	ENST00000564778	EYA4	O95677	639 aa		11	□□□□□ -0.65
SIN3A-205	ENST00000564778	INHA	P05111	366 aa		11	□□□□□ -0.65
SIN3A-205	ENST00000564778	MMP3	P08254	477 aa		11	□□□□□ -0.65
SIN3A-205	ENST00000564778	XRCC6	P12956	609 aa	Known RBP eCLIP	11	□□□□□ -0.65
SIN3A-205	ENST00000564778	PTGS1	P23219	599 aa		11	□□□□□ -0.65
SIN3A-205	ENST00000564778	GRK4	P32298	578 aa		11	□□□□□ -0.65
SIN3A-205	ENST00000564778	TCF7	P36402	384 aa	Predicted RBP	11	□□□□□ -0.65
SIN3A-205	ENST00000564778	SLC26A2	P50443	739 aa		11	□□□□□ -0.65
SIN3A-205	ENST00000564778	MDM2	Q00987	491 aa	Predicted RBP	11	□□□□□ -0.65
SIN3A-205	ENST00000564778	SP4	Q02446	784 aa		11	□□□□□ -0.65
SIN3A-205	ENST00000564778	ZRSR1	Q15695	479 aa	Known RBP	11	□□□□□ -0.65
SIN3A-205	ENST00000564778	SLC9C1	Q4G0N8	1177 aa		11	□□□□□ -0.65
SIN3A-205	ENST00000564778	FAM160B1	Q5W0V3	765 aa		11	□□□□□ -0.65
SIN3A-205	ENST00000564778	CNNM4	Q6P4Q7	775 aa		11	□□□□□ -0.65
SIN3A-205	ENST00000564778	PLPPR4	Q7Z2D5	763 aa		11	□□□□□ -0.65
SIN3A-205	ENST00000564778	TPH2	Q8IWU9	490 aa		11	□□□□□ -0.65
SIN3A-205	ENST00000564778	AFG1L	Q8WV93	481 aa		11	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms