RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 SYN1P17600 705 aa18■□□□□ 0.47
RAB40C-208ENST00000564703 AFAP1L1Q8TED9 768 aa18■□□□□ 0.47
RAB40C-208ENST00000564703 TTC12Q9H892 705 aaPredicted RBP18■□□□□ 0.47
RAB40C-208ENST00000564703 NRBP2Q9NSY0 501 aa18■□□□□ 0.47
RAB40C-208ENST00000564703 TRMT13Q9NUP7 481 aaKnown RBP18■□□□□ 0.47
RAB40C-208ENST00000564703 GABBR1Q9UBS5 961 aa18■□□□□ 0.47
RAB40C-208ENST00000564703 GTF2IRD1Q9UHL9 959 aa18■□□□□ 0.47
RAB40C-208ENST00000564703 TRPC6Q9Y210 931 aa18■□□□□ 0.47
RAB40C-208ENST00000564703 IGKV6D-21A0A0A0MT36 114 aa17.99■□□□□ 0.47
RAB40C-208ENST00000564703 POTEB3A0JP26 581 aa17.99■□□□□ 0.47
RAB40C-208ENST00000564703 PPP2R5CQ13362 524 aa17.99■□□□□ 0.47
RAB40C-208ENST00000564703 POTEBQ6S5H4 581 aa17.99■□□□□ 0.47
RAB40C-208ENST00000564703 FERMT3Q86UX7 667 aa17.99■□□□□ 0.47
RAB40C-208ENST00000564703 RETREG2Q8NC44 543 aa17.99■□□□□ 0.47
RAB40C-208ENST00000564703 ATP6V0A1Q93050 837 aa17.99■□□□□ 0.47
RAB40C-208ENST00000564703 PCYT2Q99447 389 aa17.99■□□□□ 0.47
RAB40C-208ENST00000564703 PDLIM7Q9NR12 457 aa17.99■□□□□ 0.47
RAB40C-208ENST00000564703 NRCAMQ92823 1304 aa17.98■□□□□ 0.47
RAB40C-208ENST00000564703 BRCA2P51587 3418 aa17.98■□□□□ 0.47
RAB40C-208ENST00000564703 RRN3P2A6NIE6 340 aa17.98■□□□□ 0.47
RAB40C-208ENST00000564703 KIAA0355O15063 1070 aa17.98■□□□□ 0.47
RAB40C-208ENST00000564703 HBP1O60381 514 aa17.98■□□□□ 0.47
RAB40C-208ENST00000564703 DKC1O60832 514 aaKnown RBP eCLIP17.98■□□□□ 0.47
RAB40C-208ENST00000564703 OR52Z1P0C646 297 aa17.98■□□□□ 0.47
RAB40C-208ENST00000564703 TOB1P50616 345 aaPredicted RBP17.98■□□□□ 0.47
RAB40C-208ENST00000564703 BFSP2Q13515 415 aa17.98■□□□□ 0.47
RAB40C-208ENST00000564703 TMEM266Q2M3C6 531 aa17.98■□□□□ 0.47
RAB40C-208ENST00000564703 NCAPH2Q6IBW4 605 aa17.98■□□□□ 0.47
RAB40C-208ENST00000564703 GDF6Q6KF10 455 aaPredicted RBP17.98■□□□□ 0.47
RAB40C-208ENST00000564703 TRMT1LQ7Z2T5 733 aaKnown RBP17.98■□□□□ 0.47
RAB40C-208ENST00000564703 SH3RF1Q7Z6J0 888 aa17.98■□□□□ 0.47
RAB40C-208ENST00000564703 CCDC60Q8IWA6 550 aaPredicted RBP17.98■□□□□ 0.47
RAB40C-208ENST00000564703 CCDC155Q8N6L0 562 aa17.98■□□□□ 0.47
RAB40C-208ENST00000564703 MTMR9Q96QG7 549 aa17.98■□□□□ 0.47
RAB40C-208ENST00000564703 ZSCAN16Q9H4T2 348 aaPredicted RBP17.98■□□□□ 0.47
RAB40C-208ENST00000564703 SETD4Q9NVD3 440 aa17.98■□□□□ 0.47
RAB40C-208ENST00000564703 DAXXQ9UER7 740 aaPredicted RBP17.98■□□□□ 0.47
RAB40C-208ENST00000564703 PCDHB6Q9Y5E3 794 aa17.98■□□□□ 0.47
RAB40C-208ENST00000564703 MAFBQ9Y5Q3 323 aaPredicted RBP17.98■□□□□ 0.47
RAB40C-208ENST00000564703 MYH9P35579 1960 aaKnown RBP17.97■□□□□ 0.47
RAB40C-208ENST00000564703 TRIM43BA6NCK2 446 aa17.97■□□□□ 0.47
RAB40C-208ENST00000564703 LAD1O00515 517 aa17.97■□□□□ 0.47
RAB40C-208ENST00000564703 WNT7AO00755 349 aa17.97■□□□□ 0.47
RAB40C-208ENST00000564703 CYP2C9P11712 490 aa17.97■□□□□ 0.47
RAB40C-208ENST00000564703 PPFIA1Q13136 1202 aa17.97■□□□□ 0.47
RAB40C-208ENST00000564703 PTGDRQ13258 359 aa17.97■□□□□ 0.47
RAB40C-208ENST00000564703 PLCB4Q15147 1175 aa17.97■□□□□ 0.47
RAB40C-208ENST00000564703 EPHA7Q15375 998 aa17.97■□□□□ 0.47
RAB40C-208ENST00000564703 BBXQ8WY36 941 aaPredicted RBP17.97■□□□□ 0.47
RAB40C-208ENST00000564703 TRIM43Q96BQ3 446 aaPredicted RBP17.97■□□□□ 0.47
RAB40C-208ENST00000564703 FAM167AQ96KS9 214 aa17.97■□□□□ 0.47
RAB40C-208ENST00000564703 HIPK3Q9H422 1215 aa17.97■□□□□ 0.47
RAB40C-208ENST00000564703 ALPK3Q96L96 1907 aa17.97■□□□□ 0.47
RAB40C-208ENST00000564703 TIMP1P01033 207 aa17.96■□□□□ 0.47
RAB40C-208ENST00000564703 P4HBP07237 508 aaKnown RBP17.96■□□□□ 0.47
RAB40C-208ENST00000564703 INSRRP14616 1297 aa17.96■□□□□ 0.47
RAB40C-208ENST00000564703 TECP42680 631 aa17.96■□□□□ 0.47
RAB40C-208ENST00000564703 PSMC5P62195 406 aa17.96■□□□□ 0.47
RAB40C-208ENST00000564703 IGBP1P78318 339 aa17.96■□□□□ 0.47
RAB40C-208ENST00000564703 PTK7Q13308 1070 aa17.96■□□□□ 0.47
RAB40C-208ENST00000564703 NBR1Q14596 966 aa17.96■□□□□ 0.47
RAB40C-208ENST00000564703 B3GNT9Q6UX72 402 aa17.96■□□□□ 0.47
RAB40C-208ENST00000564703 ATP8B4Q8TF62 1192 aa17.96■□□□□ 0.47
RAB40C-208ENST00000564703 RAB34Q9BZG1 259 aa17.96■□□□□ 0.47
RAB40C-208ENST00000564703 TMEM60Q9H2L4 133 aa17.96■□□□□ 0.47
RAB40C-208ENST00000564703 VAV3Q9UKW4 847 aa17.96■□□□□ 0.47
RAB40C-208ENST00000564703 CEP131Q9UPN4 1083 aa17.96■□□□□ 0.47
RAB40C-208ENST00000564703 MTMR6Q9Y217 621 aa17.96■□□□□ 0.47
RAB40C-208ENST00000564703 EML1O00423 815 aa17.95■□□□□ 0.46
RAB40C-208ENST00000564703 BMP15O95972 392 aa17.95■□□□□ 0.46
RAB40C-208ENST00000564703 QARSP47897 775 aaKnown RBP17.95■□□□□ 0.46
RAB40C-208ENST00000564703 ZNF200P98182 395 aaPredicted RBP17.95■□□□□ 0.46
RAB40C-208ENST00000564703 GRIK4Q16099 956 aa17.95■□□□□ 0.46
RAB40C-208ENST00000564703 ZNF484Q5JVG2 852 aa17.95■□□□□ 0.46
RAB40C-208ENST00000564703 TMEM199Q8N511 208 aa17.95■□□□□ 0.46
RAB40C-208ENST00000564703 ERMNQ8TAM6 284 aa17.95■□□□□ 0.46
RAB40C-208ENST00000564703 PPP1R12CQ9BZL4 782 aa17.95■□□□□ 0.46
RAB40C-208ENST00000564703 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.95■□□□□ 0.46
RAB40C-208ENST00000564703 TBX21Q9UL17 535 aa17.95■□□□□ 0.46
RAB40C-208ENST00000564703 DDX11L8A8MPP1 907 aa17.94■□□□□ 0.46
RAB40C-208ENST00000564703 TREHO43280 583 aa17.94■□□□□ 0.46
RAB40C-208ENST00000564703 MDM2Q00987 491 aaPredicted RBP17.94■□□□□ 0.46
RAB40C-208ENST00000564703 PRPF38BQ5VTL8 546 aaKnown RBP17.94■□□□□ 0.46
RAB40C-208ENST00000564703 DTHD1Q6ZMT9 781 aa17.94■□□□□ 0.46
RAB40C-208ENST00000564703 RSPH3Q86UC2 560 aa17.94■□□□□ 0.46
RAB40C-208ENST00000564703 TPH2Q8IWU9 490 aa17.94■□□□□ 0.46
RAB40C-208ENST00000564703 CAGE1Q8TC20 777 aa17.94■□□□□ 0.46
RAB40C-208ENST00000564703 LMBR1Q8WVP7 490 aa17.94■□□□□ 0.46
RAB40C-208ENST00000564703 BADQ92934 168 aa17.94■□□□□ 0.46
RAB40C-208ENST00000564703 STK24Q9Y6E0 443 aa17.94■□□□□ 0.46
RAB40C-208ENST00000564703 OATP04181 439 aa17.93■□□□□ 0.46
RAB40C-208ENST00000564703 ATP4AP20648 1035 aa17.93■□□□□ 0.46
RAB40C-208ENST00000564703 CYP2C18P33260 490 aa17.93■□□□□ 0.46
RAB40C-208ENST00000564703 PRPHP41219 470 aa17.93■□□□□ 0.46
RAB40C-208ENST00000564703 PDIA5Q14554 519 aa17.93■□□□□ 0.46
RAB40C-208ENST00000564703 XKR3Q5GH77 459 aa17.93■□□□□ 0.46
RAB40C-208ENST00000564703 MFSD5Q6N075 450 aa17.93■□□□□ 0.46
RAB40C-208ENST00000564703 OTUD6AQ7L8S5 288 aa17.93■□□□□ 0.46
RAB40C-208ENST00000564703 C4orf32Q8N8J7 132 aa17.93■□□□□ 0.46
RAB40C-208ENST00000564703 BANK1Q8NDB2 785 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms