RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 C16orf59Q7L2K0 433 aa6.7□□□□□ -1.34
CHD9-212ENST00000564641 STPG3Q8N7X2 389 aa6.7□□□□□ -1.34
CHD9-212ENST00000564641 C8orf37Q96NL8 207 aa6.7□□□□□ -1.34
CHD9-212ENST00000564641 ST6GALNAC2Q9UJ37 374 aa6.7□□□□□ -1.34
CHD9-212ENST00000564641 SLC4A7Q9Y6M7 1214 aa6.7□□□□□ -1.34
CHD9-212ENST00000564641 PATE3B3GLJ2 98 aa6.69□□□□□ -1.34
CHD9-212ENST00000564641 ACOT7O00154 380 aa6.69□□□□□ -1.34
CHD9-212ENST00000564641 ARVCFO00192 962 aa6.69□□□□□ -1.34
CHD9-212ENST00000564641 GPR42O15529 346 aa6.69□□□□□ -1.34
CHD9-212ENST00000564641 PTPN1P18031 435 aaKnown RBP6.69□□□□□ -1.34
CHD9-212ENST00000564641 GUCY1A3Q02108 690 aa6.69□□□□□ -1.34
CHD9-212ENST00000564641 CRY1Q16526 586 aa6.69□□□□□ -1.34
CHD9-212ENST00000564641 ZNF568Q3ZCX4 644 aa6.69□□□□□ -1.34
CHD9-212ENST00000564641 ARHGAP36Q6ZRI8 547 aa6.69□□□□□ -1.34
CHD9-212ENST00000564641 DHRS4Q9BTZ2 278 aa6.69□□□□□ -1.34
CHD9-212ENST00000564641 KLC2Q9H0B6 622 aa6.69□□□□□ -1.34
CHD9-212ENST00000564641 DEF6Q9H4E7 631 aa6.69□□□□□ -1.34
CHD9-212ENST00000564641 CD248Q9HCU0 757 aa6.69□□□□□ -1.34
CHD9-212ENST00000564641 CATSPERZQ9NTU4 200 aa6.69□□□□□ -1.34
CHD9-212ENST00000564641 PFDN2Q9UHV9 154 aa6.69□□□□□ -1.34
CHD9-212ENST00000564641 TCAF1Q9Y4C2 921 aa6.69□□□□□ -1.34
CHD9-212ENST00000564641 ATP23Q9Y6H3 246 aa6.69□□□□□ -1.34
CHD9-212ENST00000564641 MATN3O15232 486 aa6.68□□□□□ -1.34
CHD9-212ENST00000564641 POLD1P28340 1107 aa6.68□□□□□ -1.34
CHD9-212ENST00000564641 USP10Q14694 798 aaKnown RBP6.68□□□□□ -1.34
CHD9-212ENST00000564641 PCDH19Q8TAB3 1148 aa6.68□□□□□ -1.34
CHD9-212ENST00000564641 SH3RF2Q8TEC5 729 aa6.68□□□□□ -1.34
CHD9-212ENST00000564641 CARD11Q9BXL7 1154 aa6.68□□□□□ -1.34
CHD9-212ENST00000564641 CD244Q9BZW8 370 aa6.68□□□□□ -1.34
CHD9-212ENST00000564641 ARHGAP28Q9P2N2 729 aa6.68□□□□□ -1.34
CHD9-212ENST00000564641 CCDC85CA6NKD9 419 aa6.67□□□□□ -1.34
CHD9-212ENST00000564641 EFCAB14O75071 495 aa6.67□□□□□ -1.34
CHD9-212ENST00000564641 C6orf222P0C671 652 aaPredicted RBP6.67□□□□□ -1.34
CHD9-212ENST00000564641 CSF2RBP32927 897 aa6.67□□□□□ -1.34
CHD9-212ENST00000564641 SELENOPP49908 381 aa6.67□□□□□ -1.34
CHD9-212ENST00000564641 ZXDAP98168 799 aa6.67□□□□□ -1.34
CHD9-212ENST00000564641 ICAM4Q14773 271 aa6.67□□□□□ -1.34
CHD9-212ENST00000564641 HS1BP3Q53T59 392 aa6.67□□□□□ -1.34
CHD9-212ENST00000564641 FAM209AQ5JX71 171 aa6.67□□□□□ -1.34
CHD9-212ENST00000564641 PHF19Q5T6S3 580 aa6.67□□□□□ -1.34
CHD9-212ENST00000564641 SOGA3Q5TF21 947 aa6.67□□□□□ -1.34
CHD9-212ENST00000564641 CXXC5Q7LFL8 322 aaKnown RBP6.67□□□□□ -1.34
CHD9-212ENST00000564641 TACO1Q9BSH4 297 aaKnown RBP6.67□□□□□ -1.34
CHD9-212ENST00000564641 MEGF9Q9H1U4 602 aa6.67□□□□□ -1.34
CHD9-212ENST00000564641 RIC8BQ9NVN3 520 aa6.67□□□□□ -1.34
CHD9-212ENST00000564641 FBXO10Q9UK96 956 aa6.67□□□□□ -1.34
CHD9-212ENST00000564641 PCDHA8Q9Y5H6 950 aa6.67□□□□□ -1.34
CHD9-212ENST00000564641 TCRBV5S4A2TA0A5A2 114 aa6.66□□□□□ -1.34
CHD9-212ENST00000564641 CNOT4O95628 575 aaKnown RBP6.66□□□□□ -1.34
CHD9-212ENST00000564641 IL18BPO95998 194 aa6.66□□□□□ -1.34
CHD9-212ENST00000564641 PDE6AP16499 860 aa6.66□□□□□ -1.34
CHD9-212ENST00000564641 HERVK_113P62684 666 aa6.66□□□□□ -1.34
CHD9-212ENST00000564641 LMF1Q96S06 567 aa6.66□□□□□ -1.34
CHD9-212ENST00000564641 MRPS23Q9Y3D9 190 aaKnown RBP6.66□□□□□ -1.34
CHD9-212ENST00000564641 CCDC163A0A0D9SF12 145 aa6.65□□□□□ -1.34
CHD9-212ENST00000564641 CLASP2O75122 1294 aaKnown RBP6.65□□□□□ -1.34
CHD9-212ENST00000564641 ZNF623O75123 536 aa6.65□□□□□ -1.34
CHD9-212ENST00000564641 PYGMP11217 842 aa6.65□□□□□ -1.34
CHD9-212ENST00000564641 GTF2F1P35269 517 aaKnown RBP eCLIP6.65□□□□□ -1.34
CHD9-212ENST00000564641 RBL2Q08999 1139 aa6.65□□□□□ -1.34
CHD9-212ENST00000564641 ZMAT1Q5H9K5 638 aa6.65□□□□□ -1.34
CHD9-212ENST00000564641 OSTM1Q86WC4 334 aa6.65□□□□□ -1.34
CHD9-212ENST00000564641 ZC3H7AQ8IWR0 971 aaKnown RBP6.65□□□□□ -1.34
CHD9-212ENST00000564641 SH3RF3Q8TEJ3 882 aaPredicted RBP6.65□□□□□ -1.34
CHD9-212ENST00000564641 SCYL1Q96KG9 808 aa6.65□□□□□ -1.34
CHD9-212ENST00000564641 MSL2Q9HCI7 577 aa6.65□□□□□ -1.34
CHD9-212ENST00000564641 SLC39A2Q9NP94 309 aa6.65□□□□□ -1.34
CHD9-212ENST00000564641 TESMINQ9Y4I5 508 aa6.65□□□□□ -1.34
CHD9-212ENST00000564641 KDM2BQ8NHM5 1336 aa6.65□□□□□ -1.35
CHD9-212ENST00000564641 FAM90A27PA6NNH2 459 aa6.64□□□□□ -1.35
CHD9-212ENST00000564641 MAN2B1O00754 1011 aa6.64□□□□□ -1.35
CHD9-212ENST00000564641 DIAPH1O60610 1272 aaKnown RBP6.64□□□□□ -1.35
CHD9-212ENST00000564641 FAM153BP0C7A2 387 aa6.64□□□□□ -1.35
CHD9-212ENST00000564641 PTGS1P23219 599 aa6.64□□□□□ -1.35
CHD9-212ENST00000564641 LACTBP83111 547 aaPredicted RBP6.64□□□□□ -1.35
CHD9-212ENST00000564641 TOP3AQ13472 1001 aaPredicted RBP6.64□□□□□ -1.35
CHD9-212ENST00000564641 SERINC3Q13530 473 aa6.64□□□□□ -1.35
CHD9-212ENST00000564641 FOXB2Q5VYV0 432 aa6.64□□□□□ -1.35
CHD9-212ENST00000564641 PTRH1Q86Y79 214 aaKnown RBP6.64□□□□□ -1.35
CHD9-212ENST00000564641 EXOC2Q96KP1 924 aa6.64□□□□□ -1.35
CHD9-212ENST00000564641 GALNT8Q9NY28 637 aa6.64□□□□□ -1.35
CHD9-212ENST00000564641 ESYT3A0FGR9 886 aa6.63□□□□□ -1.35
CHD9-212ENST00000564641 CCDC66A2RUB6 948 aa6.63□□□□□ -1.35
CHD9-212ENST00000564641 ZNF561-AS1K7EIQ3 104 aa6.63□□□□□ -1.35
CHD9-212ENST00000564641 MUSKO15146 869 aa6.63□□□□□ -1.35
CHD9-212ENST00000564641 CRTAMO95727 393 aa6.63□□□□□ -1.35
CHD9-212ENST00000564641 AMY2AP04746 511 aa6.63□□□□□ -1.35
CHD9-212ENST00000564641 KRT15P19012 456 aa6.63□□□□□ -1.35
CHD9-212ENST00000564641 AMY2BP19961 511 aa6.63□□□□□ -1.35
CHD9-212ENST00000564641 ETV4P43268 484 aa6.63□□□□□ -1.35
CHD9-212ENST00000564641 RAC3P60763 192 aa6.63□□□□□ -1.35
CHD9-212ENST00000564641 ZNF585AQ6P3V2 769 aa6.63□□□□□ -1.35
CHD9-212ENST00000564641 WDR48Q8TAF3 677 aa6.63□□□□□ -1.35
CHD9-212ENST00000564641 DEPDC7Q96QD5 511 aa6.63□□□□□ -1.35
CHD9-212ENST00000564641 PTPN18Q99952 460 aa6.63□□□□□ -1.35
CHD9-212ENST00000564641 INCENPQ9NQS7 918 aa6.63□□□□□ -1.35
CHD9-212ENST00000564641 SRRDQ9UH36 339 aa6.63□□□□□ -1.35
CHD9-212ENST00000564641 CBLCQ9ULV8 474 aa6.63□□□□□ -1.35
CHD9-212ENST00000564641 PCDHA9Q9Y5H5 950 aa6.63□□□□□ -1.35
CHD9-212ENST00000564641 SRGAP2CP0DJJ0 459 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms