RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 SPATA4Q8NEY3 305 aa22.01■■□□□ 1.11
MSLN-205ENST00000563941 TDRD3Q9H7E2 651 aaKnown RBP22.01■■□□□ 1.11
MSLN-205ENST00000563941 TRAF3IP3Q9Y228 551 aa22.01■■□□□ 1.11
MSLN-205ENST00000563941 MSH4O15457 936 aa22.01■■□□□ 1.11
MSLN-205ENST00000563941 GH2P01242 217 aa22.01■■□□□ 1.11
MSLN-205ENST00000563941 AARSP49588 968 aaKnown RBP eCLIP22.01■■□□□ 1.11
MSLN-205ENST00000563941 HNRNPH2P55795 449 aaKnown RBP22.01■■□□□ 1.11
MSLN-205ENST00000563941 KLHDC7AQ5VTJ3 777 aa22.01■■□□□ 1.11
MSLN-205ENST00000563941 ZNF772Q68DY9 489 aaPredicted RBP22.01■■□□□ 1.11
MSLN-205ENST00000563941 TLR10Q9BXR5 811 aa22.01■■□□□ 1.11
MSLN-205ENST00000563941 LUC7LQ9NQ29 371 aaKnown RBP22.01■■□□□ 1.11
MSLN-205ENST00000563941 ZNF219Q9P2Y4 722 aaPredicted RBP22.01■■□□□ 1.11
MSLN-205ENST00000563941 STK24Q9Y6E0 443 aa22.01■■□□□ 1.11
MSLN-205ENST00000563941 SLX4Q8IY92 1834 aa22.01■■□□□ 1.11
MSLN-205ENST00000563941 OPLAHO14841 1288 aa22■■□□□ 1.11
MSLN-205ENST00000563941 HOXA13P31271 388 aaPredicted RBP22■■□□□ 1.11
MSLN-205ENST00000563941 CIITAP33076 1130 aa22■■□□□ 1.11
MSLN-205ENST00000563941 NAP1L1P55209 391 aaKnown RBP22■■□□□ 1.11
MSLN-205ENST00000563941 KNOP1Q1ED39 458 aaKnown RBP22■■□□□ 1.11
MSLN-205ENST00000563941 RBM26Q5T8P6 1007 aaKnown RBP22■■□□□ 1.11
MSLN-205ENST00000563941 CCDC181Q5TID7 509 aa22■■□□□ 1.11
MSLN-205ENST00000563941 EPM2AIP1Q7L775 607 aaPredicted RBP22■■□□□ 1.11
MSLN-205ENST00000563941 HDAC9Q9UKV0 1011 aa22■■□□□ 1.11
MSLN-205ENST00000563941 VAV3Q9UKW4 847 aa22■■□□□ 1.11
MSLN-205ENST00000563941 ATRNL1Q5VV63 1379 aa22■■□□□ 1.11
MSLN-205ENST00000563941 PHACTR2O75167 634 aa22■■□□□ 1.11
MSLN-205ENST00000563941 SLC18A3Q16572 532 aa22■■□□□ 1.11
MSLN-205ENST00000563941 TBC1D5Q92609 795 aa22■■□□□ 1.11
MSLN-205ENST00000563941 GDAP1L1Q96MZ0 367 aa22■■□□□ 1.11
MSLN-205ENST00000563941 LRRC1Q9BTT6 524 aa22■■□□□ 1.11
MSLN-205ENST00000563941 SELENOOQ9BVL4 669 aa22■■□□□ 1.11
MSLN-205ENST00000563941 SMARCAL1Q9NZC9 954 aa22■■□□□ 1.11
MSLN-205ENST00000563941 AIPL1Q9NZN9 384 aa22■■□□□ 1.11
MSLN-205ENST00000563941 HOXD13P35453 343 aa21.99■■□□□ 1.11
MSLN-205ENST00000563941 CYP4A11Q02928 519 aa21.99■■□□□ 1.11
MSLN-205ENST00000563941 ARID5AQ03989 594 aa21.99■■□□□ 1.11
MSLN-205ENST00000563941 KLHL30Q0D2K2 578 aa21.99■■□□□ 1.11
MSLN-205ENST00000563941 EZH2Q15910 746 aaKnown RBP21.99■■□□□ 1.11
MSLN-205ENST00000563941 ASIC2Q16515 512 aa21.99■■□□□ 1.11
MSLN-205ENST00000563941 BTNL9Q6UXG8 535 aa21.99■■□□□ 1.11
MSLN-205ENST00000563941 FRMD5Q7Z6J6 570 aa21.99■■□□□ 1.11
MSLN-205ENST00000563941 FAM133AQ8N9E0 248 aa21.99■■□□□ 1.11
MSLN-205ENST00000563941 EHD2Q9NZN4 543 aa21.99■■□□□ 1.11
MSLN-205ENST00000563941 KIF13BQ9NQT8 1826 aa21.99■■□□□ 1.11
MSLN-205ENST00000563941 ENTPD3O75355 529 aa21.98■■□□□ 1.11
MSLN-205ENST00000563941 MYBP10242 640 aa21.98■■□□□ 1.11
MSLN-205ENST00000563941 RRP1BQ14684 758 aaKnown RBP21.98■■□□□ 1.11
MSLN-205ENST00000563941 CYP2W1Q8TAV3 490 aa21.98■■□□□ 1.11
MSLN-205ENST00000563941 HDAC7Q8WUI4 952 aa21.98■■□□□ 1.11
MSLN-205ENST00000563941 RUBCNQ92622 972 aa21.98■■□□□ 1.11
MSLN-205ENST00000563941 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.98■■□□□ 1.11
MSLN-205ENST00000563941 ARMCX3Q9UH62 379 aaPredicted RBP21.98■■□□□ 1.11
MSLN-205ENST00000563941 TSKSQ9UJT2 592 aa21.98■■□□□ 1.11
MSLN-205ENST00000563941 ZC3H4Q9UPT8 1303 aaKnown RBP21.98■■□□□ 1.11
MSLN-205ENST00000563941 A0A1W2PRG0 241 aa21.98■■□□□ 1.11
MSLN-205ENST00000563941 PRPF6O94906 941 aaKnown RBP21.98■■□□□ 1.11
MSLN-205ENST00000563941 APBA3O96018 575 aa21.98■■□□□ 1.11
MSLN-205ENST00000563941 PAFAH1B1P43034 410 aa21.98■■□□□ 1.11
MSLN-205ENST00000563941 MATR3P43243 847 aaKnown RBP eCLIP21.98■■□□□ 1.11
MSLN-205ENST00000563941 NAB2Q15742 525 aa21.98■■□□□ 1.11
MSLN-205ENST00000563941 FLAD1Q8NFF5 587 aa21.98■■□□□ 1.11
MSLN-205ENST00000563941 PRR12Q9ULL5 1215 aa21.98■■□□□ 1.11
MSLN-205ENST00000563941 A0A087X0T9 212 aa21.97■■□□□ 1.11
MSLN-205ENST00000563941 A0A0U1RQG5 324 aaPredicted RBP21.97■■□□□ 1.11
MSLN-205ENST00000563941 RSPH10B2B2RC85 870 aa21.97■■□□□ 1.11
MSLN-205ENST00000563941 PDXKO00764 312 aa21.97■■□□□ 1.11
MSLN-205ENST00000563941 CALUO43852 315 aaPredicted RBP21.97■■□□□ 1.11
MSLN-205ENST00000563941 SYF2O95926 243 aaKnown RBP21.97■■□□□ 1.11
MSLN-205ENST00000563941 FAM228BP0C875 321 aa21.97■■□□□ 1.11
MSLN-205ENST00000563941 RSPH10BP0C881 870 aa21.97■■□□□ 1.11
MSLN-205ENST00000563941 ZNF76P36508 570 aa21.97■■□□□ 1.11
MSLN-205ENST00000563941 AOC3Q16853 763 aa21.97■■□□□ 1.11
MSLN-205ENST00000563941 STYK1Q6J9G0 422 aa21.97■■□□□ 1.11
MSLN-205ENST00000563941 SPICE1Q8N0Z3 855 aa21.97■■□□□ 1.11
MSLN-205ENST00000563941 AENQ8WTP8 325 aaKnown RBP21.97■■□□□ 1.11
MSLN-205ENST00000563941 EIF2AK1Q9BQI3 630 aaKnown RBP21.97■■□□□ 1.11
MSLN-205ENST00000563941 POLR3CQ9BUI4 534 aaPredicted RBP21.97■■□□□ 1.11
MSLN-205ENST00000563941 BHMT2Q9H2M3 363 aa21.97■■□□□ 1.11
MSLN-205ENST00000563941 H0YIN7 160 aa21.97■■□□□ 1.11
MSLN-205ENST00000563941 AFPP02771 609 aaKnown RBP21.97■■□□□ 1.11
MSLN-205ENST00000563941 CYP3A4P08684 503 aa21.97■■□□□ 1.11
MSLN-205ENST00000563941 ACTN1P12814 892 aa21.97■■□□□ 1.11
MSLN-205ENST00000563941 KLRC1P26715 233 aa21.97■■□□□ 1.11
MSLN-205ENST00000563941 ENOX2Q16206 610 aaKnown RBP21.97■■□□□ 1.11
MSLN-205ENST00000563941 CSRNP1Q96S65 589 aa21.97■■□□□ 1.11
MSLN-205ENST00000563941 HINFPQ9BQA5 517 aa21.97■■□□□ 1.11
MSLN-205ENST00000563941 RUSC1Q9BVN2 902 aa21.97■■□□□ 1.11
MSLN-205ENST00000563941 DMGDHQ9UI17 866 aaKnown RBP21.97■■□□□ 1.11
MSLN-205ENST00000563941 SMCHD1A6NHR9 2005 aa21.96■■□□□ 1.11
MSLN-205ENST00000563941 PIK3CDO00329 1044 aa21.96■■□□□ 1.11
MSLN-205ENST00000563941 EML1O00423 815 aa21.96■■□□□ 1.11
MSLN-205ENST00000563941 RNF40O75150 1001 aa21.96■■□□□ 1.11
MSLN-205ENST00000563941 PALMO75781 387 aa21.96■■□□□ 1.11
MSLN-205ENST00000563941 SLC9A1P19634 815 aa21.96■■□□□ 1.11
MSLN-205ENST00000563941 ADAMTS1Q9UHI8 967 aa21.96■■□□□ 1.11
MSLN-205ENST00000563941 RABGAP1Q9Y3P9 1069 aa21.96■■□□□ 1.11
MSLN-205ENST00000563941 TBCAO75347 108 aaKnown RBP21.95■■□□□ 1.11
MSLN-205ENST00000563941 EYA4O95677 639 aa21.95■■□□□ 1.11
MSLN-205ENST00000563941 BMT2Q1RMZ1 405 aa21.95■■□□□ 1.11
MSLN-205ENST00000563941 DPY19L2P1Q6NXN4 242 aa21.95■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms