RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 SCLYQ96I15 445 aa21.16■□□□□ 0.98
CDH11-206ENST00000562998 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.16■□□□□ 0.98
CDH11-206ENST00000562998 BRMS1Q9HCU9 246 aa21.16■□□□□ 0.98
CDH11-206ENST00000562998 SCN5AQ14524 2016 aa21.16■□□□□ 0.98
CDH11-206ENST00000562998 TREHO43280 583 aa21.15■□□□□ 0.98
CDH11-206ENST00000562998 CKBP12277 381 aa21.15■□□□□ 0.98
CDH11-206ENST00000562998 GCFC2P16383 781 aaKnown RBP21.15■□□□□ 0.98
CDH11-206ENST00000562998 SLC26A2P50443 739 aa21.15■□□□□ 0.98
CDH11-206ENST00000562998 TRIM29Q14134 588 aa21.15■□□□□ 0.98
CDH11-206ENST00000562998 LETM2Q2VYF4 491 aa21.15■□□□□ 0.98
CDH11-206ENST00000562998 CCDC60Q8IWA6 550 aaPredicted RBP21.15■□□□□ 0.98
CDH11-206ENST00000562998 ATP6V0A1Q93050 837 aa21.15■□□□□ 0.98
CDH11-206ENST00000562998 AZI2Q9H6S1 392 aa21.15■□□□□ 0.98
CDH11-206ENST00000562998 KCNMB3Q9NPA1 279 aa21.15■□□□□ 0.98
CDH11-206ENST00000562998 DDX25Q9UHL0 483 aaKnown RBP21.15■□□□□ 0.98
CDH11-206ENST00000562998 WDR81Q562E7 1941 aa21.14■□□□□ 0.98
CDH11-206ENST00000562998 MBLAC1A4D2B0 266 aaPredicted RBP21.14■□□□□ 0.97
CDH11-206ENST00000562998 GNAT1P11488 350 aa21.14■□□□□ 0.97
CDH11-206ENST00000562998 ATP4AP20648 1035 aa21.14■□□□□ 0.97
CDH11-206ENST00000562998 MARK3P27448 753 aa21.14■□□□□ 0.97
CDH11-206ENST00000562998 RFC2P35250 354 aa21.14■□□□□ 0.97
CDH11-206ENST00000562998 PLCB4Q15147 1175 aa21.14■□□□□ 0.97
CDH11-206ENST00000562998 MARCH8Q5T0T0 291 aa21.14■□□□□ 0.97
CDH11-206ENST00000562998 MIS18BP1Q6P0N0 1132 aa21.14■□□□□ 0.97
CDH11-206ENST00000562998 CCDC155Q8N6L0 562 aa21.14■□□□□ 0.97
CDH11-206ENST00000562998 GJA10Q969M2 543 aa21.14■□□□□ 0.97
CDH11-206ENST00000562998 C8orf76Q96K31 380 aa21.14■□□□□ 0.97
CDH11-206ENST00000562998 PCDHA10Q9Y5I2 948 aa21.14■□□□□ 0.97
CDH11-206ENST00000562998 MAFBQ9Y5Q3 323 aaPredicted RBP21.14■□□□□ 0.97
CDH11-206ENST00000562998 KAT6AQ92794 2004 aa21.13■□□□□ 0.97
CDH11-206ENST00000562998 ACRP10323 421 aa21.13■□□□□ 0.97
CDH11-206ENST00000562998 SELPP16109 830 aa21.13■□□□□ 0.97
CDH11-206ENST00000562998 FOSBP53539 338 aa21.13■□□□□ 0.97
CDH11-206ENST00000562998 LRCH2Q5VUJ6 765 aa21.13■□□□□ 0.97
CDH11-206ENST00000562998 PSRC1Q6PGN9 363 aaPredicted RBP21.13■□□□□ 0.97
CDH11-206ENST00000562998 ZNF365Q70YC5 407 aa21.13■□□□□ 0.97
CDH11-206ENST00000562998 RPAINQ86UA6 219 aa21.13■□□□□ 0.97
CDH11-206ENST00000562998 RETREG2Q8NC44 543 aa21.13■□□□□ 0.97
CDH11-206ENST00000562998 NAP1L4Q99733 375 aaKnown RBP21.13■□□□□ 0.97
CDH11-206ENST00000562998 TBX3O15119 743 aa21.12■□□□□ 0.97
CDH11-206ENST00000562998 GAS7O60861 476 aa21.12■□□□□ 0.97
CDH11-206ENST00000562998 PFKMP08237 780 aa21.12■□□□□ 0.97
CDH11-206ENST00000562998 INSRRP14616 1297 aa21.12■□□□□ 0.97
CDH11-206ENST00000562998 GUCY1B3Q02153 619 aa21.12■□□□□ 0.97
CDH11-206ENST00000562998 PPFIA1Q13136 1202 aa21.12■□□□□ 0.97
CDH11-206ENST00000562998 GRIK4Q16099 956 aa21.12■□□□□ 0.97
CDH11-206ENST00000562998 SWSAP1Q6NVH7 229 aa21.12■□□□□ 0.97
CDH11-206ENST00000562998 LRRC8DQ7L1W4 858 aa21.12■□□□□ 0.97
CDH11-206ENST00000562998 RPUSD2Q8IZ73 545 aaKnown RBP21.12■□□□□ 0.97
CDH11-206ENST00000562998 TET1Q8NFU7 2136 aa21.12■□□□□ 0.97
CDH11-206ENST00000562998 HERVK_113Q902F9 699 aa21.12■□□□□ 0.97
CDH11-206ENST00000562998 HAS1Q92839 578 aa21.12■□□□□ 0.97
CDH11-206ENST00000562998 FAM20AQ96MK3 541 aa21.12■□□□□ 0.97
CDH11-206ENST00000562998 TEKT3Q9BXF9 490 aa21.12■□□□□ 0.97
CDH11-206ENST00000562998 UNC45AQ9H3U1 944 aa21.12■□□□□ 0.97
CDH11-206ENST00000562998 ZNF302Q9NR11 478 aa21.12■□□□□ 0.97
CDH11-206ENST00000562998 IGSF9BQ9UPX0 1349 aa21.11■□□□□ 0.97
CDH11-206ENST00000562998 WDR64B1ANS9 1081 aa21.11■□□□□ 0.97
CDH11-206ENST00000562998 WNT7AO00755 349 aa21.11■□□□□ 0.97
CDH11-206ENST00000562998 CCNT1O60563 726 aaKnown RBP21.11■□□□□ 0.97
CDH11-206ENST00000562998 CAND2O75155 1236 aa21.11■□□□□ 0.97
CDH11-206ENST00000562998 PARNO95453 639 aaKnown RBP21.11■□□□□ 0.97
CDH11-206ENST00000562998 PSAPP07602 524 aa21.11■□□□□ 0.97
CDH11-206ENST00000562998 SFNP31947 248 aa21.11■□□□□ 0.97
CDH11-206ENST00000562998 MBTPS1Q14703 1052 aa21.11■□□□□ 0.97
CDH11-206ENST00000562998 ZNF618Q5T7W0 954 aa21.11■□□□□ 0.97
CDH11-206ENST00000562998 FAM160B1Q5W0V3 765 aa21.11■□□□□ 0.97
CDH11-206ENST00000562998 RDM1Q8NG50 284 aa21.11■□□□□ 0.97
CDH11-206ENST00000562998 FOXP1Q9H334 677 aaPredicted RBP21.11■□□□□ 0.97
CDH11-206ENST00000562998 DISC1Q9NRI5 854 aa21.11■□□□□ 0.97
CDH11-206ENST00000562998 MYH9P35579 1960 aaKnown RBP21.1■□□□□ 0.97
CDH11-206ENST00000562998 POTEB3A0JP26 581 aa21.1■□□□□ 0.97
CDH11-206ENST00000562998 RRN3P2A6NIE6 340 aa21.1■□□□□ 0.97
CDH11-206ENST00000562998 ZBTB42B2RXF5 422 aa21.1■□□□□ 0.97
CDH11-206ENST00000562998 FGBP02675 491 aa21.1■□□□□ 0.97
CDH11-206ENST00000562998 CXCL10P02778 98 aa21.1■□□□□ 0.97
CDH11-206ENST00000562998 CUL4AQ13619 759 aa21.1■□□□□ 0.97
CDH11-206ENST00000562998 GPR153Q6NV75 609 aa21.1■□□□□ 0.97
CDH11-206ENST00000562998 PDXDC2PQ6P474 469 aa21.1■□□□□ 0.97
CDH11-206ENST00000562998 POTEBQ6S5H4 581 aa21.1■□□□□ 0.97
CDH11-206ENST00000562998 FAM184AQ8NB25 1140 aa21.1■□□□□ 0.97
CDH11-206ENST00000562998 ATP8B4Q8TF62 1192 aa21.1■□□□□ 0.97
CDH11-206ENST00000562998 TNPO1Q92973 898 aaKnown RBP21.1■□□□□ 0.97
CDH11-206ENST00000562998 LRCH3Q96II8 777 aa21.1■□□□□ 0.97
CDH11-206ENST00000562998 RNPC3Q96LT9 517 aaKnown RBP21.1■□□□□ 0.97
CDH11-206ENST00000562998 VAV3Q9UKW4 847 aa21.1■□□□□ 0.97
CDH11-206ENST00000562998 BACH1O14867 736 aa21.09■□□□□ 0.97
CDH11-206ENST00000562998 HBP1O60381 514 aa21.09■□□□□ 0.97
CDH11-206ENST00000562998 NBNO60934 754 aa21.09■□□□□ 0.97
CDH11-206ENST00000562998 U2AF2P26368 475 aaKnown RBP eCLIP21.09■□□□□ 0.97
CDH11-206ENST00000562998 JAK3P52333 1124 aa21.09■□□□□ 0.97
CDH11-206ENST00000562998 PPP2R5CQ13362 524 aa21.09■□□□□ 0.97
CDH11-206ENST00000562998 SAFBQ15424 915 aaKnown RBP eCLIP21.09■□□□□ 0.97
CDH11-206ENST00000562998 FAM26DQ5JW98 314 aa21.09■□□□□ 0.97
CDH11-206ENST00000562998 TAF2Q6P1X5 1199 aa21.09■□□□□ 0.97
CDH11-206ENST00000562998 RUFY4Q6ZNE9 571 aa21.09■□□□□ 0.97
CDH11-206ENST00000562998 POTEDQ86YR6 584 aa21.09■□□□□ 0.97
CDH11-206ENST00000562998 TCEAL9Q9UHQ7 104 aa21.09■□□□□ 0.97
CDH11-206ENST00000562998 TUBE1Q9UJT0 475 aa21.09■□□□□ 0.97
CDH11-206ENST00000562998 ZNF862O60290 1169 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms