RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 TMCO2Q7Z6W1 182 aaPredicted RBP18.83■□□□□ 0.6
CDT1-202ENST00000562747 SESTD1Q86VW0 696 aa18.83■□□□□ 0.6
CDT1-202ENST00000562747 ARNTL2Q8WYA1 636 aa18.83■□□□□ 0.6
CDT1-202ENST00000562747 LLPHQ9BRT6 129 aaKnown RBP18.83■□□□□ 0.6
CDT1-202ENST00000562747 FTOQ9C0B1 505 aaKnown RBP eCLIP18.83■□□□□ 0.6
CDT1-202ENST00000562747 TSPYL2Q9H2G4 693 aaPredicted RBP18.83■□□□□ 0.6
CDT1-202ENST00000562747 FAM86B1E9PN63 330 aa18.82■□□□□ 0.6
CDT1-202ENST00000562747 LGALS2P05162 132 aa18.82■□□□□ 0.6
CDT1-202ENST00000562747 FAM86B2P0C5J1 330 aa18.82■□□□□ 0.6
CDT1-202ENST00000562747 ZNF286BP0CG31 522 aa18.82■□□□□ 0.6
CDT1-202ENST00000562747 ARP10275 920 aa18.82■□□□□ 0.6
CDT1-202ENST00000562747 PSEN2P49810 448 aa18.82■□□□□ 0.6
CDT1-202ENST00000562747 USP11P51784 963 aa18.82■□□□□ 0.6
CDT1-202ENST00000562747 SETQ01105 290 aaPredicted RBP18.82■□□□□ 0.6
CDT1-202ENST00000562747 MFSD10Q14728 455 aa18.82■□□□□ 0.6
CDT1-202ENST00000562747 TCTN1Q2MV58 587 aa18.82■□□□□ 0.6
CDT1-202ENST00000562747 GDF6Q6KF10 455 aaPredicted RBP18.82■□□□□ 0.6
CDT1-202ENST00000562747 PLA2G4DQ86XP0 818 aa18.82■□□□□ 0.6
CDT1-202ENST00000562747 CCDC83Q8IWF9 413 aa18.82■□□□□ 0.6
CDT1-202ENST00000562747 RETREG2Q8NC44 543 aa18.82■□□□□ 0.6
CDT1-202ENST00000562747 PHOSPHO2Q8TCD6 241 aa18.82■□□□□ 0.6
CDT1-202ENST00000562747 DHX38Q92620 1227 aaKnown RBP18.82■□□□□ 0.6
CDT1-202ENST00000562747 C16orf70Q9BSU1 422 aa18.82■□□□□ 0.6
CDT1-202ENST00000562747 AGO4Q9HCK5 861 aaKnown RBP18.82■□□□□ 0.6
CDT1-202ENST00000562747 KCNJ14Q9UNX9 436 aa18.82■□□□□ 0.6
CDT1-202ENST00000562747 IGLV3-22A0A075B6J6 115 aa18.81■□□□□ 0.6
CDT1-202ENST00000562747 LCHNA4D1U4 455 aa18.81■□□□□ 0.6
CDT1-202ENST00000562747 JAK2O60674 1132 aa18.81■□□□□ 0.6
CDT1-202ENST00000562747 BFSP2Q13515 415 aa18.81■□□□□ 0.6
CDT1-202ENST00000562747 PTGISQ16647 500 aa18.81■□□□□ 0.6
CDT1-202ENST00000562747 KIAA0753Q2KHM9 967 aa18.81■□□□□ 0.6
CDT1-202ENST00000562747 KRT25Q7Z3Z0 450 aa18.81■□□□□ 0.6
CDT1-202ENST00000562747 SDF4Q9BRK5 362 aa18.81■□□□□ 0.6
CDT1-202ENST00000562747 JPH1Q9HDC5 661 aaPredicted RBP18.81■□□□□ 0.6
CDT1-202ENST00000562747 PKD2L1Q9P0L9 805 aa18.81■□□□□ 0.6
CDT1-202ENST00000562747 H3BRB1 525 aa18.8■□□□□ 0.6
CDT1-202ENST00000562747 GTPBP6O43824 516 aaPredicted RBP18.8■□□□□ 0.6
CDT1-202ENST00000562747 LPXNO60711 386 aa18.8■□□□□ 0.6
CDT1-202ENST00000562747 DTNBO60941 627 aa18.8■□□□□ 0.6
CDT1-202ENST00000562747 WDR5P61964 334 aaKnown RBP18.8■□□□□ 0.6
CDT1-202ENST00000562747 SP4Q02446 784 aa18.8■□□□□ 0.6
CDT1-202ENST00000562747 GRB10Q13322 594 aa18.8■□□□□ 0.6
CDT1-202ENST00000562747 C7orf31Q8N865 590 aa18.8■□□□□ 0.6
CDT1-202ENST00000562747 TBCKQ8TEA7 893 aa18.8■□□□□ 0.6
CDT1-202ENST00000562747 SEPT1Q8WYJ6 367 aa18.8■□□□□ 0.6
CDT1-202ENST00000562747 TUT1Q9H6E5 874 aaKnown RBP18.8■□□□□ 0.6
CDT1-202ENST00000562747 SLC9A2Q9UBY0 812 aa18.8■□□□□ 0.6
CDT1-202ENST00000562747 GTF2IRD1Q9UHL9 959 aa18.8■□□□□ 0.6
CDT1-202ENST00000562747 NOD1Q9Y239 953 aa18.8■□□□□ 0.6
CDT1-202ENST00000562747 BAIAP3O94812 1187 aa18.79■□□□□ 0.6
CDT1-202ENST00000562747 TCF7P36402 384 aaPredicted RBP18.79■□□□□ 0.6
CDT1-202ENST00000562747 DEFB103AP81534 67 aa18.79■□□□□ 0.6
CDT1-202ENST00000562747 HMGN5P82970 282 aaKnown RBP18.79■□□□□ 0.6
CDT1-202ENST00000562747 NONOQ15233 471 aaKnown RBP eCLIP18.79■□□□□ 0.6
CDT1-202ENST00000562747 AFAP1L1Q8TED9 768 aa18.79■□□□□ 0.6
CDT1-202ENST00000562747 BRMS1Q9HCU9 246 aa18.79■□□□□ 0.6
CDT1-202ENST00000562747 GJB4Q9NTQ9 266 aa18.79■□□□□ 0.6
CDT1-202ENST00000562747 HDAC6Q9UBN7 1215 aa18.79■□□□□ 0.6
CDT1-202ENST00000562747 ZNF215Q9UL58 517 aaPredicted RBP18.79■□□□□ 0.6
CDT1-202ENST00000562747 GSTTP1A0A1W2PQM5 241 aa18.78■□□□□ 0.6
CDT1-202ENST00000562747 IPO5O00410 1097 aaKnown RBP18.78■□□□□ 0.6
CDT1-202ENST00000562747 EDIL3O43854 480 aa18.78■□□□□ 0.6
CDT1-202ENST00000562747 MCM2P49736 904 aa18.78■□□□□ 0.6
CDT1-202ENST00000562747 ITGB3BPQ13352 177 aaPredicted RBP18.78■□□□□ 0.6
CDT1-202ENST00000562747 TRIM29Q14134 588 aa18.78■□□□□ 0.6
CDT1-202ENST00000562747 PRR16Q569H4 304 aa18.78■□□□□ 0.6
CDT1-202ENST00000562747 MOXD1Q6UVY6 613 aa18.78■□□□□ 0.6
CDT1-202ENST00000562747 CAGE1Q8TC20 777 aa18.78■□□□□ 0.6
CDT1-202ENST00000562747 ZNF577Q9BSK1 485 aa18.78■□□□□ 0.6
CDT1-202ENST00000562747 TELO2Q9Y4R8 837 aa18.78■□□□□ 0.6
CDT1-202ENST00000562747 SIP14410 1827 aa18.78■□□□□ 0.6
CDT1-202ENST00000562747 CYP3A7-CYP3A51PA0A087WV96 503 aa18.77■□□□□ 0.6
CDT1-202ENST00000562747 CCDC194A0A1B0GVG4 234 aa18.77■□□□□ 0.6
CDT1-202ENST00000562747 TLL1O43897 1013 aa18.77■□□□□ 0.6
CDT1-202ENST00000562747 NBNO60934 754 aa18.77■□□□□ 0.6
CDT1-202ENST00000562747 SELPP16109 830 aa18.77■□□□□ 0.6
CDT1-202ENST00000562747 CYP3A7P24462 503 aa18.77■□□□□ 0.6
CDT1-202ENST00000562747 KRT2P35908 639 aa18.77■□□□□ 0.6
CDT1-202ENST00000562747 RBL2Q08999 1139 aa18.77■□□□□ 0.6
CDT1-202ENST00000562747 AAK1Q2M2I8 961 aa18.77■□□□□ 0.6
CDT1-202ENST00000562747 UTP14CQ5TAP6 766 aaKnown RBP18.77■□□□□ 0.6
CDT1-202ENST00000562747 LRRC8DQ7L1W4 858 aa18.77■□□□□ 0.6
CDT1-202ENST00000562747 GDPD5Q8WTR4 605 aa18.77■□□□□ 0.6
CDT1-202ENST00000562747 WNT8BQ93098 351 aa18.77■□□□□ 0.6
CDT1-202ENST00000562747 LENG9Q96B70 501 aa18.77■□□□□ 0.6
CDT1-202ENST00000562747 TBC1D22BQ9NU19 505 aa18.77■□□□□ 0.6
CDT1-202ENST00000562747 EMSYQ7Z589 1322 aa18.76■□□□□ 0.59
CDT1-202ENST00000562747 KIF28PB7ZC32 967 aa18.76■□□□□ 0.59
CDT1-202ENST00000562747 DHX15O43143 795 aaKnown RBP18.76■□□□□ 0.59
CDT1-202ENST00000562747 MMP1P03956 469 aa18.76■□□□□ 0.59
CDT1-202ENST00000562747 KCNJ6P48051 423 aa18.76■□□□□ 0.59
CDT1-202ENST00000562747 ACTR2P61160 394 aa18.76■□□□□ 0.59
CDT1-202ENST00000562747 Q4G0T1 1027 aa18.76■□□□□ 0.59
CDT1-202ENST00000562747 TRAF7Q6Q0C0 670 aa18.76■□□□□ 0.59
CDT1-202ENST00000562747 TRIM50Q86XT4 487 aa18.76■□□□□ 0.59
CDT1-202ENST00000562747 CCDC155Q8N6L0 562 aa18.76■□□□□ 0.59
CDT1-202ENST00000562747 OXER1Q8TDS5 423 aa18.76■□□□□ 0.59
CDT1-202ENST00000562747 SMARCAD1Q9H4L7 1026 aa18.76■□□□□ 0.59
CDT1-202ENST00000562747 LGR5O75473 907 aa18.75■□□□□ 0.59
CDT1-202ENST00000562747 ATG7O95352 703 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms