RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 PPP2R5CQ13362 524 aa18.87■□□□□ 0.61
CLK3-207ENST00000562389 SLFN12Q8IYM2 578 aa18.87■□□□□ 0.61
CLK3-207ENST00000562389 LBHD1Q9BQE6 289 aaPredicted RBP18.87■□□□□ 0.61
CLK3-207ENST00000562389 NOC4LQ9BVI4 516 aaKnown RBP18.87■□□□□ 0.61
CLK3-207ENST00000562389 HIPK3Q9H422 1215 aa18.87■□□□□ 0.61
CLK3-207ENST00000562389 DISC1Q9NRI5 854 aa18.87■□□□□ 0.61
CLK3-207ENST00000562389 PCDH10Q9P2E7 1040 aa18.87■□□□□ 0.61
CLK3-207ENST00000562389 NOL7Q9UMY1 257 aaKnown RBP18.87■□□□□ 0.61
CLK3-207ENST00000562389 NOD1Q9Y239 953 aa18.87■□□□□ 0.61
CLK3-207ENST00000562389 NRCAMQ92823 1304 aa18.86■□□□□ 0.61
CLK3-207ENST00000562389 IGSF9BQ9UPX0 1349 aa18.86■□□□□ 0.61
CLK3-207ENST00000562389 CHMP2AO43633 222 aa18.86■□□□□ 0.61
CLK3-207ENST00000562389 BAG4O95429 457 aaKnown RBP18.86■□□□□ 0.61
CLK3-207ENST00000562389 GNAT1P11488 350 aa18.86■□□□□ 0.61
CLK3-207ENST00000562389 CYP2C9P11712 490 aa18.86■□□□□ 0.61
CLK3-207ENST00000562389 MDM2Q00987 491 aaPredicted RBP18.86■□□□□ 0.61
CLK3-207ENST00000562389 HIC1Q14526 733 aa18.86■□□□□ 0.61
CLK3-207ENST00000562389 CALCRLQ16602 461 aa18.86■□□□□ 0.61
CLK3-207ENST00000562389 TTC38Q5R3I4 469 aa18.86■□□□□ 0.61
CLK3-207ENST00000562389 MCTP1Q6DN14 999 aa18.86■□□□□ 0.61
CLK3-207ENST00000562389 SWSAP1Q6NVH7 229 aa18.86■□□□□ 0.61
CLK3-207ENST00000562389 BADQ92934 168 aa18.86■□□□□ 0.61
CLK3-207ENST00000562389 PPP1R12CQ9BZL4 782 aa18.86■□□□□ 0.61
CLK3-207ENST00000562389 VAV3Q9UKW4 847 aa18.86■□□□□ 0.61
CLK3-207ENST00000562389 SAMM50Q9Y512 469 aa18.86■□□□□ 0.61
CLK3-207ENST00000562389 MAFBQ9Y5Q3 323 aaPredicted RBP18.86■□□□□ 0.61
CLK3-207ENST00000562389 CEP290O15078 2479 aa18.85■□□□□ 0.61
CLK3-207ENST00000562389 MARCH6O60337 910 aa18.85■□□□□ 0.61
CLK3-207ENST00000562389 ATP2B1P20020 1258 aa18.85■□□□□ 0.61
CLK3-207ENST00000562389 MCM7P33993 719 aa18.85■□□□□ 0.61
CLK3-207ENST00000562389 BMP8BP34820 402 aa18.85■□□□□ 0.61
CLK3-207ENST00000562389 ADAM17P78536 824 aa18.85■□□□□ 0.61
CLK3-207ENST00000562389 ZNF200P98182 395 aaPredicted RBP18.85■□□□□ 0.61
CLK3-207ENST00000562389 PTK7Q13308 1070 aa18.85■□□□□ 0.61
CLK3-207ENST00000562389 PLCB4Q15147 1175 aa18.85■□□□□ 0.61
CLK3-207ENST00000562389 MFSD5Q6N075 450 aa18.85■□□□□ 0.61
CLK3-207ENST00000562389 PDXDC2PQ6P474 469 aa18.85■□□□□ 0.61
CLK3-207ENST00000562389 CHRDL2Q6WN34 429 aa18.85■□□□□ 0.61
CLK3-207ENST00000562389 MIER3Q7Z3K6 550 aa18.85■□□□□ 0.61
CLK3-207ENST00000562389 CAGE1Q8TC20 777 aa18.85■□□□□ 0.61
CLK3-207ENST00000562389 TNPO1Q92973 898 aaKnown RBP18.85■□□□□ 0.61
CLK3-207ENST00000562389 PRO3102Q9H379 93 aa18.85■□□□□ 0.61
CLK3-207ENST00000562389 SETD4Q9NVD3 440 aa18.85■□□□□ 0.61
CLK3-207ENST00000562389 PITPNM1O00562 1244 aa18.84■□□□□ 0.61
CLK3-207ENST00000562389 RBL2Q08999 1139 aa18.84■□□□□ 0.61
CLK3-207ENST00000562389 PPFIA1Q13136 1202 aa18.84■□□□□ 0.61
CLK3-207ENST00000562389 BFSP2Q13515 415 aa18.84■□□□□ 0.61
CLK3-207ENST00000562389 CCDC155Q8N6L0 562 aa18.84■□□□□ 0.61
CLK3-207ENST00000562389 ATP8B4Q8TF62 1192 aa18.84■□□□□ 0.61
CLK3-207ENST00000562389 LMBR1Q8WVP7 490 aa18.84■□□□□ 0.61
CLK3-207ENST00000562389 ATP6V0A1Q93050 837 aa18.84■□□□□ 0.61
CLK3-207ENST00000562389 MTMR9Q96QG7 549 aa18.84■□□□□ 0.61
CLK3-207ENST00000562389 FOXD4L1Q9NU39 408 aa18.84■□□□□ 0.61
CLK3-207ENST00000562389 GABBR1Q9UBS5 961 aa18.84■□□□□ 0.61
CLK3-207ENST00000562389 TRPC6Q9Y210 931 aa18.84■□□□□ 0.61
CLK3-207ENST00000562389 UMODL1Q5DID0 1318 aa18.83■□□□□ 0.61
CLK3-207ENST00000562389 POTEB3A0JP26 581 aa18.83■□□□□ 0.6
CLK3-207ENST00000562389 CYP2C18P33260 490 aa18.83■□□□□ 0.6
CLK3-207ENST00000562389 TOB1P50616 345 aaPredicted RBP18.83■□□□□ 0.6
CLK3-207ENST00000562389 SPIRE1Q08AE8 756 aa18.83■□□□□ 0.6
CLK3-207ENST00000562389 ZNF174Q15697 407 aa18.83■□□□□ 0.6
CLK3-207ENST00000562389 GRIK4Q16099 956 aa18.83■□□□□ 0.6
CLK3-207ENST00000562389 RILPL1Q5EBL4 403 aa18.83■□□□□ 0.6
CLK3-207ENST00000562389 POTEBQ6S5H4 581 aa18.83■□□□□ 0.6
CLK3-207ENST00000562389 SERINC5Q86VE9 423 aa18.83■□□□□ 0.6
CLK3-207ENST00000562389 TMEM199Q8N511 208 aa18.83■□□□□ 0.6
CLK3-207ENST00000562389 DHX38Q92620 1227 aaKnown RBP18.83■□□□□ 0.6
CLK3-207ENST00000562389 WNT8AQ9H1J5 351 aa18.83■□□□□ 0.6
CLK3-207ENST00000562389 TMEM60Q9H2L4 133 aa18.83■□□□□ 0.6
CLK3-207ENST00000562389 COL1A2P08123 1366 aa18.82■□□□□ 0.6
CLK3-207ENST00000562389 MBLAC1A4D2B0 266 aaPredicted RBP18.82■□□□□ 0.6
CLK3-207ENST00000562389 RRN3P2A6NIE6 340 aa18.82■□□□□ 0.6
CLK3-207ENST00000562389 EML1O00423 815 aa18.82■□□□□ 0.6
CLK3-207ENST00000562389 TREHO43280 583 aa18.82■□□□□ 0.6
CLK3-207ENST00000562389 HBP1O60381 514 aa18.82■□□□□ 0.6
CLK3-207ENST00000562389 INSRRP14616 1297 aa18.82■□□□□ 0.6
CLK3-207ENST00000562389 ATP4AP20648 1035 aa18.82■□□□□ 0.6
CLK3-207ENST00000562389 SYT1P21579 422 aa18.82■□□□□ 0.6
CLK3-207ENST00000562389 FPGSQ05932 587 aa18.82■□□□□ 0.6
CLK3-207ENST00000562389 TRIM71Q2Q1W2 868 aaKnown RBP18.82■□□□□ 0.6
CLK3-207ENST00000562389 BBXQ8WY36 941 aaPredicted RBP18.82■□□□□ 0.6
CLK3-207ENST00000562389 FAM167AQ96KS9 214 aa18.82■□□□□ 0.6
CLK3-207ENST00000562389 PCDHA12Q9UN75 941 aa18.82■□□□□ 0.6
CLK3-207ENST00000562389 VPS37CA5D8V6 355 aaPredicted RBP18.81■□□□□ 0.6
CLK3-207ENST00000562389 OR52Z1P0C646 297 aa18.81■□□□□ 0.6
CLK3-207ENST00000562389 PPIGQ13427 754 aaKnown RBP eCLIP18.81■□□□□ 0.69e-10■□□□□ 10
CLK3-207ENST00000562389 NBR1Q14596 966 aa18.81■□□□□ 0.6
CLK3-207ENST00000562389 UGCGQ16739 394 aa18.81■□□□□ 0.6
CLK3-207ENST00000562389 MARCH8Q5T0T0 291 aa18.81■□□□□ 0.6
CLK3-207ENST00000562389 BRAPQ7Z569 592 aa18.81■□□□□ 0.6
CLK3-207ENST00000562389 CKAP2LQ8IYA6 745 aa18.81■□□□□ 0.6
CLK3-207ENST00000562389 RETREG2Q8NC44 543 aa18.81■□□□□ 0.6
CLK3-207ENST00000562389 WNT8BQ93098 351 aa18.81■□□□□ 0.6
CLK3-207ENST00000562389 UBE2OQ9C0C9 1292 aaKnown RBP18.81■□□□□ 0.6
CLK3-207ENST00000562389 TTC12Q9H892 705 aaPredicted RBP18.81■□□□□ 0.6
CLK3-207ENST00000562389 TUBE1Q9UJT0 475 aa18.81■□□□□ 0.6
CLK3-207ENST00000562389 COLQQ9Y215 455 aaPredicted RBP18.81■□□□□ 0.6
CLK3-207ENST00000562389 PCDHB6Q9Y5E3 794 aa18.81■□□□□ 0.6
CLK3-207ENST00000562389 SCN5AQ14524 2016 aa18.81■□□□□ 0.6
CLK3-207ENST00000562389 ZNF862O60290 1169 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms