RNA–Protein interactions for RNA: ENST00000561749.1

SMPD3-202, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-202ENST00000561749 NOC4LQ9BVI4 516 aaKnown RBP26.41■■□□□ 1.82
SMPD3-202ENST00000561749 ZNF302Q9NR11 478 aa26.41■■□□□ 1.82
SMPD3-202ENST00000561749 SCN5AQ14524 2016 aa26.41■■□□□ 1.82
SMPD3-202ENST00000561749 IGKV6D-21A0A0A0MT36 114 aa26.4■■□□□ 1.82
SMPD3-202ENST00000561749 WDR64B1ANS9 1081 aa26.4■■□□□ 1.82
SMPD3-202ENST00000561749 TIMP1P01033 207 aa26.4■■□□□ 1.82
SMPD3-202ENST00000561749 PSAPP07602 524 aa26.4■■□□□ 1.82
SMPD3-202ENST00000561749 NBR1Q14596 966 aa26.4■■□□□ 1.82
SMPD3-202ENST00000561749 ZNF174Q15697 407 aa26.4■■□□□ 1.82
SMPD3-202ENST00000561749 MIER3Q7Z3K6 550 aa26.4■■□□□ 1.82
SMPD3-202ENST00000561749 INTS4Q96HW7 963 aaKnown RBP26.4■■□□□ 1.82
SMPD3-202ENST00000561749 FAM20AQ96MK3 541 aa26.4■■□□□ 1.82
SMPD3-202ENST00000561749 DISC1Q9NRI5 854 aa26.4■■□□□ 1.82
SMPD3-202ENST00000561749 PCDHA10Q9Y5I2 948 aa26.4■■□□□ 1.82
SMPD3-202ENST00000561749 TANC1Q9C0D5 1861 aa26.4■■□□□ 1.82
SMPD3-202ENST00000561749 NEMFO60524 1076 aa26.39■■□□□ 1.82
SMPD3-202ENST00000561749 PLCB4Q15147 1175 aa26.39■■□□□ 1.82
SMPD3-202ENST00000561749 CALCRLQ16602 461 aa26.39■■□□□ 1.82
SMPD3-202ENST00000561749 TTC38Q5R3I4 469 aa26.39■■□□□ 1.82
SMPD3-202ENST00000561749 PDXDC2PQ6P474 469 aa26.39■■□□□ 1.82
SMPD3-202ENST00000561749 PLPPR4Q7Z2D5 763 aa26.39■■□□□ 1.82
SMPD3-202ENST00000561749 TRMT1LQ7Z2T5 733 aaKnown RBP26.39■■□□□ 1.82
SMPD3-202ENST00000561749 GDF15Q99988 308 aa26.39■■□□□ 1.82
SMPD3-202ENST00000561749 GABBR1Q9UBS5 961 aa26.39■■□□□ 1.82
SMPD3-202ENST00000561749 NOL7Q9UMY1 257 aaKnown RBP26.39■■□□□ 1.82
SMPD3-202ENST00000561749 TRPC6Q9Y210 931 aa26.39■■□□□ 1.82
SMPD3-202ENST00000561749 VPS37CA5D8V6 355 aaPredicted RBP26.38■■□□□ 1.81
SMPD3-202ENST00000561749 TBX3O15119 743 aa26.38■■□□□ 1.81
SMPD3-202ENST00000561749 BAG4O95429 457 aaKnown RBP26.38■■□□□ 1.81
SMPD3-202ENST00000561749 JAK3P52333 1124 aa26.38■■□□□ 1.81
SMPD3-202ENST00000561749 CCL23P55773 120 aa26.38■■□□□ 1.81
SMPD3-202ENST00000561749 IGBP1P78318 339 aa26.38■■□□□ 1.81
SMPD3-202ENST00000561749 PPFIA1Q13136 1202 aa26.38■■□□□ 1.81
SMPD3-202ENST00000561749 LMBR1Q8WVP7 490 aa26.38■■□□□ 1.81
SMPD3-202ENST00000561749 DHX38Q92620 1227 aaKnown RBP26.38■■□□□ 1.81
SMPD3-202ENST00000561749 ATP6V0A1Q93050 837 aa26.38■■□□□ 1.81
SMPD3-202ENST00000561749 TMEM60Q9H2L4 133 aa26.38■■□□□ 1.81
SMPD3-202ENST00000561749 VAV3Q9UKW4 847 aa26.38■■□□□ 1.81
SMPD3-202ENST00000561749 COLQQ9Y215 455 aaPredicted RBP26.38■■□□□ 1.81
SMPD3-202ENST00000561749 TREHO43280 583 aa26.37■■□□□ 1.81
SMPD3-202ENST00000561749 SFNP31947 248 aa26.37■■□□□ 1.81
SMPD3-202ENST00000561749 GRIK4Q16099 956 aa26.37■■□□□ 1.81
SMPD3-202ENST00000561749 B3GNT9Q6UX72 402 aa26.37■■□□□ 1.81
SMPD3-202ENST00000561749 CKAP2LQ8IYA6 745 aa26.37■■□□□ 1.81
SMPD3-202ENST00000561749 AFAP1L1Q8TED9 768 aa26.37■■□□□ 1.81
SMPD3-202ENST00000561749 WNT8BQ93098 351 aa26.37■■□□□ 1.81
SMPD3-202ENST00000561749 POTEB3A0JP26 581 aa26.36■■□□□ 1.81
SMPD3-202ENST00000561749 EML1O00423 815 aa26.36■■□□□ 1.81
SMPD3-202ENST00000561749 INSRRP14616 1297 aa26.36■■□□□ 1.81
SMPD3-202ENST00000561749 ATP4AP20648 1035 aa26.36■■□□□ 1.81
SMPD3-202ENST00000561749 HOXC8P31273 242 aa26.36■■□□□ 1.81
SMPD3-202ENST00000561749 TOB1P50616 345 aaPredicted RBP26.36■■□□□ 1.81
SMPD3-202ENST00000561749 UGCGQ16739 394 aa26.36■■□□□ 1.81
SMPD3-202ENST00000561749 POTEBQ6S5H4 581 aa26.36■■□□□ 1.81
SMPD3-202ENST00000561749 SLFN12Q8IYM2 578 aa26.36■■□□□ 1.81
SMPD3-202ENST00000561749 SPRYD3Q8NCJ5 442 aa26.36■■□□□ 1.81
SMPD3-202ENST00000561749 TRAPPC12Q8WVT3 735 aa26.36■■□□□ 1.81
SMPD3-202ENST00000561749 UBE2OQ9C0C9 1292 aaKnown RBP26.36■■□□□ 1.81
SMPD3-202ENST00000561749 WNT8AQ9H1J5 351 aa26.36■■□□□ 1.81
SMPD3-202ENST00000561749 HSP90AA1P07900 732 aaKnown RBP26.35■■□□□ 1.81
SMPD3-202ENST00000561749 TXKP42681 527 aa26.35■■□□□ 1.81
SMPD3-202ENST00000561749 PPP2R5CQ13362 524 aa26.35■■□□□ 1.81
SMPD3-202ENST00000561749 NCAPH2Q6IBW4 605 aa26.35■■□□□ 1.81
SMPD3-202ENST00000561749 MFSD5Q6N075 450 aa26.35■■□□□ 1.81
SMPD3-202ENST00000561749 ZBTB10Q96DT7 871 aa26.35■■□□□ 1.81
SMPD3-202ENST00000561749 SCLYQ96I15 445 aa26.35■■□□□ 1.81
SMPD3-202ENST00000561749 MAFBQ9Y5Q3 323 aaPredicted RBP26.35■■□□□ 1.81
SMPD3-202ENST00000561749 NRCAMQ92823 1304 aa26.35■■□□□ 1.81
SMPD3-202ENST00000561749 IGSF9BQ9UPX0 1349 aa26.35■■□□□ 1.81
SMPD3-202ENST00000561749 EVPLQ92817 2033 aa26.34■■□□□ 1.81
SMPD3-202ENST00000561749 RBAK-RBAKDNI3L0D1 243 aa26.34■■□□□ 1.81
SMPD3-202ENST00000561749 GNAT1P11488 350 aa26.34■■□□□ 1.81
SMPD3-202ENST00000561749 CSF2RAP15509 400 aa26.34■■□□□ 1.81
SMPD3-202ENST00000561749 PDCP20941 246 aa26.34■■□□□ 1.81
SMPD3-202ENST00000561749 SYT1P21579 422 aa26.34■■□□□ 1.81
SMPD3-202ENST00000561749 TRAPPC10P48553 1259 aa26.34■■□□□ 1.81
SMPD3-202ENST00000561749 FPGSQ05932 587 aa26.34■■□□□ 1.81
SMPD3-202ENST00000561749 PTK7Q13308 1070 aa26.34■■□□□ 1.81
SMPD3-202ENST00000561749 FERMT3Q86UX7 667 aa26.34■■□□□ 1.81
SMPD3-202ENST00000561749 RDM1Q8NG50 284 aa26.34■■□□□ 1.81
SMPD3-202ENST00000561749 ATP8B4Q8TF62 1192 aa26.34■■□□□ 1.81
SMPD3-202ENST00000561749 MTMR9Q96QG7 549 aa26.34■■□□□ 1.81
SMPD3-202ENST00000561749 PCDHB6Q9Y5E3 794 aa26.34■■□□□ 1.81
SMPD3-202ENST00000561749 ZNF862O60290 1169 aa26.33■■□□□ 1.81
SMPD3-202ENST00000561749 SLC26A2P50443 739 aa26.33■■□□□ 1.81
SMPD3-202ENST00000561749 EPHB4P54760 987 aa26.33■■□□□ 1.81
SMPD3-202ENST00000561749 ADAM17P78536 824 aa26.33■■□□□ 1.81
SMPD3-202ENST00000561749 BFSP2Q13515 415 aa26.33■■□□□ 1.81
SMPD3-202ENST00000561749 SERINC5Q86VE9 423 aa26.33■■□□□ 1.81
SMPD3-202ENST00000561749 TMEM199Q8N511 208 aa26.33■■□□□ 1.81
SMPD3-202ENST00000561749 CCDC155Q8N6L0 562 aa26.33■■□□□ 1.81
SMPD3-202ENST00000561749 RETREG2Q8NC44 543 aa26.33■■□□□ 1.81
SMPD3-202ENST00000561749 BANK1Q8NDB2 785 aa26.33■■□□□ 1.81
SMPD3-202ENST00000561749 PRO3102Q9H379 93 aa26.33■■□□□ 1.81
SMPD3-202ENST00000561749 TTC12Q9H892 705 aaPredicted RBP26.33■■□□□ 1.81
SMPD3-202ENST00000561749 SPIRE1Q08AE8 756 aa26.32■■□□□ 1.8
SMPD3-202ENST00000561749 TRIM71Q2Q1W2 868 aaKnown RBP26.32■■□□□ 1.8
SMPD3-202ENST00000561749 RUFY4Q6ZNE9 571 aa26.32■■□□□ 1.8
SMPD3-202ENST00000561749 TUBE1Q9UJT0 475 aa26.32■■□□□ 1.8
SMPD3-202ENST00000561749 PCDHA12Q9UN75 941 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms