RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 ZNF302Q9NR11 478 aa11.45□□□□□ -0.58
HERC1-212ENST00000561348 TBC1D22BQ9NU19 505 aa11.45□□□□□ -0.58
HERC1-212ENST00000561348 LTBP2Q14767 1821 aa11.44□□□□□ -0.58
HERC1-212ENST00000561348 H3BQV1 296 aa11.44□□□□□ -0.58
HERC1-212ENST00000561348 M0R2N6 131 aa11.44□□□□□ -0.58
HERC1-212ENST00000561348 SLC37A4O43826 429 aa11.44□□□□□ -0.58
HERC1-212ENST00000561348 FGBP02675 491 aa11.44□□□□□ -0.58
HERC1-212ENST00000561348 PSAPP07602 524 aa11.44□□□□□ -0.58
HERC1-212ENST00000561348 HOXD8P13378 290 aaPredicted RBP11.44□□□□□ -0.58
HERC1-212ENST00000561348 CIITAP33076 1130 aa11.44□□□□□ -0.58
HERC1-212ENST00000561348 KRT76Q01546 638 aa11.44□□□□□ -0.58
HERC1-212ENST00000561348 GRIK4Q16099 956 aa11.44□□□□□ -0.58
HERC1-212ENST00000561348 MIER3Q7Z3K6 550 aa11.44□□□□□ -0.58
HERC1-212ENST00000561348 RPUSD2Q8IZ73 545 aaKnown RBP11.44□□□□□ -0.58
HERC1-212ENST00000561348 LMBR1Q8WVP7 490 aa11.44□□□□□ -0.58
HERC1-212ENST00000561348 TRAPPC12Q8WVT3 735 aa11.44□□□□□ -0.58
HERC1-212ENST00000561348 CRYGNQ8WXF5 182 aa11.44□□□□□ -0.58
HERC1-212ENST00000561348 LRCH3Q96II8 777 aa11.44□□□□□ -0.58
HERC1-212ENST00000561348 IL23AQ9NPF7 189 aa11.44□□□□□ -0.58
HERC1-212ENST00000561348 GABBR1Q9UBS5 961 aa11.44□□□□□ -0.58
HERC1-212ENST00000561348 SMC3Q9UQE7 1217 aa11.44□□□□□ -0.58
HERC1-212ENST00000561348 POTEB3A0JP26 581 aa11.43□□□□□ -0.58
HERC1-212ENST00000561348 SOX1O00570 391 aaPredicted RBP11.43□□□□□ -0.58
HERC1-212ENST00000561348 DHX15O43143 795 aaKnown RBP11.43□□□□□ -0.58
HERC1-212ENST00000561348 EDIL3O43854 480 aa11.43□□□□□ -0.58
HERC1-212ENST00000561348 BAG4O95429 457 aaKnown RBP11.43□□□□□ -0.58
HERC1-212ENST00000561348 IQCF3P0C7M6 154 aa11.43□□□□□ -0.58
HERC1-212ENST00000561348 CKBP12277 381 aa11.43□□□□□ -0.58
HERC1-212ENST00000561348 INSRRP14616 1297 aa11.43□□□□□ -0.58
HERC1-212ENST00000561348 GJB2P29033 226 aa11.43□□□□□ -0.58
HERC1-212ENST00000561348 MCM2P49736 904 aa11.43□□□□□ -0.58
HERC1-212ENST00000561348 PTK7Q13308 1070 aa11.43□□□□□ -0.58
HERC1-212ENST00000561348 ZNF618Q5T7W0 954 aa11.43□□□□□ -0.58
HERC1-212ENST00000561348 POTEBQ6S5H4 581 aa11.43□□□□□ -0.58
HERC1-212ENST00000561348 LRRC8DQ7L1W4 858 aa11.43□□□□□ -0.58
HERC1-212ENST00000561348 SESTD1Q86VW0 696 aa11.43□□□□□ -0.58
HERC1-212ENST00000561348 CCDC60Q8IWA6 550 aaPredicted RBP11.43□□□□□ -0.58
HERC1-212ENST00000561348 FAM177A1Q8N128 213 aaPredicted RBP11.43□□□□□ -0.58
HERC1-212ENST00000561348 DHX38Q92620 1227 aaKnown RBP11.43□□□□□ -0.58
HERC1-212ENST00000561348 WNT8BQ93098 351 aa11.43□□□□□ -0.58
HERC1-212ENST00000561348 PCYT2Q99447 389 aa11.43□□□□□ -0.58
HERC1-212ENST00000561348 PRO3102Q9H379 93 aa11.43□□□□□ -0.58
HERC1-212ENST00000561348 UNC45AQ9H3U1 944 aa11.43□□□□□ -0.58
HERC1-212ENST00000561348 DISC1Q9NRI5 854 aa11.43□□□□□ -0.58
HERC1-212ENST00000561348 TUBE1Q9UJT0 475 aa11.43□□□□□ -0.58
HERC1-212ENST00000561348 KIF3AQ9Y496 699 aa11.43□□□□□ -0.58
HERC1-212ENST00000561348 PCDHA10Q9Y5I2 948 aa11.43□□□□□ -0.58
HERC1-212ENST00000561348 NRCAMQ92823 1304 aa11.42□□□□□ -0.58
HERC1-212ENST00000561348 SCN5AQ14524 2016 aa11.42□□□□□ -0.58
HERC1-212ENST00000561348 WDR64B1ANS9 1081 aa11.42□□□□□ -0.58
HERC1-212ENST00000561348 SELPP16109 830 aa11.42□□□□□ -0.58
HERC1-212ENST00000561348 IBSPP21815 317 aaPredicted RBP11.42□□□□□ -0.58
HERC1-212ENST00000561348 MCM7P33993 719 aa11.42□□□□□ -0.58
HERC1-212ENST00000561348 FXR1P51114 621 aaKnown RBP eCLIP11.42□□□□□ -0.58
HERC1-212ENST00000561348 TMEM62Q0P6H9 643 aa11.42□□□□□ -0.58
HERC1-212ENST00000561348 PLCB4Q15147 1175 aa11.42□□□□□ -0.58
HERC1-212ENST00000561348 Q4G0T1 1027 aa11.42□□□□□ -0.58
HERC1-212ENST00000561348 TMEM240Q5SV17 173 aa11.42□□□□□ -0.58
HERC1-212ENST00000561348 NCAPH2Q6IBW4 605 aa11.42□□□□□ -0.58
HERC1-212ENST00000561348 ZNF746Q6NUN9 644 aaPredicted RBP11.42□□□□□ -0.58
HERC1-212ENST00000561348 PSRC1Q6PGN9 363 aaPredicted RBP11.42□□□□□ -0.58
HERC1-212ENST00000561348 ABHD15Q6UXT9 468 aa11.42□□□□□ -0.58
HERC1-212ENST00000561348 C16orf59Q7L2K0 433 aa11.42□□□□□ -0.58
HERC1-212ENST00000561348 CAGE1Q8TC20 777 aa11.42□□□□□ -0.58
HERC1-212ENST00000561348 AFAP1L1Q8TED9 768 aa11.42□□□□□ -0.58
HERC1-212ENST00000561348 DNAJB3Q8WWF6 145 aa11.42□□□□□ -0.58
HERC1-212ENST00000561348 SLC5A5Q92911 643 aa11.42□□□□□ -0.58
HERC1-212ENST00000561348 TNPO1Q92973 898 aaKnown RBP11.42□□□□□ -0.58
HERC1-212ENST00000561348 LENG9Q96B70 501 aa11.42□□□□□ -0.58
HERC1-212ENST00000561348 FAM161BQ96MY7 647 aa11.42□□□□□ -0.58
HERC1-212ENST00000561348 PPP1R16BQ96T49 567 aa11.42□□□□□ -0.58
HERC1-212ENST00000561348 NAP1L4Q99733 375 aaKnown RBP11.42□□□□□ -0.58
HERC1-212ENST00000561348 MTIF3Q9H2K0 278 aaKnown RBP11.42□□□□□ -0.58
HERC1-212ENST00000561348 GINS2Q9Y248 185 aa11.42□□□□□ -0.58
HERC1-212ENST00000561348 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.42□□□□□ -0.58
HERC1-212ENST00000561348 EMSYQ7Z589 1322 aa11.41□□□□□ -0.58
HERC1-212ENST00000561348 A0A1W2PPC1 479 aa11.41□□□□□ -0.58
HERC1-212ENST00000561348 GRXCR1A8MXD5 290 aa11.41□□□□□ -0.58
HERC1-212ENST00000561348 RSPH10B2B2RC85 870 aa11.41□□□□□ -0.58
HERC1-212ENST00000561348 PITPNM1O00562 1244 aa11.41□□□□□ -0.58
HERC1-212ENST00000561348 LGR5O75473 907 aa11.41□□□□□ -0.58
HERC1-212ENST00000561348 RSPH10BP0C881 870 aa11.41□□□□□ -0.58
HERC1-212ENST00000561348 ACTN1P12814 892 aa11.41□□□□□ -0.58
HERC1-212ENST00000561348 GCFC2P16383 781 aaKnown RBP11.41□□□□□ -0.58
HERC1-212ENST00000561348 TXKP42681 527 aa11.41□□□□□ -0.58
HERC1-212ENST00000561348 ZNF174Q15697 407 aa11.41□□□□□ -0.58
HERC1-212ENST00000561348 CALCRLQ16602 461 aa11.41□□□□□ -0.58
HERC1-212ENST00000561348 RUFY4Q6ZNE9 571 aa11.41□□□□□ -0.58
HERC1-212ENST00000561348 PLPPR4Q7Z2D5 763 aa11.41□□□□□ -0.58
HERC1-212ENST00000561348 SERINC5Q86VE9 423 aa11.41□□□□□ -0.58
HERC1-212ENST00000561348 SMAP1Q8IYB5 467 aaPredicted RBP11.41□□□□□ -0.58
HERC1-212ENST00000561348 METTL13Q8N6R0 699 aa11.41□□□□□ -0.58
HERC1-212ENST00000561348 BANK1Q8NDB2 785 aa11.41□□□□□ -0.58
HERC1-212ENST00000561348 FBXO18Q8NFZ0 1043 aa11.41□□□□□ -0.58
HERC1-212ENST00000561348 CTAGE1Q96RT6 745 aa11.41□□□□□ -0.58
HERC1-212ENST00000561348 RIT2Q99578 217 aa11.41□□□□□ -0.58
HERC1-212ENST00000561348 MYH9P35579 1960 aaKnown RBP11.4□□□□□ -0.58
HERC1-212ENST00000561348 CYP3A7-CYP3A51PA0A087WV96 503 aa11.4□□□□□ -0.58
HERC1-212ENST00000561348 RRN3P2A6NIE6 340 aa11.4□□□□□ -0.58
HERC1-212ENST00000561348 HBP1O60381 514 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms