RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 TMEM240Q5SV17 173 aa17.29■□□□□ 0.36
SNRPA1-213ENST00000560856 TRAF7Q6Q0C0 670 aa17.29■□□□□ 0.36
SNRPA1-213ENST00000560856 CAGE1Q8TC20 777 aa17.29■□□□□ 0.36
SNRPA1-213ENST00000560856 AFAP1L1Q8TED9 768 aa17.29■□□□□ 0.36
SNRPA1-213ENST00000560856 LMBR1Q8WVP7 490 aa17.29■□□□□ 0.36
SNRPA1-213ENST00000560856 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.29■□□□□ 0.362e-8■□□□□ 10.1
SNRPA1-213ENST00000560856 BRMS1Q9HCU9 246 aa17.29■□□□□ 0.36
SNRPA1-213ENST00000560856 KCNMB3Q9NPA1 279 aa17.29■□□□□ 0.36
SNRPA1-213ENST00000560856 IL23AQ9NPF7 189 aa17.29■□□□□ 0.36
SNRPA1-213ENST00000560856 DDX25Q9UHL0 483 aaKnown RBP17.29■□□□□ 0.36
SNRPA1-213ENST00000560856 NOD1Q9Y239 953 aa17.29■□□□□ 0.36
SNRPA1-213ENST00000560856 NRCAMQ92823 1304 aa17.28■□□□□ 0.36
SNRPA1-213ENST00000560856 ACRP10323 421 aa17.28■□□□□ 0.36
SNRPA1-213ENST00000560856 GCFC2P16383 781 aaKnown RBP17.28■□□□□ 0.36
SNRPA1-213ENST00000560856 MARCH8Q5T0T0 291 aa17.28■□□□□ 0.36
SNRPA1-213ENST00000560856 RASIP1Q5U651 963 aa17.28■□□□□ 0.36
SNRPA1-213ENST00000560856 SMAP1Q8IYB5 467 aaPredicted RBP17.28■□□□□ 0.36
SNRPA1-213ENST00000560856 TET1Q8NFU7 2136 aa17.28■□□□□ 0.36
SNRPA1-213ENST00000560856 HAS1Q92839 578 aa17.28■□□□□ 0.36
SNRPA1-213ENST00000560856 ATP6V0A1Q93050 837 aa17.28■□□□□ 0.36
SNRPA1-213ENST00000560856 UNC45AQ9H3U1 944 aa17.28■□□□□ 0.36
SNRPA1-213ENST00000560856 LAMA2P24043 3122 aaKnown RBP17.27■□□□□ 0.36
SNRPA1-213ENST00000560856 MBLAC1A4D2B0 266 aaPredicted RBP17.27■□□□□ 0.36
SNRPA1-213ENST00000560856 RBAK-RBAKDNI3L0D1 243 aa17.27■□□□□ 0.36
SNRPA1-213ENST00000560856 GAS7O60861 476 aa17.27■□□□□ 0.36
SNRPA1-213ENST00000560856 CKBP12277 381 aa17.27■□□□□ 0.36
SNRPA1-213ENST00000560856 INSRRP14616 1297 aa17.27■□□□□ 0.36
SNRPA1-213ENST00000560856 PPFIA1Q13136 1202 aa17.27■□□□□ 0.36
SNRPA1-213ENST00000560856 CUL4AQ13619 759 aa17.27■□□□□ 0.36
SNRPA1-213ENST00000560856 LRCH2Q5VUJ6 765 aa17.27■□□□□ 0.36
SNRPA1-213ENST00000560856 SWSAP1Q6NVH7 229 aa17.27■□□□□ 0.36
SNRPA1-213ENST00000560856 MIS18BP1Q6P0N0 1132 aa17.27■□□□□ 0.36
SNRPA1-213ENST00000560856 ZNF365Q70YC5 407 aa17.27■□□□□ 0.36
SNRPA1-213ENST00000560856 FAM184AQ8NB25 1140 aa17.27■□□□□ 0.36
SNRPA1-213ENST00000560856 AZI2Q9H6S1 392 aa17.27■□□□□ 0.36
SNRPA1-213ENST00000560856 PCDHA10Q9Y5I2 948 aa17.27■□□□□ 0.36
SNRPA1-213ENST00000560856 MAFBQ9Y5Q3 323 aaPredicted RBP17.27■□□□□ 0.36
SNRPA1-213ENST00000560856 SCN5AQ14524 2016 aa17.26■□□□□ 0.35
SNRPA1-213ENST00000560856 KAT6AQ92794 2004 aa17.26■□□□□ 0.35
SNRPA1-213ENST00000560856 CCNT1O60563 726 aaKnown RBP17.26■□□□□ 0.35
SNRPA1-213ENST00000560856 GNAT1P11488 350 aa17.26■□□□□ 0.35
SNRPA1-213ENST00000560856 SELPP16109 830 aa17.26■□□□□ 0.35
SNRPA1-213ENST00000560856 SLC26A2P50443 739 aa17.26■□□□□ 0.35
SNRPA1-213ENST00000560856 GRIK4Q16099 956 aa17.26■□□□□ 0.35
SNRPA1-213ENST00000560856 ZNF618Q5T7W0 954 aa17.26■□□□□ 0.35
SNRPA1-213ENST00000560856 RETREG2Q8NC44 543 aa17.26■□□□□ 0.35
SNRPA1-213ENST00000560856 FAM20AQ96MK3 541 aa17.26■□□□□ 0.35
SNRPA1-213ENST00000560856 TEKT3Q9BXF9 490 aa17.26■□□□□ 0.35
SNRPA1-213ENST00000560856 FOXP1Q9H334 677 aaPredicted RBP17.26■□□□□ 0.35
SNRPA1-213ENST00000560856 ZNF302Q9NR11 478 aa17.26■□□□□ 0.35
SNRPA1-213ENST00000560856 DISC1Q9NRI5 854 aa17.26■□□□□ 0.35
SNRPA1-213ENST00000560856 POTEB3A0JP26 581 aa17.25■□□□□ 0.35
SNRPA1-213ENST00000560856 WDR64B1ANS9 1081 aa17.25■□□□□ 0.35
SNRPA1-213ENST00000560856 KIF28PB7ZC32 967 aa17.25■□□□□ 0.35
SNRPA1-213ENST00000560856 BACH1O14867 736 aa17.25■□□□□ 0.35
SNRPA1-213ENST00000560856 TBX3O15119 743 aa17.25■□□□□ 0.35
SNRPA1-213ENST00000560856 ZNF862O60290 1169 aa17.25■□□□□ 0.35
SNRPA1-213ENST00000560856 PSAPP07602 524 aa17.25■□□□□ 0.35
SNRPA1-213ENST00000560856 MBTPS1Q14703 1052 aa17.25■□□□□ 0.35
SNRPA1-213ENST00000560856 SAFBQ15424 915 aaKnown RBP eCLIP17.25■□□□□ 0.35
SNRPA1-213ENST00000560856 FAM160B1Q5W0V3 765 aa17.25■□□□□ 0.35
SNRPA1-213ENST00000560856 PDXDC2PQ6P474 469 aa17.25■□□□□ 0.35
SNRPA1-213ENST00000560856 POTEBQ6S5H4 581 aa17.25■□□□□ 0.35
SNRPA1-213ENST00000560856 RUFY4Q6ZNE9 571 aa17.25■□□□□ 0.35
SNRPA1-213ENST00000560856 LRRC8DQ7L1W4 858 aa17.25■□□□□ 0.35
SNRPA1-213ENST00000560856 RPAINQ86UA6 219 aa17.25■□□□□ 0.35
SNRPA1-213ENST00000560856 POTEDQ86YR6 584 aa17.25■□□□□ 0.35
SNRPA1-213ENST00000560856 CCDC155Q8N6L0 562 aa17.25■□□□□ 0.35
SNRPA1-213ENST00000560856 ATP8B4Q8TF62 1192 aa17.25■□□□□ 0.35
SNRPA1-213ENST00000560856 NAP1L4Q99733 375 aaKnown RBP17.25■□□□□ 0.35
SNRPA1-213ENST00000560856 VAV3Q9UKW4 847 aa17.25■□□□□ 0.35
SNRPA1-213ENST00000560856 IGSF9BQ9UPX0 1349 aa17.24■□□□□ 0.35
SNRPA1-213ENST00000560856 RRN3P2A6NIE6 340 aa17.24■□□□□ 0.35
SNRPA1-213ENST00000560856 ZBTB42B2RXF5 422 aa17.24■□□□□ 0.35
SNRPA1-213ENST00000560856 EML1O00423 815 aa17.24■□□□□ 0.35
SNRPA1-213ENST00000560856 NBNO60934 754 aa17.24■□□□□ 0.35
SNRPA1-213ENST00000560856 U2AF2P26368 475 aaKnown RBP eCLIP17.24■□□□□ 0.352e-6■□□□□ 8.1
SNRPA1-213ENST00000560856 GJB2P29033 226 aa17.24■□□□□ 0.35
SNRPA1-213ENST00000560856 RFC2P35250 354 aa17.24■□□□□ 0.35
SNRPA1-213ENST00000560856 UGCGQ16739 394 aa17.24■□□□□ 0.35
SNRPA1-213ENST00000560856 PSRC1Q6PGN9 363 aaPredicted RBP17.24■□□□□ 0.35
SNRPA1-213ENST00000560856 RPUSD2Q8IZ73 545 aaKnown RBP17.24■□□□□ 0.35
SNRPA1-213ENST00000560856 RDM1Q8NG50 284 aa17.24■□□□□ 0.35
SNRPA1-213ENST00000560856 TRAPPC12Q8WVT3 735 aa17.24■□□□□ 0.35
SNRPA1-213ENST00000560856 HERVK_113Q902F9 699 aa17.24■□□□□ 0.35
SNRPA1-213ENST00000560856 ZBTB10Q96DT7 871 aa17.24■□□□□ 0.35
SNRPA1-213ENST00000560856 LRCH3Q96II8 777 aa17.24■□□□□ 0.35
SNRPA1-213ENST00000560856 GABBR1Q9UBS5 961 aa17.24■□□□□ 0.35
SNRPA1-213ENST00000560856 SZT2Q5T011 3432 aa17.24■□□□□ 0.35
SNRPA1-213ENST00000560856 WDR81Q562E7 1941 aa17.23■□□□□ 0.35
SNRPA1-213ENST00000560856 TANC1Q9C0D5 1861 aa17.23■□□□□ 0.35
SNRPA1-213ENST00000560856 CHMP2AO43633 222 aa17.23■□□□□ 0.35
SNRPA1-213ENST00000560856 HBP1O60381 514 aa17.23■□□□□ 0.35
SNRPA1-213ENST00000560856 STBD1O95210 358 aa17.23■□□□□ 0.35
SNRPA1-213ENST00000560856 FGBP02675 491 aa17.23■□□□□ 0.35
SNRPA1-213ENST00000560856 CXCL10P02778 98 aa17.23■□□□□ 0.35
SNRPA1-213ENST00000560856 SFNP31947 248 aa17.23■□□□□ 0.35
SNRPA1-213ENST00000560856 THPOP40225 353 aa17.23■□□□□ 0.35
SNRPA1-213ENST00000560856 JAK3P52333 1124 aa17.23■□□□□ 0.35
SNRPA1-213ENST00000560856 SPIRE1Q08AE8 756 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms