RNA–Protein interactions for RNA: ENST00000560716.1

APH1B-209, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 731 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-209ENST00000560716 NEDD9Q14511 834 aa8.66□□□□□ -1.02
APH1B-209ENST00000560716 LPIN1Q14693 890 aa8.66□□□□□ -1.02
APH1B-209ENST00000560716 CLUL1Q15846 466 aa8.66□□□□□ -1.02
APH1B-209ENST00000560716 FBXO47Q5MNV8 452 aa8.66□□□□□ -1.02
APH1B-209ENST00000560716 TSHZ3Q63HK5 1081 aa8.66□□□□□ -1.02
APH1B-209ENST00000560716 TSHZ1Q6ZSZ6 1077 aa8.66□□□□□ -1.02
APH1B-209ENST00000560716 EP400NLQ6ZTU2 488 aa8.66□□□□□ -1.02
APH1B-209ENST00000560716 ADGRD2Q7Z7M1 963 aa8.66□□□□□ -1.02
APH1B-209ENST00000560716 NPAS4Q8IUM7 802 aa8.66□□□□□ -1.02
APH1B-209ENST00000560716 EFCAB3Q8N7B9 438 aa8.66□□□□□ -1.02
APH1B-209ENST00000560716 PNMA1Q8ND90 353 aa8.66□□□□□ -1.02
APH1B-209ENST00000560716 LMBR1Q8WVP7 490 aa8.66□□□□□ -1.02
APH1B-209ENST00000560716 ATOH1Q92858 354 aaPredicted RBP8.66□□□□□ -1.02
APH1B-209ENST00000560716 GPR20Q99678 358 aa8.66□□□□□ -1.02
APH1B-209ENST00000560716 AMNQ9BXJ7 453 aa8.66□□□□□ -1.02
APH1B-209ENST00000560716 UBA5Q9GZZ9 404 aa8.66□□□□□ -1.02
APH1B-209ENST00000560716 S1PR5Q9H228 398 aa8.66□□□□□ -1.02
APH1B-209ENST00000560716 RNF41Q9H4P4 317 aaPredicted RBP8.66□□□□□ -1.02
APH1B-209ENST00000560716 MTMR7Q9Y216 660 aa8.66□□□□□ -1.02
APH1B-209ENST00000560716 MRPL42Q9Y6G3 142 aaKnown RBP8.66□□□□□ -1.02
APH1B-209ENST00000560716 KMT2BQ9UMN6 2715 aaPredicted RBP8.65□□□□□ -1.02
APH1B-209ENST00000560716 KDM3AQ9Y4C1 1321 aa8.65□□□□□ -1.02
APH1B-209ENST00000560716 WDR81Q562E7 1941 aa8.65□□□□□ -1.02
APH1B-209ENST00000560716 FSCN2O14926 492 aa8.65□□□□□ -1.02
APH1B-209ENST00000560716 CCND2P30279 289 aa8.65□□□□□ -1.02
APH1B-209ENST00000560716 CLCN5P51795 746 aa8.65□□□□□ -1.02
APH1B-209ENST00000560716 DUSP6Q16828 381 aa8.65□□□□□ -1.02
APH1B-209ENST00000560716 MCMDC2Q4G0Z9 681 aa8.65□□□□□ -1.02
APH1B-209ENST00000560716 MCTP2Q6DN12 878 aa8.65□□□□□ -1.02
APH1B-209ENST00000560716 XRRA1Q6P2D8 792 aa8.65□□□□□ -1.02
APH1B-209ENST00000560716 MFSD6Q6ZSS7 791 aa8.65□□□□□ -1.02
APH1B-209ENST00000560716 RTN4RL1Q86UN2 441 aaPredicted RBP8.65□□□□□ -1.02
APH1B-209ENST00000560716 KLHL23Q8NBE8 558 aa8.65□□□□□ -1.02
APH1B-209ENST00000560716 POF1BQ8WVV4 589 aa8.65□□□□□ -1.02
APH1B-209ENST00000560716 LINC01599Q8WXQ3 324 aa8.65□□□□□ -1.02
APH1B-209ENST00000560716 ESR2Q92731 530 aa8.65□□□□□ -1.02
APH1B-209ENST00000560716 EVI5LQ96CN4 794 aa8.65□□□□□ -1.02
APH1B-209ENST00000560716 MLXIPQ9HAP2 919 aa8.65□□□□□ -1.02
APH1B-209ENST00000560716 SETD4Q9NVD3 440 aa8.65□□□□□ -1.02
APH1B-209ENST00000560716 ZNF215Q9UL58 517 aaPredicted RBP8.65□□□□□ -1.02
APH1B-209ENST00000560716 LZTS1Q9Y250 596 aa8.65□□□□□ -1.02
APH1B-209ENST00000560716 GVINP1Q7Z2Y8 2422 aa8.65□□□□□ -1.02
APH1B-209ENST00000560716 DMXL1Q9Y485 3027 aa8.65□□□□□ -1.02
APH1B-209ENST00000560716 BAZ2BQ9UIF8 2168 aaKnown RBP8.64□□□□□ -1.03
APH1B-209ENST00000560716 FIBPO43427 364 aa8.64□□□□□ -1.03
APH1B-209ENST00000560716 PPP1R11O60927 126 aaPredicted RBP8.64□□□□□ -1.03
APH1B-209ENST00000560716 CFBP00751 764 aa8.64□□□□□ -1.03
APH1B-209ENST00000560716 GOLGA8HP0CJ92 632 aa8.64□□□□□ -1.03
APH1B-209ENST00000560716 HOXB8P17481 243 aaPredicted RBP8.64□□□□□ -1.03
APH1B-209ENST00000560716 MX1P20591 662 aa8.64□□□□□ -1.03
APH1B-209ENST00000560716 MRPS9P82933 396 aaKnown RBP8.64□□□□□ -1.03
APH1B-209ENST00000560716 SEMA3FQ13275 785 aa8.64□□□□□ -1.03
APH1B-209ENST00000560716 TMEM132AQ24JP5 1023 aa8.64□□□□□ -1.03
APH1B-209ENST00000560716 GNPTABQ3T906 1256 aa8.64□□□□□ -1.03
APH1B-209ENST00000560716 TBC1D10CQ8IV04 446 aa8.64□□□□□ -1.03
APH1B-209ENST00000560716 GIMAP8Q8ND71 665 aaPredicted RBP8.64□□□□□ -1.03
APH1B-209ENST00000560716 VN1R2Q8NFZ6 395 aa8.64□□□□□ -1.03
APH1B-209ENST00000560716 IL31RAQ8NI17 732 aa8.64□□□□□ -1.03
APH1B-209ENST00000560716 PHF12Q96QT6 1004 aa8.64□□□□□ -1.03
APH1B-209ENST00000560716 CPVLQ9H3G5 476 aa8.64□□□□□ -1.03
APH1B-209ENST00000560716 IGFLR1Q9H665 355 aa8.64□□□□□ -1.03
APH1B-209ENST00000560716 RIOX1Q9H6W3 641 aa8.64□□□□□ -1.03
APH1B-209ENST00000560716 FAM86C1Q9NVL1 165 aa8.64□□□□□ -1.03
APH1B-209ENST00000560716 TRPC6Q9Y210 931 aa8.64□□□□□ -1.03
APH1B-209ENST00000560716 EVPLQ92817 2033 aa8.64□□□□□ -1.03
APH1B-209ENST00000560716 IGSF9BQ9UPX0 1349 aa8.63□□□□□ -1.03
APH1B-209ENST00000560716 PALM3A6NDB9 673 aaPredicted RBP8.63□□□□□ -1.03
APH1B-209ENST00000560716 H0Y858 1186 aa8.63□□□□□ -1.03
APH1B-209ENST00000560716 HAX1O00165 279 aa8.63□□□□□ -1.03
APH1B-209ENST00000560716 ZBTB5O15062 677 aa8.63□□□□□ -1.03
APH1B-209ENST00000560716 CTSHP09668 335 aa8.63□□□□□ -1.03
APH1B-209ENST00000560716 PARP1P09874 1014 aaKnown RBP8.63□□□□□ -1.03
APH1B-209ENST00000560716 STAG3L1P0CL83 205 aa8.63□□□□□ -1.03
APH1B-209ENST00000560716 GHRP10912 638 aa8.63□□□□□ -1.03
APH1B-209ENST00000560716 ID4P47928 161 aa8.63□□□□□ -1.03
APH1B-209ENST00000560716 NRIP1P48552 1158 aa8.63□□□□□ -1.03
APH1B-209ENST00000560716 PLCB3Q01970 1234 aa8.63□□□□□ -1.03
APH1B-209ENST00000560716 RRP12Q5JTH9 1297 aaKnown RBP8.63□□□□□ -1.03
APH1B-209ENST00000560716 MARCH8Q5T0T0 291 aa8.63□□□□□ -1.03
APH1B-209ENST00000560716 RSPH3Q86UC2 560 aa8.63□□□□□ -1.03
APH1B-209ENST00000560716 IQCA1Q86XH1 822 aa8.63□□□□□ -1.03
APH1B-209ENST00000560716 HOMEZQ8IX15 550 aa8.63□□□□□ -1.03
APH1B-209ENST00000560716 ENAHQ8N8S7 591 aaPredicted RBP8.63□□□□□ -1.03
APH1B-209ENST00000560716 GPKOWQ92917 476 aaPredicted RBP eCLIP8.63□□□□□ -1.03
APH1B-209ENST00000560716 NEK1Q96PY6 1258 aa8.63□□□□□ -1.03
APH1B-209ENST00000560716 SEMA4AQ9H3S1 761 aa8.63□□□□□ -1.03
APH1B-209ENST00000560716 BCAS3Q9H6U6 928 aa8.63□□□□□ -1.03
APH1B-209ENST00000560716 TLE6Q9H808 572 aa8.63□□□□□ -1.03
APH1B-209ENST00000560716 AGO3Q9H9G7 860 aaKnown RBP8.63□□□□□ -1.03
APH1B-209ENST00000560716 TLR9Q9NR96 1032 aa8.63□□□□□ -1.03
APH1B-209ENST00000560716 BARX2Q9UMQ3 279 aaPredicted RBP8.63□□□□□ -1.03
APH1B-209ENST00000560716 SORCS3Q9UPU3 1222 aa8.63□□□□□ -1.03
APH1B-209ENST00000560716 NEDD4P46934 1319 aa8.62□□□□□ -1.03
APH1B-209ENST00000560716 A0A0D9SFI3 127 aa8.62□□□□□ -1.03
APH1B-209ENST00000560716 RBAK-RBAKDNI3L0D1 243 aa8.62□□□□□ -1.03
APH1B-209ENST00000560716 NOP56O00567 594 aaKnown RBP8.62□□□□□ -1.03
APH1B-209ENST00000560716 MYCLP12524 364 aaPredicted RBP8.62□□□□□ -1.03
APH1B-209ENST00000560716 MRPS6P82932 125 aaKnown RBP8.62□□□□□ -1.03
APH1B-209ENST00000560716 ARHGAP4P98171 946 aa8.62□□□□□ -1.03
APH1B-209ENST00000560716 HNRNPUQ00839 825 aaKnown RBP eCLIP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms