RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 SLC4A10Q6U841 1118 aa7.81□□□□□ -1.16
HERC1-208ENST00000560462 LYPD8Q6UX82 237 aa7.81□□□□□ -1.16
HERC1-208ENST00000560462 SESTD1Q86VW0 696 aa7.81□□□□□ -1.16
HERC1-208ENST00000560462 ZNF592Q92610 1267 aa7.81□□□□□ -1.16
HERC1-208ENST00000560462 ACSF2Q96CM8 615 aaPredicted RBP7.81□□□□□ -1.16
HERC1-208ENST00000560462 BCO2Q9BYV7 579 aa7.81□□□□□ -1.16
HERC1-208ENST00000560462 KCNK12Q9HB15 430 aa7.81□□□□□ -1.16
HERC1-208ENST00000560462 AATFQ9NY61 560 aaKnown RBP eCLIP7.81□□□□□ -1.16
HERC1-208ENST00000560462 KCNK4Q9NYG8 393 aa7.81□□□□□ -1.16
HERC1-208ENST00000560462 RAI14Q9P0K7 980 aa7.81□□□□□ -1.16
HERC1-208ENST00000560462 SPTAN1Q13813 2472 aaKnown RBP7.8□□□□□ -1.16
HERC1-208ENST00000560462 UBR5O95071 2799 aaPredicted RBP7.8□□□□□ -1.16
HERC1-208ENST00000560462 MPHOSPH10O00566 681 aaKnown RBP7.8□□□□□ -1.16
HERC1-208ENST00000560462 TROAPQ12815 778 aa7.8□□□□□ -1.16
HERC1-208ENST00000560462 PTK7Q13308 1070 aa7.8□□□□□ -1.16
HERC1-208ENST00000560462 STPG1Q5TH74 334 aa7.8□□□□□ -1.16
HERC1-208ENST00000560462 TMEM164Q5U3C3 297 aa7.8□□□□□ -1.16
HERC1-208ENST00000560462 CELF5Q8N6W0 485 aaKnown RBP7.8□□□□□ -1.16
HERC1-208ENST00000560462 OR6J1Q8NGC5 347 aa7.8□□□□□ -1.16
HERC1-208ENST00000560462 RASGRP4Q8TDF6 673 aa7.8□□□□□ -1.16
HERC1-208ENST00000560462 KAZALD1Q96I82 304 aa7.8□□□□□ -1.16
HERC1-208ENST00000560462 SUCLG2Q96I99 432 aa7.8□□□□□ -1.16
HERC1-208ENST00000560462 EHD4Q9H223 541 aa7.8□□□□□ -1.16
HERC1-208ENST00000560462 SH2D4AQ9H788 454 aa7.8□□□□□ -1.16
HERC1-208ENST00000560462 VCPKMTQ9H867 229 aa7.8□□□□□ -1.16
HERC1-208ENST00000560462 RC3H2Q9HBD1 1191 aaKnown RBP7.8□□□□□ -1.16
HERC1-208ENST00000560462 VTA1Q9NP79 307 aa7.8□□□□□ -1.16
HERC1-208ENST00000560462 FBXO40Q9UH90 709 aa7.8□□□□□ -1.16
HERC1-208ENST00000560462 NEUROG3Q9Y4Z2 214 aa7.8□□□□□ -1.16
HERC1-208ENST00000560462 COL12A1Q99715 3063 aa7.8□□□□□ -1.16
HERC1-208ENST00000560462 RBM47A0AV96 593 aaKnown RBP7.79□□□□□ -1.16
HERC1-208ENST00000560462 RSPH10B2B2RC85 870 aa7.79□□□□□ -1.16
HERC1-208ENST00000560462 PPFIA3O75145 1194 aa7.79□□□□□ -1.16
HERC1-208ENST00000560462 LRRN2O75325 713 aa7.79□□□□□ -1.16
HERC1-208ENST00000560462 WEE2P0C1S8 567 aa7.79□□□□□ -1.16
HERC1-208ENST00000560462 FBXO45P0C2W1 286 aa7.79□□□□□ -1.16
HERC1-208ENST00000560462 RSPH10BP0C881 870 aa7.79□□□□□ -1.16
HERC1-208ENST00000560462 SHMT1P34896 483 aa7.79□□□□□ -1.16
HERC1-208ENST00000560462 TRIM71Q2Q1W2 868 aaKnown RBP7.79□□□□□ -1.16
HERC1-208ENST00000560462 KMT5BQ4FZB7 885 aa7.79□□□□□ -1.16
HERC1-208ENST00000560462 ATG9AQ7Z3C6 839 aa7.79□□□□□ -1.16
HERC1-208ENST00000560462 LAPTM4BQ86VI4 370 aa7.79□□□□□ -1.16
HERC1-208ENST00000560462 CPXCR1Q8N123 301 aa7.79□□□□□ -1.16
HERC1-208ENST00000560462 TSPYL6Q8N831 410 aa7.79□□□□□ -1.16
HERC1-208ENST00000560462 C12orf50Q8NA57 414 aaPredicted RBP7.79□□□□□ -1.16
HERC1-208ENST00000560462 HNRNPLLQ8WVV9 542 aaKnown RBP7.79□□□□□ -1.16
HERC1-208ENST00000560462 UBL7Q96S82 380 aaPredicted RBP7.79□□□□□ -1.16
HERC1-208ENST00000560462 MYL10Q9BUA6 226 aa7.79□□□□□ -1.16
HERC1-208ENST00000560462 FAM126AQ9BYI3 521 aaPredicted RBP7.79□□□□□ -1.16
HERC1-208ENST00000560462 WDR11Q9BZH6 1224 aa7.79□□□□□ -1.16
HERC1-208ENST00000560462 FOXQ1Q9C009 403 aa7.79□□□□□ -1.16
HERC1-208ENST00000560462 BICC1Q9H694 974 aaKnown RBP7.79□□□□□ -1.16
HERC1-208ENST00000560462 ARHGEF10LQ9HCE6 1279 aa7.79□□□□□ -1.16
HERC1-208ENST00000560462 ARHGEF3Q9NR81 526 aa7.79□□□□□ -1.16
HERC1-208ENST00000560462 IFT57Q9NWB7 429 aa7.79□□□□□ -1.16
HERC1-208ENST00000560462 IGSF9Q9P2J2 1179 aa7.79□□□□□ -1.16
HERC1-208ENST00000560462 NOVA2Q9UNW9 492 aaKnown RBP7.79□□□□□ -1.16
HERC1-208ENST00000560462 TMX2Q9Y320 296 aa7.79□□□□□ -1.16
HERC1-208ENST00000560462 MRPL42Q9Y6G3 142 aaKnown RBP7.79□□□□□ -1.16
HERC1-208ENST00000560462 DDX49Q9Y6V7 483 aaKnown RBP7.79□□□□□ -1.16
HERC1-208ENST00000560462 PARP14Q460N5 1801 aa7.79□□□□□ -1.16
HERC1-208ENST00000560462 ITPR3Q14573 2671 aa7.79□□□□□ -1.16
HERC1-208ENST00000560462 EYA2O00167 538 aa7.78□□□□□ -1.16
HERC1-208ENST00000560462 GIPC1O14908 333 aa7.78□□□□□ -1.16
HERC1-208ENST00000560462 LZTS3O60299 673 aaPredicted RBP7.78□□□□□ -1.16
HERC1-208ENST00000560462 IGSF3O75054 1194 aa7.78□□□□□ -1.16
HERC1-208ENST00000560462 ARID4AP29374 1257 aaPredicted RBP7.78□□□□□ -1.16
HERC1-208ENST00000560462 RIPPLY3P57055 190 aa7.78□□□□□ -1.16
HERC1-208ENST00000560462 GNAI1P63096 354 aa7.78□□□□□ -1.16
HERC1-208ENST00000560462 UBE3AQ05086 875 aa7.78□□□□□ -1.16
HERC1-208ENST00000560462 NONOQ15233 471 aaKnown RBP eCLIP7.78□□□□□ -1.162e-6■■■□□ 15.3
HERC1-208ENST00000560462 RABL6Q3YEC7 729 aaPredicted RBP7.78□□□□□ -1.16
HERC1-208ENST00000560462 ATAT1Q5SQI0 421 aa7.78□□□□□ -1.16
HERC1-208ENST00000560462 PDE12Q6L8Q7 609 aaKnown RBP7.78□□□□□ -1.16
HERC1-208ENST00000560462 TSSK4Q6SA08 328 aa7.78□□□□□ -1.16
HERC1-208ENST00000560462 OTOP3Q7RTS5 596 aa7.78□□□□□ -1.16
HERC1-208ENST00000560462 CHST13Q8NET6 341 aa7.78□□□□□ -1.16
HERC1-208ENST00000560462 CASP10Q92851 521 aa7.78□□□□□ -1.16
HERC1-208ENST00000560462 WNT8BQ93098 351 aa7.78□□□□□ -1.16
HERC1-208ENST00000560462 ZNF689Q96CS4 500 aaPredicted RBP7.78□□□□□ -1.16
HERC1-208ENST00000560462 PURBQ96QR8 312 aaKnown RBP7.78□□□□□ -1.16
HERC1-208ENST00000560462 MKNK1Q9BUB5 465 aa7.78□□□□□ -1.16
HERC1-208ENST00000560462 GTF2IRD1Q9UHL9 959 aa7.78□□□□□ -1.16
HERC1-208ENST00000560462 FKBPLQ9UIM3 349 aa7.78□□□□□ -1.16
HERC1-208ENST00000560462 MSRB2Q9Y3D2 182 aa7.78□□□□□ -1.16
HERC1-208ENST00000560462 ENO4A6NNW6 628 aa7.77□□□□□ -1.17
HERC1-208ENST00000560462 ATP2A1O14983 1001 aa7.77□□□□□ -1.17
HERC1-208ENST00000560462 SRFP11831 508 aa7.77□□□□□ -1.17
HERC1-208ENST00000560462 MCCD1P59942 119 aaPredicted RBP7.77□□□□□ -1.17
HERC1-208ENST00000560462 PPP4CP60510 307 aa7.77□□□□□ -1.17
HERC1-208ENST00000560462 KCNC4Q03721 635 aa7.77□□□□□ -1.17
HERC1-208ENST00000560462 KIAA1841Q6NSI8 718 aa7.77□□□□□ -1.17
HERC1-208ENST00000560462 DCLRE1AQ6PJP8 1040 aa7.77□□□□□ -1.17
HERC1-208ENST00000560462 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.77□□□□□ -1.17
HERC1-208ENST00000560462 TTC6Q86TZ1 520 aa7.77□□□□□ -1.17
HERC1-208ENST00000560462 C7orf31Q8N865 590 aa7.77□□□□□ -1.17
HERC1-208ENST00000560462 GPR152Q8TDT2 470 aa7.77□□□□□ -1.17
HERC1-208ENST00000560462 APBB2Q92870 758 aa7.77□□□□□ -1.17
HERC1-208ENST00000560462 GPR20Q99678 358 aa7.77□□□□□ -1.17
HERC1-208ENST00000560462 SEPT9Q9UHD8 586 aaPredicted RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms