RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 CAGE1Q8TC20 777 aa15.76■□□□□ 0.11
PKNOX1-209ENST00000560448 ATP6V0A1Q93050 837 aa15.76■□□□□ 0.11
PKNOX1-209ENST00000560448 HDAC6Q9UBN7 1215 aa15.76■□□□□ 0.11
PKNOX1-209ENST00000560448 PCDHA12Q9UN75 941 aa15.76■□□□□ 0.11
PKNOX1-209ENST00000560448 CEP131Q9UPN4 1083 aa15.76■□□□□ 0.11
PKNOX1-209ENST00000560448 STK24Q9Y6E0 443 aa15.76■□□□□ 0.11
PKNOX1-209ENST00000560448 C17orf102A2RUQ5 167 aa15.75■□□□□ 0.11
PKNOX1-209ENST00000560448 KIF28PB7ZC32 967 aa15.75■□□□□ 0.11
PKNOX1-209ENST00000560448 DDX39AO00148 427 aaKnown RBP15.75■□□□□ 0.11
PKNOX1-209ENST00000560448 HBP1O60381 514 aa15.75■□□□□ 0.11
PKNOX1-209ENST00000560448 BMP15O95972 392 aa15.75■□□□□ 0.11
PKNOX1-209ENST00000560448 SMIM10L2AP0DMW4 78 aa15.75■□□□□ 0.11
PKNOX1-209ENST00000560448 SMIM10L2BP0DMW5 78 aa15.75■□□□□ 0.11
PKNOX1-209ENST00000560448 SYT1P21579 422 aa15.75■□□□□ 0.11
PKNOX1-209ENST00000560448 RBL2Q08999 1139 aa15.75■□□□□ 0.11
PKNOX1-209ENST00000560448 BFSP2Q13515 415 aa15.75■□□□□ 0.11
PKNOX1-209ENST00000560448 NEK9Q8TD19 979 aa15.75■□□□□ 0.11
PKNOX1-209ENST00000560448 HAS1Q92839 578 aa15.75■□□□□ 0.11
PKNOX1-209ENST00000560448 MTMR9Q96QG7 549 aa15.75■□□□□ 0.11
PKNOX1-209ENST00000560448 LBHD1Q9BQE6 289 aaPredicted RBP15.75■□□□□ 0.11
PKNOX1-209ENST00000560448 ZSCAN16Q9H4T2 348 aaPredicted RBP15.75■□□□□ 0.11
PKNOX1-209ENST00000560448 IGSF9BQ9UPX0 1349 aa15.75■□□□□ 0.11
PKNOX1-209ENST00000560448 COL1A2P08123 1366 aa15.75■□□□□ 0.11
PKNOX1-209ENST00000560448 TIMP1P01033 207 aa15.74■□□□□ 0.11
PKNOX1-209ENST00000560448 MCM7P33993 719 aa15.74■□□□□ 0.11
PKNOX1-209ENST00000560448 PTK7Q13308 1070 aa15.74■□□□□ 0.11
PKNOX1-209ENST00000560448 PTGISQ16647 500 aa15.74■□□□□ 0.11
PKNOX1-209ENST00000560448 TAF2Q6P1X5 1199 aa15.74■□□□□ 0.11
PKNOX1-209ENST00000560448 PDXDC2PQ6P474 469 aa15.74■□□□□ 0.11
PKNOX1-209ENST00000560448 MIER3Q7Z3K6 550 aa15.74■□□□□ 0.11
PKNOX1-209ENST00000560448 TRIM50Q86XT4 487 aa15.74■□□□□ 0.11
PKNOX1-209ENST00000560448 CCDC60Q8IWA6 550 aaPredicted RBP15.74■□□□□ 0.11
PKNOX1-209ENST00000560448 ATP8B4Q8TF62 1192 aa15.74■□□□□ 0.11
PKNOX1-209ENST00000560448 BBXQ8WY36 941 aaPredicted RBP15.74■□□□□ 0.11
PKNOX1-209ENST00000560448 PCYT2Q99447 389 aa15.74■□□□□ 0.11
PKNOX1-209ENST00000560448 RAB34Q9BZG1 259 aa15.74■□□□□ 0.11
PKNOX1-209ENST00000560448 UNC45AQ9H3U1 944 aa15.74■□□□□ 0.11
PKNOX1-209ENST00000560448 PRDM5Q9NQX1 630 aaPredicted RBP15.74■□□□□ 0.11
PKNOX1-209ENST00000560448 VAV3Q9UKW4 847 aa15.74■□□□□ 0.11
PKNOX1-209ENST00000560448 STX6O43752 255 aa15.73■□□□□ 0.11
PKNOX1-209ENST00000560448 OR52Z1P0C646 297 aa15.73■□□□□ 0.11
PKNOX1-209ENST00000560448 RAG1P15918 1043 aa15.73■□□□□ 0.11
PKNOX1-209ENST00000560448 PRPHP41219 470 aa15.73■□□□□ 0.11
PKNOX1-209ENST00000560448 PPFIA1Q13136 1202 aa15.73■□□□□ 0.11
PKNOX1-209ENST00000560448 TMEM266Q2M3C6 531 aa15.73■□□□□ 0.11
PKNOX1-209ENST00000560448 SWSAP1Q6NVH7 229 aa15.73■□□□□ 0.11
PKNOX1-209ENST00000560448 CLEC17AQ6ZS10 378 aa15.73■□□□□ 0.11
PKNOX1-209ENST00000560448 HIPK3Q9H422 1215 aa15.73■□□□□ 0.11
PKNOX1-209ENST00000560448 RNPEPQ9H4A4 650 aa15.73■□□□□ 0.11
PKNOX1-209ENST00000560448 TTC12Q9H892 705 aaPredicted RBP15.73■□□□□ 0.11
PKNOX1-209ENST00000560448 TRMT13Q9NUP7 481 aaKnown RBP15.73■□□□□ 0.11
PKNOX1-209ENST00000560448 PPME1Q9Y570 386 aa15.73■□□□□ 0.11
PKNOX1-209ENST00000560448 DNAH12Q6ZR08 3092 aa15.73■□□□□ 0.11
PKNOX1-209ENST00000560448 MYH9P35579 1960 aaKnown RBP15.72■□□□□ 0.11
PKNOX1-209ENST00000560448 POTEB3A0JP26 581 aa15.72■□□□□ 0.11
PKNOX1-209ENST00000560448 VPS37CA5D8V6 355 aaPredicted RBP15.72■□□□□ 0.11
PKNOX1-209ENST00000560448 H0YGN5 161 aa15.72■□□□□ 0.11
PKNOX1-209ENST00000560448 MCM4P33991 863 aa15.72■□□□□ 0.11
PKNOX1-209ENST00000560448 BMP8BP34820 402 aa15.72■□□□□ 0.11
PKNOX1-209ENST00000560448 CHMP4BP1P59074 171 aa15.72■□□□□ 0.11
PKNOX1-209ENST00000560448 PSMC5P62195 406 aa15.72■□□□□ 0.11
PKNOX1-209ENST00000560448 ADAM17P78536 824 aa15.72■□□□□ 0.11
PKNOX1-209ENST00000560448 NUCB2P80303 420 aa15.72■□□□□ 0.11
PKNOX1-209ENST00000560448 SPIRE1Q08AE8 756 aa15.72■□□□□ 0.11
PKNOX1-209ENST00000560448 EPHA7Q15375 998 aa15.72■□□□□ 0.11
PKNOX1-209ENST00000560448 ARL6IP4Q66PJ3 421 aaKnown RBP15.72■□□□□ 0.11
PKNOX1-209ENST00000560448 GDF6Q6KF10 455 aaPredicted RBP15.72■□□□□ 0.11
PKNOX1-209ENST00000560448 POTEBQ6S5H4 581 aa15.72■□□□□ 0.11
PKNOX1-209ENST00000560448 FAM43BQ6ZT52 329 aaPredicted RBP15.72■□□□□ 0.11
PKNOX1-209ENST00000560448 RPAINQ86UA6 219 aa15.72■□□□□ 0.11
PKNOX1-209ENST00000560448 SERINC5Q86VE9 423 aa15.72■□□□□ 0.11
PKNOX1-209ENST00000560448 ZNF710Q8N1W2 664 aa15.72■□□□□ 0.11
PKNOX1-209ENST00000560448 TMEM199Q8N511 208 aa15.72■□□□□ 0.11
PKNOX1-209ENST00000560448 TRPV6Q9H1D0 765 aa15.72■□□□□ 0.11
PKNOX1-209ENST00000560448 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.72■□□□□ 0.11
PKNOX1-209ENST00000560448 NRBP2Q9NSY0 501 aa15.72■□□□□ 0.11
PKNOX1-209ENST00000560448 TRPC6Q9Y210 931 aa15.72■□□□□ 0.11
PKNOX1-209ENST00000560448 KAT6AQ92794 2004 aa15.72■□□□□ 0.11
PKNOX1-209ENST00000560448 A0A1W2PPC1 479 aa15.71■□□□□ 0.11
PKNOX1-209ENST00000560448 MBLAC1A4D2B0 266 aaPredicted RBP15.71■□□□□ 0.11
PKNOX1-209ENST00000560448 TRIM43BA6NCK2 446 aa15.71■□□□□ 0.11
PKNOX1-209ENST00000560448 CHMP2AO43633 222 aa15.71■□□□□ 0.11
PKNOX1-209ENST00000560448 P4HBP07237 508 aaKnown RBP15.71■□□□□ 0.11
PKNOX1-209ENST00000560448 PFKMP08237 780 aa15.71■□□□□ 0.11
PKNOX1-209ENST00000560448 ATP2B1P20020 1258 aa15.71■□□□□ 0.11
PKNOX1-209ENST00000560448 MUTP22033 750 aa15.71■□□□□ 0.11
PKNOX1-209ENST00000560448 RFC2P35250 354 aa15.71■□□□□ 0.11
PKNOX1-209ENST00000560448 PLCB4Q15147 1175 aa15.71■□□□□ 0.11
PKNOX1-209ENST00000560448 GRIK4Q16099 956 aa15.71■□□□□ 0.11
PKNOX1-209ENST00000560448 ZNF484Q5JVG2 852 aa15.71■□□□□ 0.11
PKNOX1-209ENST00000560448 MFSD5Q6N075 450 aa15.71■□□□□ 0.11
PKNOX1-209ENST00000560448 CKAP2LQ8IYA6 745 aa15.71■□□□□ 0.11
PKNOX1-209ENST00000560448 RETREG2Q8NC44 543 aa15.71■□□□□ 0.11
PKNOX1-209ENST00000560448 ERMNQ8TAM6 284 aa15.71■□□□□ 0.11
PKNOX1-209ENST00000560448 TRIM43Q96BQ3 446 aaPredicted RBP15.71■□□□□ 0.11
PKNOX1-209ENST00000560448 NOC4LQ9BVI4 516 aaKnown RBP15.71■□□□□ 0.11
PKNOX1-209ENST00000560448 GABBR1Q9UBS5 961 aa15.71■□□□□ 0.11
PKNOX1-209ENST00000560448 TELO2Q9Y4R8 837 aa15.71■□□□□ 0.11
PKNOX1-209ENST00000560448 LTBP2Q14767 1821 aa15.71■□□□□ 0.11
PKNOX1-209ENST00000560448 MARK3P27448 753 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms