RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 PDE1BQ01064 536 aa14.56□□□□□ -0.08
TRAF3-208ENST00000560371 NOP9Q86U38 636 aaKnown RBP14.56□□□□□ -0.08
TRAF3-208ENST00000560371 MMP19Q99542 508 aa14.56□□□□□ -0.08
TRAF3-208ENST00000560371 RNF146Q9NTX7 359 aa14.56□□□□□ -0.08
TRAF3-208ENST00000560371 PRPSAP2O60256 369 aa14.55□□□□□ -0.08
TRAF3-208ENST00000560371 LRRC63Q05C16 580 aa14.55□□□□□ -0.08
TRAF3-208ENST00000560371 SH2D4BQ5SQS7 431 aa14.55□□□□□ -0.08
TRAF3-208ENST00000560371 OR6B3Q8NGW1 331 aa14.55□□□□□ -0.08
TRAF3-208ENST00000560371 HDAC11Q96DB2 347 aa14.55□□□□□ -0.08
TRAF3-208ENST00000560371 SFI1A8K8P3 1242 aa14.55□□□□□ -0.08
TRAF3-208ENST00000560371 F5H6K3 240 aa14.55□□□□□ -0.08
TRAF3-208ENST00000560371 KLRC3Q07444 240 aa14.55□□□□□ -0.08
TRAF3-208ENST00000560371 AIFM3Q96NN9 605 aa14.55□□□□□ -0.08
TRAF3-208ENST00000560371 TRPM1Q7Z4N2 1603 aa14.55□□□□□ -0.08
TRAF3-208ENST00000560371 PHKA2P46019 1235 aa14.55□□□□□ -0.08
TRAF3-208ENST00000560371 SLC44A5Q8NCS7 719 aa14.55□□□□□ -0.08
TRAF3-208ENST00000560371 TBC1D22BQ9NU19 505 aa14.55□□□□□ -0.08
TRAF3-208ENST00000560371 ACTN1P12814 892 aa14.55□□□□□ -0.08
TRAF3-208ENST00000560371 GANCQ8TET4 914 aa14.55□□□□□ -0.08
TRAF3-208ENST00000560371 MRFAP1L1Q96HT8 127 aa14.55□□□□□ -0.08
TRAF3-208ENST00000560371 MAN1B1Q9UKM7 699 aa14.55□□□□□ -0.08
TRAF3-208ENST00000560371 DPCR1Q3MIW9 517 aa14.55□□□□□ -0.08
TRAF3-208ENST00000560371 EPHB1P54762 984 aa14.55□□□□□ -0.08
TRAF3-208ENST00000560371 EPHA10Q5JZY3 1008 aa14.55□□□□□ -0.08
TRAF3-208ENST00000560371 FNDC3AQ9Y2H6 1198 aaKnown RBP14.55□□□□□ -0.08
TRAF3-208ENST00000560371 CDHR2Q9BYE9 1310 aa14.55□□□□□ -0.08
TRAF3-208ENST00000560371 BUB1BO60566 1050 aaPredicted RBP14.54□□□□□ -0.08
TRAF3-208ENST00000560371 RWDD2AQ9UIY3 292 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 ANGPTL3Q9Y5C1 460 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 CHRNA5P30532 468 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 OR6B2Q6IFH4 312 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 THNSL1Q8IYQ7 743 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 SUGT1Q9Y2Z0 365 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 GOLGA8IPA6NC78 632 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 GOLGA8JA6NMD2 632 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 NFKBIAP25963 317 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 SGO2Q562F6 1265 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 FAM133AQ8N9E0 248 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 DCP1AQ9NPI6 582 aaPredicted RBP14.54□□□□□ -0.08
TRAF3-208ENST00000560371 PPME1Q9Y570 386 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 A0A0G2JLW4 131 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 POC1B-GALNT4F8VUJ3 575 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 NECTIN1Q15223 517 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 TTC31Q49AM3 519 aaPredicted RBP14.54□□□□□ -0.08
TRAF3-208ENST00000560371 TMTC3Q6ZXV5 915 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 PSPC1Q8WXF1 523 aaKnown RBP14.54□□□□□ -0.08
TRAF3-208ENST00000560371 EFCC1Q9HA90 598 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 RCOR1Q9UKL0 485 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 SPDYE2BA6NHP3 402 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 USP17L15C9J2P7 530 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 USP17L13C9JLJ4 530 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 USP17L11C9JVI0 530 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 USP17L18D6R9N7 530 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 USP17L22D6RA61 530 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 USP17L17D6RBQ6 530 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 USP17L19D6RCP7 530 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 USP17L20D6RJB6 530 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 SPDYE6P0CI01 402 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 ETF1P62495 437 aaKnown RBP14.54□□□□□ -0.08
TRAF3-208ENST00000560371 DYNLT1P63172 113 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 USP17L24Q0WX57 530 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 ZNF667Q5HYK9 610 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 USP17L6PQ6QN14 398 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 URGCPQ8TCY9 931 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 ATP6V0A4Q9HBG4 840 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 PCK1P35558 622 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 C10orf76Q5T2E6 689 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 RAET1EQ8TD07 263 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 GPT2Q8TD30 523 aa14.54□□□□□ -0.08
TRAF3-208ENST00000560371 BNIP3LO60238 219 aa14.53□□□□□ -0.08
TRAF3-208ENST00000560371 IQCB1Q15051 598 aa14.53□□□□□ -0.08
TRAF3-208ENST00000560371 LLGL1Q15334 1064 aa14.53□□□□□ -0.08
TRAF3-208ENST00000560371 FAM71BQ8TC56 605 aa14.53□□□□□ -0.08
TRAF3-208ENST00000560371 ZNF568Q3ZCX4 644 aa14.53□□□□□ -0.08
TRAF3-208ENST00000560371 MYLK4Q86YV6 388 aaPredicted RBP14.53□□□□□ -0.08
TRAF3-208ENST00000560371 ELMOD1Q8N336 334 aa14.53□□□□□ -0.08
TRAF3-208ENST00000560371 ATP6V1E2Q96A05 226 aa14.53□□□□□ -0.08
TRAF3-208ENST00000560371 BAG5Q9UL15 447 aa14.53□□□□□ -0.08
TRAF3-208ENST00000560371 CPSF1Q10570 1443 aaKnown RBP14.53□□□□□ -0.08
TRAF3-208ENST00000560371 CERKQ8TCT0 537 aa14.53□□□□□ -0.08
TRAF3-208ENST00000560371 MAGED2Q9UNF1 606 aaPredicted RBP14.53□□□□□ -0.08
TRAF3-208ENST00000560371 ADGRB3O60242 1522 aa14.53□□□□□ -0.08
TRAF3-208ENST00000560371 CLGNO14967 610 aa14.53□□□□□ -0.08
TRAF3-208ENST00000560371 GUCY2DQ02846 1103 aa14.53□□□□□ -0.08
TRAF3-208ENST00000560371 BRD3Q15059 726 aa14.53□□□□□ -0.08
TRAF3-208ENST00000560371 IRAK4Q9NWZ3 460 aa14.53□□□□□ -0.08
TRAF3-208ENST00000560371 FDX1P10109 184 aa14.53□□□□□ -0.08
TRAF3-208ENST00000560371 KRT76Q01546 638 aa14.53□□□□□ -0.08
TRAF3-208ENST00000560371 CPP00450 1065 aa14.53□□□□□ -0.08
TRAF3-208ENST00000560371 NRKQ7Z2Y5 1582 aa14.53□□□□□ -0.08
TRAF3-208ENST00000560371 BANK1Q8NDB2 785 aa14.53□□□□□ -0.08
TRAF3-208ENST00000560371 UHMK1Q8TAS1 419 aaKnown RBP14.53□□□□□ -0.08
TRAF3-208ENST00000560371 PRELPP51888 382 aa14.52□□□□□ -0.08
TRAF3-208ENST00000560371 NKX1-1Q15270 411 aaPredicted RBP14.52□□□□□ -0.08
TRAF3-208ENST00000560371 CHMP6Q96FZ7 201 aa14.52□□□□□ -0.08
TRAF3-208ENST00000560371 TULP4Q9NRJ4 1543 aa14.52□□□□□ -0.08
TRAF3-208ENST00000560371 IGSF3O75054 1194 aa14.52□□□□□ -0.08
TRAF3-208ENST00000560371 INPP5BP32019 993 aa14.52□□□□□ -0.08
TRAF3-208ENST00000560371 DARS2Q6PI48 645 aaKnown RBP14.52□□□□□ -0.08
TRAF3-208ENST00000560371 ARHGEF18Q6ZSZ5 1173 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms