RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 LRSAM1Q6UWE0 723 aa7.2□□□□□ -1.26
SPG11-221ENST00000560299 SEPT14Q6ZU15 432 aa7.2□□□□□ -1.26
SPG11-221ENST00000560299 USP49Q70CQ1 688 aa7.2□□□□□ -1.26
SPG11-221ENST00000560299 SV2BQ7L1I2 683 aa7.2□□□□□ -1.26
SPG11-221ENST00000560299 SMAP1Q8IYB5 467 aaPredicted RBP7.2□□□□□ -1.26
SPG11-221ENST00000560299 SCFD2Q8WU76 684 aa7.2□□□□□ -1.26
SPG11-221ENST00000560299 ZFP91Q96JP5 570 aaPredicted RBP7.2□□□□□ -1.26
SPG11-221ENST00000560299 POLR3CQ9BUI4 534 aaPredicted RBP7.2□□□□□ -1.26
SPG11-221ENST00000560299 ARHGAP39Q9C0H5 1083 aa7.2□□□□□ -1.26
SPG11-221ENST00000560299 CRISPLD2Q9H0B8 497 aa7.2□□□□□ -1.26
SPG11-221ENST00000560299 TUFT1Q9NNX1 390 aa7.2□□□□□ -1.26
SPG11-221ENST00000560299 VTA1Q9NP79 307 aa7.2□□□□□ -1.26
SPG11-221ENST00000560299 KIAA1468Q9P260 1216 aa7.2□□□□□ -1.26
SPG11-221ENST00000560299 SERTAD1Q9UHV2 236 aa7.2□□□□□ -1.26
SPG11-221ENST00000560299 VAV3Q9UKW4 847 aa7.2□□□□□ -1.26
SPG11-221ENST00000560299 DNM3Q9UQ16 869 aa7.2□□□□□ -1.26
SPG11-221ENST00000560299 PTCH2Q9Y6C5 1203 aa7.2□□□□□ -1.26
SPG11-221ENST00000560299 KIAA1217Q5T5P2 1943 aa7.2□□□□□ -1.26
SPG11-221ENST00000560299 PP2D1A8MPX8 630 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 DDX39AO00148 427 aaKnown RBP7.19□□□□□ -1.26
SPG11-221ENST00000560299 CHMP2AO43633 222 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 ACTN4O43707 911 aaKnown RBP7.19□□□□□ -1.26
SPG11-221ENST00000560299 GTPBP6O43824 516 aaPredicted RBP7.19□□□□□ -1.26
SPG11-221ENST00000560299 COBLO75128 1261 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 PSAPP07602 524 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 PLCG1P19174 1290 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 AFMP43652 599 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 GJA8P48165 433 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 SPIRE1Q08AE8 756 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 GSE1Q14687 1217 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 POSTNQ15063 836 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 MIS18BP1Q6P0N0 1132 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 RBM43Q6ZSC3 357 aaKnown RBP7.19□□□□□ -1.26
SPG11-221ENST00000560299 ARMCX2Q7L311 632 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 CKAP2LQ8IYA6 745 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 SMARCE1Q969G3 411 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 GJA10Q969M2 543 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 PAGE5Q96GU1 130 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 MAML3Q96JK9 1138 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 CCDC43Q96MW1 224 aaKnown RBP7.19□□□□□ -1.26
SPG11-221ENST00000560299 GSDMAQ96QA5 445 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 NACC1Q96RE7 527 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 UIMC1Q96RL1 719 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 PLIN2Q99541 437 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 EIF2AK1Q9BQI3 630 aaKnown RBP7.19□□□□□ -1.26
SPG11-221ENST00000560299 SEZ6LQ9BYH1 1024 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 NAT10Q9H0A0 1025 aaKnown RBP7.19□□□□□ -1.26
SPG11-221ENST00000560299 UNC45AQ9H3U1 944 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 ABHD16BQ9H3Z7 469 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 TSPY26PQ9H489 355 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 ZSWIM4Q9H7M6 989 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 MLXIPQ9HAP2 919 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 JPH1Q9HDC5 661 aaPredicted RBP7.19□□□□□ -1.26
SPG11-221ENST00000560299 RMND1Q9NWS8 449 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 PKD2L1Q9P0L9 805 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 SLC9A2Q9UBY0 812 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 KIAA1024Q9UPX6 916 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 PCDHA10Q9Y5I2 948 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 PLXNA1Q9UIW2 1896 aa7.19□□□□□ -1.26
SPG11-221ENST00000560299 A0A087X0B3 334 aa7.18□□□□□ -1.26
SPG11-221ENST00000560299 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.18□□□□□ -1.26
SPG11-221ENST00000560299 NOP56O00567 594 aaKnown RBP7.18□□□□□ -1.26
SPG11-221ENST00000560299 NKRFO15226 690 aaKnown RBP eCLIP7.18□□□□□ -1.26
SPG11-221ENST00000560299 DHX15O43143 795 aaKnown RBP7.18□□□□□ -1.26
SPG11-221ENST00000560299 ATP9AO75110 1047 aa7.18□□□□□ -1.26
SPG11-221ENST00000560299 RGS20O76081 388 aa7.18□□□□□ -1.26
SPG11-221ENST00000560299 TXNP10599 105 aaKnown RBP7.18□□□□□ -1.26
SPG11-221ENST00000560299 XRCC6P12956 609 aaKnown RBP eCLIP7.18□□□□□ -1.26
SPG11-221ENST00000560299 KCNA2P16389 499 aa7.18□□□□□ -1.26
SPG11-221ENST00000560299 QARSP47897 775 aaKnown RBP7.18□□□□□ -1.26
SPG11-221ENST00000560299 PSMC5P62195 406 aa7.18□□□□□ -1.26
SPG11-221ENST00000560299 GRB10Q13322 594 aa7.18□□□□□ -1.26
SPG11-221ENST00000560299 ITGB3BPQ13352 177 aaPredicted RBP7.18□□□□□ -1.26
SPG11-221ENST00000560299 E2F4Q16254 413 aa7.18□□□□□ -1.26
SPG11-221ENST00000560299 STX1AQ16623 288 aa7.18□□□□□ -1.26
SPG11-221ENST00000560299 TMEM119Q4V9L6 283 aa7.18□□□□□ -1.26
SPG11-221ENST00000560299 MFSD14CQ5VZR4 134 aa7.18□□□□□ -1.26
SPG11-221ENST00000560299 FAM160B1Q5W0V3 765 aa7.18□□□□□ -1.26
SPG11-221ENST00000560299 IQSEC1Q6DN90 963 aa7.18□□□□□ -1.26
SPG11-221ENST00000560299 PDXDC2PQ6P474 469 aa7.18□□□□□ -1.26
SPG11-221ENST00000560299 OTUD6AQ7L8S5 288 aa7.18□□□□□ -1.26
SPG11-221ENST00000560299 EEPD1Q7L9B9 569 aa7.18□□□□□ -1.26
SPG11-221ENST00000560299 UBE2Q1Q7Z7E8 422 aa7.18□□□□□ -1.26
SPG11-221ENST00000560299 CATSPER3Q86XQ3 398 aa7.18□□□□□ -1.26
SPG11-221ENST00000560299 TPH2Q8IWU9 490 aa7.18□□□□□ -1.26
SPG11-221ENST00000560299 DHX37Q8IY37 1157 aaKnown RBP7.18□□□□□ -1.26
SPG11-221ENST00000560299 TRIML1Q8N9V2 468 aa7.18□□□□□ -1.26
SPG11-221ENST00000560299 LARP4BQ92615 738 aaKnown RBP7.18□□□□□ -1.26
SPG11-221ENST00000560299 RAD54LQ92698 747 aa7.18□□□□□ -1.26
SPG11-221ENST00000560299 ATP6V0A1Q93050 837 aa7.18□□□□□ -1.26
SPG11-221ENST00000560299 HSD17B14Q9BPX1 270 aa7.18□□□□□ -1.26
SPG11-221ENST00000560299 TINF2Q9BSI4 451 aa7.18□□□□□ -1.26
SPG11-221ENST00000560299 MMTAG2Q9BU76 263 aaKnown RBP7.18□□□□□ -1.26
SPG11-221ENST00000560299 HMX1Q9NP08 348 aaPredicted RBP7.18□□□□□ -1.26
SPG11-221ENST00000560299 KBTBD4Q9NVX7 518 aa7.18□□□□□ -1.26
SPG11-221ENST00000560299 ANO10Q9NW15 660 aa7.18□□□□□ -1.26
SPG11-221ENST00000560299 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.18□□□□□ -1.26
SPG11-221ENST00000560299 DACH1Q9UI36 760 aa7.18□□□□□ -1.26
SPG11-221ENST00000560299 GABRQQ9UN88 632 aa7.18□□□□□ -1.26
SPG11-221ENST00000560299 Q9Y3F1 56 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms