RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 PRKD1Q15139 912 aaPredicted RBP5.52□□□□□ -1.53
LRRC28-218ENST00000560236 CD276Q5ZPR3 534 aa5.52□□□□□ -1.53
LRRC28-218ENST00000560236 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.52□□□□□ -1.53
LRRC28-218ENST00000560236 REXO1L1PQ8IX06 675 aa5.52□□□□□ -1.53
LRRC28-218ENST00000560236 GIMAP8Q8ND71 665 aaPredicted RBP5.52□□□□□ -1.53
LRRC28-218ENST00000560236 MENTQ9BUN1 341 aa5.52□□□□□ -1.53
LRRC28-218ENST00000560236 ZNF341Q9BYN7 854 aa5.52□□□□□ -1.53
LRRC28-218ENST00000560236 PDGFDQ9GZP0 370 aaPredicted RBP5.52□□□□□ -1.53
LRRC28-218ENST00000560236 PCED1AQ9H1Q7 454 aa5.52□□□□□ -1.53
LRRC28-218ENST00000560236 ST7Q9NRC1 585 aa5.52□□□□□ -1.53
LRRC28-218ENST00000560236 KCND1Q9NSA2 647 aa5.52□□□□□ -1.53
LRRC28-218ENST00000560236 DSEQ9UL01 958 aa5.52□□□□□ -1.53
LRRC28-218ENST00000560236 WDR97A6NE52 1622 aa5.52□□□□□ -1.53
LRRC28-218ENST00000560236 NKRFO15226 690 aaKnown RBP eCLIP5.51□□□□□ -1.53
LRRC28-218ENST00000560236 KCNT2Q6UVM3 1135 aa5.51□□□□□ -1.53
LRRC28-218ENST00000560236 AARSD1Q9BTE6 412 aaKnown RBP5.51□□□□□ -1.53
LRRC28-218ENST00000560236 KATNBL1Q9H079 304 aa5.51□□□□□ -1.53
LRRC28-218ENST00000560236 SLITRK6Q9H5Y7 841 aa5.51□□□□□ -1.53
LRRC28-218ENST00000560236 ZFR2Q9UPR6 939 aaKnown RBP5.51□□□□□ -1.53
LRRC28-218ENST00000560236 TELO2Q9Y4R8 837 aa5.51□□□□□ -1.53
LRRC28-218ENST00000560236 TARBP1Q13395 1621 aaKnown RBP5.51□□□□□ -1.53
LRRC28-218ENST00000560236 GAPVD1Q14C86 1478 aa5.51□□□□□ -1.53
LRRC28-218ENST00000560236 ZNF839A8K0R7 811 aa5.5□□□□□ -1.53
LRRC28-218ENST00000560236 PRODHO43272 600 aa5.5□□□□□ -1.53
LRRC28-218ENST00000560236 FGRP09769 529 aa5.5□□□□□ -1.53
LRRC28-218ENST00000560236 KLF10Q13118 480 aa5.5□□□□□ -1.53
LRRC28-218ENST00000560236 USP10Q14694 798 aaKnown RBP5.5□□□□□ -1.53
LRRC28-218ENST00000560236 ZNF568Q3ZCX4 644 aa5.5□□□□□ -1.53
LRRC28-218ENST00000560236 HABP4Q5JVS0 413 aaKnown RBP5.5□□□□□ -1.53
LRRC28-218ENST00000560236 TAX1BP1Q86VP1 789 aa5.5□□□□□ -1.53
LRRC28-218ENST00000560236 CELF2-AS1Q8N7Q2 184 aa5.5□□□□□ -1.53
LRRC28-218ENST00000560236 NEIL1Q96FI4 390 aaPredicted RBP5.5□□□□□ -1.53
LRRC28-218ENST00000560236 SGSM3Q96HU1 749 aa5.5□□□□□ -1.53
LRRC28-218ENST00000560236 ADOQ96SZ5 270 aa5.5□□□□□ -1.53
LRRC28-218ENST00000560236 ZFYVE21Q9BQ24 234 aa5.5□□□□□ -1.53
LRRC28-218ENST00000560236 TACO1Q9BSH4 297 aaKnown RBP5.5□□□□□ -1.53
LRRC28-218ENST00000560236 TOPBP1Q92547 1522 aa5.49□□□□□ -1.53
LRRC28-218ENST00000560236 IQCA1LA6NCM1 817 aa5.49□□□□□ -1.53
LRRC28-218ENST00000560236 IL18BPO95998 194 aa5.49□□□□□ -1.53
LRRC28-218ENST00000560236 ZNF888P0CJ79 500 aaPredicted RBP5.49□□□□□ -1.53
LRRC28-218ENST00000560236 EPHA5P54756 1037 aa5.49□□□□□ -1.53
LRRC28-218ENST00000560236 GPR85P60893 370 aa5.49□□□□□ -1.53
LRRC28-218ENST00000560236 ARID5AQ03989 594 aa5.49□□□□□ -1.53
LRRC28-218ENST00000560236 KCTD1Q719H9 257 aa5.49□□□□□ -1.53
LRRC28-218ENST00000560236 IFNL3Q8IZI9 196 aa5.49□□□□□ -1.53
LRRC28-218ENST00000560236 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.49□□□□□ -1.53
LRRC28-218ENST00000560236 CARD11Q9BXL7 1154 aa5.49□□□□□ -1.53
LRRC28-218ENST00000560236 PTPN22Q9Y2R2 807 aa5.49□□□□□ -1.53
LRRC28-218ENST00000560236 LMTK3Q96Q04 1460 aa5.49□□□□□ -1.53
LRRC28-218ENST00000560236 WIZO95785 1651 aa5.49□□□□□ -1.53
LRRC28-218ENST00000560236 KDM6BO15054 1643 aa5.48□□□□□ -1.53
LRRC28-218ENST00000560236 HECW2Q9P2P5 1572 aa5.48□□□□□ -1.53
LRRC28-218ENST00000560236 FAM47E-STBD1D6RA91 191 aa5.48□□□□□ -1.53
LRRC28-218ENST00000560236 SOD2P04179 222 aa5.48□□□□□ -1.53
LRRC28-218ENST00000560236 FGFR1P11362 822 aa5.48□□□□□ -1.53
LRRC28-218ENST00000560236 PABPC1P11940 636 aaKnown RBP5.48□□□□□ -1.53
LRRC28-218ENST00000560236 RAC3P60763 192 aa5.48□□□□□ -1.53
LRRC28-218ENST00000560236 FOXE3Q13461 319 aa5.48□□□□□ -1.53
LRRC28-218ENST00000560236 NTRK3Q16288 839 aa5.48□□□□□ -1.53
LRRC28-218ENST00000560236 DDR2Q16832 855 aa5.48□□□□□ -1.53
LRRC28-218ENST00000560236 NRN1LQ496H8 165 aa5.48□□□□□ -1.53
LRRC28-218ENST00000560236 CRB2Q5IJ48 1285 aa5.48□□□□□ -1.53
LRRC28-218ENST00000560236 STYK1Q6J9G0 422 aa5.48□□□□□ -1.53
LRRC28-218ENST00000560236 NSMFQ6X4W1 530 aa5.48□□□□□ -1.53
LRRC28-218ENST00000560236 HNRNPLLQ8WVV9 542 aaKnown RBP5.48□□□□□ -1.53
LRRC28-218ENST00000560236 OSBP2Q969R2 916 aa5.48□□□□□ -1.53
LRRC28-218ENST00000560236 ARHGEF4Q9NR80 690 aa5.48□□□□□ -1.53
LRRC28-218ENST00000560236 ING1Q9UK53 422 aaPredicted RBP5.48□□□□□ -1.53
LRRC28-218ENST00000560236 DNMBPQ6XZF7 1577 aa5.47□□□□□ -1.53
LRRC28-218ENST00000560236 AQRO60306 1485 aaKnown RBP eCLIP5.47□□□□□ -1.53
LRRC28-218ENST00000560236 ESYT3A0FGR9 886 aa5.47□□□□□ -1.53
LRRC28-218ENST00000560236 BLACEA4D250 179 aa5.47□□□□□ -1.53
LRRC28-218ENST00000560236 NPIPB8E9PQR5 432 aa5.47□□□□□ -1.53
LRRC28-218ENST00000560236 ACOT7O00154 380 aa5.47□□□□□ -1.53
LRRC28-218ENST00000560236 COMTP21964 271 aa5.47□□□□□ -1.53
LRRC28-218ENST00000560236 POLD1P28340 1107 aa5.47□□□□□ -1.53
LRRC28-218ENST00000560236 RNF207Q6ZRF8 634 aa5.47□□□□□ -1.53
LRRC28-218ENST00000560236 MCF2L2Q86YR7 1114 aa5.47□□□□□ -1.53
LRRC28-218ENST00000560236 ALG1Q9BT22 464 aa5.47□□□□□ -1.53
LRRC28-218ENST00000560236 CD244Q9BZW8 370 aa5.47□□□□□ -1.53
LRRC28-218ENST00000560236 IPPKQ9H8X2 491 aa5.47□□□□□ -1.53
LRRC28-218ENST00000560236 SLC39A2Q9NP94 309 aa5.47□□□□□ -1.53
LRRC28-218ENST00000560236 CUTAO60888 179 aa5.46□□□□□ -1.54
LRRC28-218ENST00000560236 DBPQ10586 325 aaPredicted RBP5.46□□□□□ -1.54
LRRC28-218ENST00000560236 IFRD2Q12894 506 aaPredicted RBP5.46□□□□□ -1.54
LRRC28-218ENST00000560236 USP39Q53GS9 565 aaKnown RBP5.46□□□□□ -1.54
LRRC28-218ENST00000560236 DPP8Q6V1X1 898 aaPredicted RBP5.46□□□□□ -1.54
LRRC28-218ENST00000560236 ANKS3Q6ZW76 656 aa5.46□□□□□ -1.54
LRRC28-218ENST00000560236 DPH6Q7L8W6 267 aa5.46□□□□□ -1.54
LRRC28-218ENST00000560236 FUKQ8N0W3 1084 aa5.46□□□□□ -1.54
LRRC28-218ENST00000560236 EDAQ92838 391 aa5.46□□□□□ -1.54
LRRC28-218ENST00000560236 MAGI1Q96QZ7 1491 aaPredicted RBP5.45□□□□□ -1.54
LRRC28-218ENST00000560236 TRAV20A0A0B4J274 112 aa5.45□□□□□ -1.54
LRRC28-218ENST00000560236 RAD17O75943 681 aa5.45□□□□□ -1.54
LRRC28-218ENST00000560236 CR2P20023 1033 aa5.45□□□□□ -1.54
LRRC28-218ENST00000560236 TOP3AQ13472 1001 aaPredicted RBP5.45□□□□□ -1.54
LRRC28-218ENST00000560236 FHL2Q14192 279 aa5.45□□□□□ -1.54
LRRC28-218ENST00000560236 RNF151Q2KHN1 245 aa5.45□□□□□ -1.54
LRRC28-218ENST00000560236 MIIPQ5JXC2 388 aa5.45□□□□□ -1.54
LRRC28-218ENST00000560236 AGBL4Q5VU57 503 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms