RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 SPDYE3A6NKU9 549 aa11.06□□□□□ -0.64
LRRC28-216ENST00000559819 EML1O00423 815 aa11.06□□□□□ -0.64
LRRC28-216ENST00000559819 CETN3O15182 167 aa11.06□□□□□ -0.64
LRRC28-216ENST00000559819 PALMO75781 387 aa11.06□□□□□ -0.64
LRRC28-216ENST00000559819 GNA14O95837 355 aa11.06□□□□□ -0.64
LRRC28-216ENST00000559819 FAM228BP0C875 321 aa11.06□□□□□ -0.64
LRRC28-216ENST00000559819 MCM3P25205 808 aa11.06□□□□□ -0.64
LRRC28-216ENST00000559819 KLRC1P26715 233 aa11.06□□□□□ -0.64
LRRC28-216ENST00000559819 POLD1P28340 1107 aa11.06□□□□□ -0.64
LRRC28-216ENST00000559819 EPS15P42566 896 aa11.06□□□□□ -0.64
LRRC28-216ENST00000559819 MARSP56192 900 aaKnown RBP11.06□□□□□ -0.64
LRRC28-216ENST00000559819 MAP9Q49MG5 647 aa11.06□□□□□ -0.64
LRRC28-216ENST00000559819 CCDC181Q5TID7 509 aa11.06□□□□□ -0.64
LRRC28-216ENST00000559819 HAUS3Q68CZ6 603 aa11.06□□□□□ -0.64
LRRC28-216ENST00000559819 TMEM179Q6ZVK1 233 aa11.06□□□□□ -0.64
LRRC28-216ENST00000559819 ZC3H3Q8IXZ2 948 aaKnown RBP11.06□□□□□ -0.64
LRRC28-216ENST00000559819 RUSC1Q9BVN2 902 aa11.06□□□□□ -0.64
LRRC28-216ENST00000559819 GLT8D2Q9H1C3 349 aa11.06□□□□□ -0.64
LRRC28-216ENST00000559819 FAM204AQ9H8W3 233 aa11.06□□□□□ -0.64
LRRC28-216ENST00000559819 PSD3Q9NYI0 1048 aa11.06□□□□□ -0.64
LRRC28-216ENST00000559819 RGL1Q9NZL6 768 aa11.06□□□□□ -0.64
LRRC28-216ENST00000559819 A0A0U1RQG5 324 aaPredicted RBP11.05□□□□□ -0.64
LRRC28-216ENST00000559819 SFI1A8K8P3 1242 aa11.05□□□□□ -0.64
LRRC28-216ENST00000559819 RBAK-RBAKDNI3L0D1 243 aa11.05□□□□□ -0.64
LRRC28-216ENST00000559819 GGCXP38435 758 aa11.05□□□□□ -0.64
LRRC28-216ENST00000559819 KCNA1Q09470 495 aa11.05□□□□□ -0.64
LRRC28-216ENST00000559819 ZSCAN26Q16670 478 aa11.05□□□□□ -0.64
LRRC28-216ENST00000559819 AOC3Q16853 763 aa11.05□□□□□ -0.64
LRRC28-216ENST00000559819 Q4G0T1 1027 aa11.05□□□□□ -0.64
LRRC28-216ENST00000559819 STRIP1Q5VSL9 837 aa11.05□□□□□ -0.64
LRRC28-216ENST00000559819 IQCEQ6IPM2 695 aa11.05□□□□□ -0.64
LRRC28-216ENST00000559819 ACBD3Q9H3P7 528 aa11.05□□□□□ -0.64
LRRC28-216ENST00000559819 RBM12Q9NTZ6 932 aaKnown RBP11.05□□□□□ -0.64
LRRC28-216ENST00000559819 DNM3Q9UQ16 869 aa11.05□□□□□ -0.64
LRRC28-216ENST00000559819 SCN9AQ15858 1988 aa11.05□□□□□ -0.64
LRRC28-216ENST00000559819 CLIC2O15247 247 aa11.05□□□□□ -0.64
LRRC28-216ENST00000559819 BMP3P12645 472 aa11.05□□□□□ -0.64
LRRC28-216ENST00000559819 TCP1P17987 556 aaKnown RBP11.05□□□□□ -0.64
LRRC28-216ENST00000559819 HOXA7P31268 230 aaPredicted RBP11.05□□□□□ -0.64
LRRC28-216ENST00000559819 SREBF1P36956 1147 aa11.05□□□□□ -0.64
LRRC28-216ENST00000559819 CASP4P49662 377 aa11.05□□□□□ -0.64
LRRC28-216ENST00000559819 UBXN2AP68543 259 aa11.05□□□□□ -0.64
LRRC28-216ENST00000559819 KLHL30Q0D2K2 578 aa11.05□□□□□ -0.64
LRRC28-216ENST00000559819 ASIC2Q16515 512 aa11.05□□□□□ -0.64
LRRC28-216ENST00000559819 DCAF17Q5H9S7 520 aaPredicted RBP11.05□□□□□ -0.64
LRRC28-216ENST00000559819 KIAA1755Q5JYT7 1200 aa11.05□□□□□ -0.64
LRRC28-216ENST00000559819 TAF3Q5VWG9 929 aa11.05□□□□□ -0.64
LRRC28-216ENST00000559819 MOXD1Q6UVY6 613 aa11.05□□□□□ -0.64
LRRC28-216ENST00000559819 SND1Q7KZF4 910 aaKnown RBP eCLIP11.05□□□□□ -0.64
LRRC28-216ENST00000559819 ZNF572Q7Z3I7 529 aaPredicted RBP11.05□□□□□ -0.64
LRRC28-216ENST00000559819 SYT2Q8N9I0 419 aaPredicted RBP11.05□□□□□ -0.64
LRRC28-216ENST00000559819 ERMNQ8TAM6 284 aa11.05□□□□□ -0.64
LRRC28-216ENST00000559819 AENQ8WTP8 325 aaKnown RBP11.05□□□□□ -0.64
LRRC28-216ENST00000559819 AKT1S1Q96B36 256 aa11.05□□□□□ -0.64
LRRC28-216ENST00000559819 BHMT2Q9H2M3 363 aa11.05□□□□□ -0.64
LRRC28-216ENST00000559819 VIPAS39Q9H9C1 493 aa11.05□□□□□ -0.64
LRRC28-216ENST00000559819 ADAMTS1Q9UHI8 967 aa11.05□□□□□ -0.64
LRRC28-216ENST00000559819 AJAP1Q9UKB5 411 aaPredicted RBP11.05□□□□□ -0.64
LRRC28-216ENST00000559819 VAV3Q9UKW4 847 aa11.05□□□□□ -0.64
LRRC28-216ENST00000559819 PITPNM2Q9BZ72 1349 aa11.04□□□□□ -0.64
LRRC28-216ENST00000559819 MYH10P35580 1976 aa11.04□□□□□ -0.64
LRRC28-216ENST00000559819 AGPSO00116 658 aa11.04□□□□□ -0.64
LRRC28-216ENST00000559819 PRLRP16471 622 aa11.04□□□□□ -0.64
LRRC28-216ENST00000559819 CAPN2P17655 700 aa11.04□□□□□ -0.64
LRRC28-216ENST00000559819 RPA1P27694 616 aa11.04□□□□□ -0.64
LRRC28-216ENST00000559819 CHRNA5P30532 468 aa11.04□□□□□ -0.64
LRRC28-216ENST00000559819 ZNF76P36508 570 aa11.04□□□□□ -0.64
LRRC28-216ENST00000559819 ECE1P42892 770 aa11.04□□□□□ -0.64
LRRC28-216ENST00000559819 AARSP49588 968 aaKnown RBP eCLIP11.04□□□□□ -0.64
LRRC28-216ENST00000559819 RNASE9P60153 205 aaKnown RBP11.04□□□□□ -0.64
LRRC28-216ENST00000559819 CTTNQ14247 550 aaKnown RBP11.04□□□□□ -0.64
LRRC28-216ENST00000559819 PTPROQ16827 1216 aa11.04□□□□□ -0.64
LRRC28-216ENST00000559819 DPY19L2P1Q6NXN4 242 aa11.04□□□□□ -0.64
LRRC28-216ENST00000559819 PIGOQ8TEQ8 1089 aa11.04□□□□□ -0.64
LRRC28-216ENST00000559819 MED4Q9NPJ6 270 aa11.04□□□□□ -0.64
LRRC28-216ENST00000559819 ZBTB39O15060 712 aa11.04□□□□□ -0.64
LRRC28-216ENST00000559819 CHMP2AO43633 222 aa11.04□□□□□ -0.64
LRRC28-216ENST00000559819 AKAP3O75969 853 aa11.04□□□□□ -0.64
LRRC28-216ENST00000559819 SLC18A3Q16572 532 aa11.04□□□□□ -0.64
LRRC28-216ENST00000559819 KNOP1Q1ED39 458 aaKnown RBP11.04□□□□□ -0.64
LRRC28-216ENST00000559819 EDRF1Q3B7T1 1238 aa11.04□□□□□ -0.64
LRRC28-216ENST00000559819 FOXR1Q6PIV2 292 aa11.04□□□□□ -0.64
LRRC28-216ENST00000559819 SAMD1Q6SPF0 538 aaPredicted RBP11.04□□□□□ -0.64
LRRC28-216ENST00000559819 EPM2AIP1Q7L775 607 aaPredicted RBP11.04□□□□□ -0.64
LRRC28-216ENST00000559819 GMCL1P1Q8NEA9 526 aa11.04□□□□□ -0.64
LRRC28-216ENST00000559819 SYN2Q92777 582 aaPredicted RBP11.04□□□□□ -0.64
LRRC28-216ENST00000559819 GMCL1Q96IK5 515 aa11.04□□□□□ -0.64
LRRC28-216ENST00000559819 PRMT6Q96LA8 375 aaPredicted RBP11.04□□□□□ -0.64
LRRC28-216ENST00000559819 EIF2AK1Q9BQI3 630 aaKnown RBP11.04□□□□□ -0.64
LRRC28-216ENST00000559819 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.04□□□□□ -0.64
LRRC28-216ENST00000559819 FAM184BQ9ULE4 1060 aa11.04□□□□□ -0.64
LRRC28-216ENST00000559819 PRR12Q9ULL5 1215 aa11.04□□□□□ -0.64
LRRC28-216ENST00000559819 GOLGB1Q14789 3259 aaKnown RBP11.03□□□□□ -0.64
LRRC28-216ENST00000559819 FAM170AA1A519 330 aa11.03□□□□□ -0.64
LRRC28-216ENST00000559819 GCNT3O95395 438 aa11.03□□□□□ -0.64
LRRC28-216ENST00000559819 NAB2Q15742 525 aa11.03□□□□□ -0.64
LRRC28-216ENST00000559819 RBM26Q5T8P6 1007 aaKnown RBP11.03□□□□□ -0.64
LRRC28-216ENST00000559819 TCERG1LQ5VWI1 586 aa11.03□□□□□ -0.64
LRRC28-216ENST00000559819 CCDC70Q6NSX1 233 aa11.03□□□□□ -0.64
LRRC28-216ENST00000559819 GJB7Q6PEY0 223 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms