RNA–Protein interactions for RNA: ENST00000559774.6

LRRC28-215, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-215ENST00000559774 DDX39AO00148 427 aaKnown RBP9.75□□□□□ -0.85
LRRC28-215ENST00000559774 LGALS2P05162 132 aa9.75□□□□□ -0.85
LRRC28-215ENST00000559774 ASGR1P07306 291 aa9.75□□□□□ -0.85
LRRC28-215ENST00000559774 NCLP19338 710 aaKnown RBP9.75□□□□□ -0.85
LRRC28-215ENST00000559774 MARCKSP29966 332 aaPredicted RBP9.75□□□□□ -0.85
LRRC28-215ENST00000559774 TXLNAP40222 546 aa9.75□□□□□ -0.85
LRRC28-215ENST00000559774 QARSP47897 775 aaKnown RBP9.75□□□□□ -0.85
LRRC28-215ENST00000559774 ME1P48163 572 aa9.75□□□□□ -0.85
LRRC28-215ENST00000559774 ACLYP53396 1101 aa9.75□□□□□ -0.85
LRRC28-215ENST00000559774 PTPN11Q06124 597 aaPredicted RBP9.75□□□□□ -0.85
LRRC28-215ENST00000559774 KCNA10Q16322 511 aa9.75□□□□□ -0.85
LRRC28-215ENST00000559774 IL17AQ16552 155 aa9.75□□□□□ -0.85
LRRC28-215ENST00000559774 HYIQ5T013 277 aa9.75□□□□□ -0.85
LRRC28-215ENST00000559774 AXDND1Q5T1B0 1012 aaPredicted RBP9.75□□□□□ -0.85
LRRC28-215ENST00000559774 SWSAP1Q6NVH7 229 aa9.75□□□□□ -0.85
LRRC28-215ENST00000559774 C4orf19Q8IY42 314 aa9.75□□□□□ -0.85
LRRC28-215ENST00000559774 EXOC8Q8IYI6 725 aa9.75□□□□□ -0.85
LRRC28-215ENST00000559774 TMEM87AQ8NBN3 555 aa9.75□□□□□ -0.85
LRRC28-215ENST00000559774 GLT1D1Q96MS3 346 aa9.75□□□□□ -0.85
LRRC28-215ENST00000559774 GBP4Q96PP9 640 aa9.75□□□□□ -0.85
LRRC28-215ENST00000559774 EIF2AK1Q9BQI3 630 aaKnown RBP9.75□□□□□ -0.85
LRRC28-215ENST00000559774 PYM1Q9BRP8 204 aaKnown RBP9.75□□□□□ -0.85
LRRC28-215ENST00000559774 FTOQ9C0B1 505 aaKnown RBP eCLIP9.75□□□□□ -0.85
LRRC28-215ENST00000559774 CCSER1Q9C0I3 900 aa9.75□□□□□ -0.85
LRRC28-215ENST00000559774 TUT1Q9H6E5 874 aaKnown RBP9.75□□□□□ -0.85
LRRC28-215ENST00000559774 ZNF302Q9NR11 478 aa9.75□□□□□ -0.85
LRRC28-215ENST00000559774 IGSF9BQ9UPX0 1349 aa9.75□□□□□ -0.85
LRRC28-215ENST00000559774 KDM3AQ9Y4C1 1321 aa9.75□□□□□ -0.85
LRRC28-215ENST00000559774 CENPFP49454 3210 aa9.75□□□□□ -0.85
LRRC28-215ENST00000559774 A0A1W2PQ27 194 aa9.74□□□□□ -0.85
LRRC28-215ENST00000559774 A0A1W2PQ64 194 aa9.74□□□□□ -0.85
LRRC28-215ENST00000559774 A0A1W2PQD8 194 aa9.74□□□□□ -0.85
LRRC28-215ENST00000559774 POTEMA6NI47 508 aa9.74□□□□□ -0.85
LRRC28-215ENST00000559774 HAS3O00219 553 aa9.74□□□□□ -0.85
LRRC28-215ENST00000559774 EML1O00423 815 aa9.74□□□□□ -0.85
LRRC28-215ENST00000559774 BACH1O14867 736 aa9.74□□□□□ -0.85
LRRC28-215ENST00000559774 SLITRK3O94933 977 aa9.74□□□□□ -0.85
LRRC28-215ENST00000559774 CMA1P23946 247 aa9.74□□□□□ -0.85
LRRC28-215ENST00000559774 UBA7P41226 1012 aa9.74□□□□□ -0.85
LRRC28-215ENST00000559774 FOXD4L6Q3SYB3 417 aaPredicted RBP9.74□□□□□ -0.85
LRRC28-215ENST00000559774 XKR3Q5GH77 459 aa9.74□□□□□ -0.85
LRRC28-215ENST00000559774 C1orf53Q5VUE5 145 aa9.74□□□□□ -0.85
LRRC28-215ENST00000559774 NCAPH2Q6IBW4 605 aa9.74□□□□□ -0.85
LRRC28-215ENST00000559774 NFRKBQ6P4R8 1299 aa9.74□□□□□ -0.85
LRRC28-215ENST00000559774 FOXD4L3Q6VB84 417 aaPredicted RBP9.74□□□□□ -0.85
LRRC28-215ENST00000559774 OTUD6AQ7L8S5 288 aa9.74□□□□□ -0.85
LRRC28-215ENST00000559774 SESTD1Q86VW0 696 aa9.74□□□□□ -0.85
LRRC28-215ENST00000559774 CCDC60Q8IWA6 550 aaPredicted RBP9.74□□□□□ -0.85
LRRC28-215ENST00000559774 BBXQ8WY36 941 aaPredicted RBP9.74□□□□□ -0.85
LRRC28-215ENST00000559774 GLG1Q92896 1179 aa9.74□□□□□ -0.85
LRRC28-215ENST00000559774 GJA10Q969M2 543 aa9.74□□□□□ -0.85
LRRC28-215ENST00000559774 LENG1Q96BZ8 264 aaPredicted RBP9.74□□□□□ -0.85
LRRC28-215ENST00000559774 CALML4Q96GE6 196 aa9.74□□□□□ -0.85
LRRC28-215ENST00000559774 ABHD8Q96I13 439 aa9.74□□□□□ -0.85
LRRC28-215ENST00000559774 NACC1Q96RE7 527 aa9.74□□□□□ -0.85
LRRC28-215ENST00000559774 PCYT2Q99447 389 aa9.74□□□□□ -0.85
LRRC28-215ENST00000559774 CSRNP2Q9H175 543 aa9.74□□□□□ -0.85
LRRC28-215ENST00000559774 NRBP2Q9NSY0 501 aa9.74□□□□□ -0.85
LRRC28-215ENST00000559774 CCDC39Q9UFE4 941 aa9.74□□□□□ -0.85
LRRC28-215ENST00000559774 PCDHA7Q9UN72 937 aa9.74□□□□□ -0.85
LRRC28-215ENST00000559774 FAM237AA0A1B0GTK4 181 aa9.73□□□□□ -0.85
LRRC28-215ENST00000559774 MYADML2A6NDP7 307 aa9.73□□□□□ -0.85
LRRC28-215ENST00000559774 RRN3P2A6NIE6 340 aa9.73□□□□□ -0.85
LRRC28-215ENST00000559774 GOLGA6L22H0YM25 854 aa9.73□□□□□ -0.85
LRRC28-215ENST00000559774 CHMP2AO43633 222 aa9.73□□□□□ -0.85
LRRC28-215ENST00000559774 HBP1O60381 514 aa9.73□□□□□ -0.85
LRRC28-215ENST00000559774 MYL3P08590 195 aa9.73□□□□□ -0.85
LRRC28-215ENST00000559774 SPATA31C1P0DKV0 1188 aa9.73□□□□□ -0.85
LRRC28-215ENST00000559774 GNAT1P11488 350 aa9.73□□□□□ -0.85
LRRC28-215ENST00000559774 COL6A1P12109 1028 aa9.73□□□□□ -0.85
LRRC28-215ENST00000559774 CCT6AP40227 531 aaKnown RBP9.73□□□□□ -0.85
LRRC28-215ENST00000559774 MNX1P50219 401 aaPredicted RBP9.73□□□□□ -0.85
LRRC28-215ENST00000559774 BEX3Q00994 111 aa9.73□□□□□ -0.85
LRRC28-215ENST00000559774 SP4Q02446 784 aa9.73□□□□□ -0.85
LRRC28-215ENST00000559774 PDXDC2PQ6P474 469 aa9.73□□□□□ -0.85
LRRC28-215ENST00000559774 CATSPER3Q86XQ3 398 aa9.73□□□□□ -0.85
LRRC28-215ENST00000559774 TNS4Q8IZW8 715 aa9.73□□□□□ -0.85
LRRC28-215ENST00000559774 SLC43A3Q8NBI5 491 aa9.73□□□□□ -0.85
LRRC28-215ENST00000559774 SNX29Q8TEQ0 813 aa9.73□□□□□ -0.85
LRRC28-215ENST00000559774 ATP8B4Q8TF62 1192 aa9.73□□□□□ -0.85
LRRC28-215ENST00000559774 KAT2BQ92831 832 aa9.73□□□□□ -0.85
LRRC28-215ENST00000559774 LXNQ9BS40 222 aa9.73□□□□□ -0.85
LRRC28-215ENST00000559774 MMTAG2Q9BU76 263 aaKnown RBP9.73□□□□□ -0.85
LRRC28-215ENST00000559774 NIFKQ9BYG3 293 aaKnown RBP9.73□□□□□ -0.85
LRRC28-215ENST00000559774 ANKEF1Q9NU02 776 aa9.73□□□□□ -0.85
LRRC28-215ENST00000559774 FAM13BQ9NYF5 915 aa9.73□□□□□ -0.85
LRRC28-215ENST00000559774 GABBR1Q9UBS5 961 aa9.73□□□□□ -0.85
LRRC28-215ENST00000559774 MCM3APO60318 1980 aa9.73□□□□□ -0.85
LRRC28-215ENST00000559774 NRCAMQ92823 1304 aa9.73□□□□□ -0.85
LRRC28-215ENST00000559774 COL1A2P08123 1366 aa9.73□□□□□ -0.85
LRRC28-215ENST00000559774 A0A0U1RQG5 324 aaPredicted RBP9.72□□□□□ -0.85
LRRC28-215ENST00000559774 A0A1W2PQ45 241 aaPredicted RBP9.72□□□□□ -0.85
LRRC28-215ENST00000559774 A0A1W2PQY0 241 aa9.72□□□□□ -0.85
LRRC28-215ENST00000559774 POTEB3A0JP26 581 aa9.72□□□□□ -0.85
LRRC28-215ENST00000559774 GOLGA6L4A6NEF3 574 aa9.72□□□□□ -0.85
LRRC28-215ENST00000559774 MYCP01106 439 aaPredicted RBP9.72□□□□□ -0.85
LRRC28-215ENST00000559774 OATP04181 439 aa9.72□□□□□ -0.85
LRRC28-215ENST00000559774 RPLP2P05387 115 aaKnown RBP9.72□□□□□ -0.85
LRRC28-215ENST00000559774 HOXC8P31273 242 aa9.72□□□□□ -0.85
LRRC28-215ENST00000559774 PSEN2P49810 448 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms