RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 TBC1D22BQ9NU19 505 aa9.29□□□□□ -0.92
SNX1-207ENST00000559401 PTPRSQ13332 1948 aa9.29□□□□□ -0.92
SNX1-207ENST00000559401 TMEM265A0A087WTH1 108 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 POTEB3A0JP26 581 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 CHMP2AO43633 222 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 GAS7O60861 476 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 LGR5O75473 907 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 BAIAP3O94812 1187 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 TDP2O95551 362 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 CCNE2O96020 404 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 INSRRP14616 1297 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 FOSL2P15408 326 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 HOXC8P31273 242 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 KRT76Q01546 638 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 TRIM29Q14134 588 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 PLCB4Q15147 1175 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 INF2Q27J81 1249 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 PPP2R2DQ66LE6 453 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 GALNT17Q6IS24 598 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 PDXDC2PQ6P474 469 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 POTEBQ6S5H4 581 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 RUFY4Q6ZNE9 571 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 KRT25Q7Z3Z0 450 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 RSPH3Q86UC2 560 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 CCDC60Q8IWA6 550 aaPredicted RBP9.28□□□□□ -0.92
SNX1-207ENST00000559401 FAM177A1Q8N128 213 aaPredicted RBP9.28□□□□□ -0.92
SNX1-207ENST00000559401 DAGLBQ8NCG7 672 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 TRAPPC12Q8WVT3 735 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 MYLIPQ8WY64 445 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 VWCEQ96DN2 955 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 GUCD1Q96NT3 240 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 PCYT2Q99447 389 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 CDX2Q99626 313 aaPredicted RBP9.28□□□□□ -0.92
SNX1-207ENST00000559401 ZBED2Q9BTP6 218 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 PHF20Q9BVI0 1012 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 ZNF576Q9H609 170 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 UPF2Q9HAU5 1272 aaKnown RBP9.28□□□□□ -0.92
SNX1-207ENST00000559401 BRMS1Q9HCU9 246 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 ZNF302Q9NR11 478 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 GJB4Q9NTQ9 266 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 STXBP5LQ9Y2K9 1186 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 SIP14410 1827 aa9.28□□□□□ -0.92
SNX1-207ENST00000559401 MICAL3Q7RTP6 2002 aa9.27□□□□□ -0.92
SNX1-207ENST00000559401 WDR81Q562E7 1941 aa9.27□□□□□ -0.93
SNX1-207ENST00000559401 RRN3P2A6NIE6 340 aa9.27□□□□□ -0.93
SNX1-207ENST00000559401 KIF28PB7ZC32 967 aa9.27□□□□□ -0.93
SNX1-207ENST00000559401 RBAK-RBAKDNI3L0D1 243 aa9.27□□□□□ -0.93
SNX1-207ENST00000559401 M0QZ92 97 aa9.27□□□□□ -0.93
SNX1-207ENST00000559401 MARCH6O60337 910 aa9.27□□□□□ -0.93
SNX1-207ENST00000559401 CAND2O75155 1236 aa9.27□□□□□ -0.93
SNX1-207ENST00000559401 CTDNEP1O95476 244 aa9.27□□□□□ -0.93
SNX1-207ENST00000559401 CXCL10P02778 98 aa9.27□□□□□ -0.93
SNX1-207ENST00000559401 PSAPP07602 524 aa9.27□□□□□ -0.93
SNX1-207ENST00000559401 CIITAP33076 1130 aa9.27□□□□□ -0.93
SNX1-207ENST00000559401 SLC26A2P50443 739 aa9.27□□□□□ -0.93
SNX1-207ENST00000559401 USP11P51784 963 aa9.27□□□□□ -0.93
SNX1-207ENST00000559401 WDR5P61964 334 aaKnown RBP9.27□□□□□ -0.93
SNX1-207ENST00000559401 IKBKEQ14164 716 aa9.27□□□□□ -0.93
SNX1-207ENST00000559401 MBTPS1Q14703 1052 aa9.27□□□□□ -0.93
SNX1-207ENST00000559401 LETM2Q2VYF4 491 aa9.27□□□□□ -0.93
SNX1-207ENST00000559401 LRCH2Q5VUJ6 765 aa9.27□□□□□ -0.93
SNX1-207ENST00000559401 ZNF746Q6NUN9 644 aaPredicted RBP9.27□□□□□ -0.93
SNX1-207ENST00000559401 SWSAP1Q6NVH7 229 aa9.27□□□□□ -0.93
SNX1-207ENST00000559401 FAM117BQ6P1L5 589 aa9.27□□□□□ -0.93
SNX1-207ENST00000559401 TAF2Q6P1X5 1199 aa9.27□□□□□ -0.93
SNX1-207ENST00000559401 ABHD15Q6UXT9 468 aa9.27□□□□□ -0.93
SNX1-207ENST00000559401 PLPPR4Q7Z2D5 763 aa9.27□□□□□ -0.93
SNX1-207ENST00000559401 SMAP1Q8IYB5 467 aaPredicted RBP9.27□□□□□ -0.93
SNX1-207ENST00000559401 NSUN7Q8NE18 718 aaKnown RBP9.27□□□□□ -0.93
SNX1-207ENST00000559401 DNAJB3Q8WWF6 145 aa9.27□□□□□ -0.93
SNX1-207ENST00000559401 SEPT8Q92599 483 aa9.27□□□□□ -0.93
SNX1-207ENST00000559401 ZBTB10Q96DT7 871 aa9.27□□□□□ -0.93
SNX1-207ENST00000559401 IL17RAQ96F46 866 aa9.27□□□□□ -0.93
SNX1-207ENST00000559401 TEKT3Q9BXF9 490 aa9.27□□□□□ -0.93
SNX1-207ENST00000559401 GABBR1Q9UBS5 961 aa9.27□□□□□ -0.93
SNX1-207ENST00000559401 LIMCH1Q9UPQ0 1083 aa9.27□□□□□ -0.93
SNX1-207ENST00000559401 YBX2Q9Y2T7 364 aaKnown RBP9.27□□□□□ -0.93
SNX1-207ENST00000559401 PCDHA11Q9Y5I1 949 aa9.27□□□□□ -0.93
SNX1-207ENST00000559401 ABHD14A-ACY1A0A1B0GW23 586 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 WDR64B1ANS9 1081 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 MSH4O15457 936 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 DHX15O43143 795 aaKnown RBP9.26□□□□□ -0.93
SNX1-207ENST00000559401 TLL1O43897 1013 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 HBP1O60381 514 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 JAK2O60674 1132 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 EFCAB14O75071 495 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 ATG7O95352 703 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 CA3P07451 260 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 GHRP10912 638 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 MYOGP15173 224 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 KRT2P35908 639 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 ADAM17P78536 824 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 DEFB103AP81534 67 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 TMEM62Q0P6H9 643 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 GPNMBQ14956 572 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 GRIN2CQ14957 1233 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 NPY5RQ15761 445 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 TCTN1Q2MV58 587 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 TRAF7Q6Q0C0 670 aa9.26□□□□□ -0.93
SNX1-207ENST00000559401 PIK3AP1Q6ZUJ8 805 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms