RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 RPA1P27694 616 aa16.65■□□□□ 0.26
SNRPA1-207ENST00000559309 HOXC8P31273 242 aa16.65■□□□□ 0.26
SNRPA1-207ENST00000559309 BEX3Q00994 111 aa16.65■□□□□ 0.26
SNRPA1-207ENST00000559309 DGKDQ16760 1214 aa16.65■□□□□ 0.26
SNRPA1-207ENST00000559309 SHC4Q6S5L8 630 aa16.65■□□□□ 0.26
SNRPA1-207ENST00000559309 MIER3Q7Z3K6 550 aa16.65■□□□□ 0.26
SNRPA1-207ENST00000559309 UBE2Q1Q7Z7E8 422 aa16.65■□□□□ 0.26
SNRPA1-207ENST00000559309 KCTD17Q8N5Z5 321 aa16.65■□□□□ 0.26
SNRPA1-207ENST00000559309 ANKLE1Q8NAG6 615 aa16.65■□□□□ 0.26
SNRPA1-207ENST00000559309 NEK9Q8TD19 979 aa16.65■□□□□ 0.26
SNRPA1-207ENST00000559309 PHF24Q9UPV7 400 aa16.65■□□□□ 0.26
SNRPA1-207ENST00000559309 MYH9P35579 1960 aaKnown RBP16.65■□□□□ 0.26
SNRPA1-207ENST00000559309 A0A1W2PQ27 194 aa16.64■□□□□ 0.25
SNRPA1-207ENST00000559309 A0A1W2PQ64 194 aa16.64■□□□□ 0.25
SNRPA1-207ENST00000559309 A0A1W2PQD8 194 aa16.64■□□□□ 0.25
SNRPA1-207ENST00000559309 MOXD2PA6NHM9 499 aa16.64■□□□□ 0.25
SNRPA1-207ENST00000559309 PP2D1A8MPX8 630 aa16.64■□□□□ 0.25
SNRPA1-207ENST00000559309 DNM1LO00429 736 aa16.64■□□□□ 0.25
SNRPA1-207ENST00000559309 MED24O75448 989 aa16.64■□□□□ 0.25
SNRPA1-207ENST00000559309 P4HBP07237 508 aaKnown RBP16.64■□□□□ 0.25
SNRPA1-207ENST00000559309 PSAPP07602 524 aa16.64■□□□□ 0.25
SNRPA1-207ENST00000559309 C6orf222P0C671 652 aaPredicted RBP16.64■□□□□ 0.25
SNRPA1-207ENST00000559309 COL6A1P12109 1028 aa16.64■□□□□ 0.25
SNRPA1-207ENST00000559309 SLC26A2P50443 739 aa16.64■□□□□ 0.25
SNRPA1-207ENST00000559309 ECM1Q16610 540 aa16.64■□□□□ 0.25
SNRPA1-207ENST00000559309 UGCGQ16739 394 aa16.64■□□□□ 0.25
SNRPA1-207ENST00000559309 RESP18Q5W5W9 173 aa16.64■□□□□ 0.25
SNRPA1-207ENST00000559309 MIS18BP1Q6P0N0 1132 aa16.64■□□□□ 0.25
SNRPA1-207ENST00000559309 USP49Q70CQ1 688 aa16.64■□□□□ 0.25
SNRPA1-207ENST00000559309 RNF180Q86T96 592 aa16.64■□□□□ 0.25
SNRPA1-207ENST00000559309 CATSPER3Q86XQ3 398 aa16.64■□□□□ 0.25
SNRPA1-207ENST00000559309 ARRDC4Q8NCT1 418 aa16.64■□□□□ 0.25
SNRPA1-207ENST00000559309 EIF2AK1Q9BQI3 630 aaKnown RBP16.64■□□□□ 0.25
SNRPA1-207ENST00000559309 RAB34Q9BZG1 259 aa16.64■□□□□ 0.25
SNRPA1-207ENST00000559309 SPC25Q9HBM1 224 aa16.64■□□□□ 0.25
SNRPA1-207ENST00000559309 GDPD2Q9HCC8 539 aa16.64■□□□□ 0.25
SNRPA1-207ENST00000559309 TUFT1Q9NNX1 390 aa16.64■□□□□ 0.25
SNRPA1-207ENST00000559309 HPSEQ9Y251 543 aa16.64■□□□□ 0.25
SNRPA1-207ENST00000559309 STK24Q9Y6E0 443 aa16.64■□□□□ 0.25
SNRPA1-207ENST00000559309 ARID2Q68CP9 1835 aa16.63■□□□□ 0.25
SNRPA1-207ENST00000559309 NOP56O00567 594 aaKnown RBP16.63■□□□□ 0.25
SNRPA1-207ENST00000559309 MARCH6O60337 910 aa16.63■□□□□ 0.25
SNRPA1-207ENST00000559309 SORBS3O60504 671 aa16.63■□□□□ 0.25
SNRPA1-207ENST00000559309 ASGR1P07306 291 aa16.63■□□□□ 0.25
SNRPA1-207ENST00000559309 KCNA10Q16322 511 aa16.63■□□□□ 0.25
SNRPA1-207ENST00000559309 TMEM119Q4V9L6 283 aa16.63■□□□□ 0.25
SNRPA1-207ENST00000559309 GNASQ5JWF2 1037 aa16.63■□□□□ 0.25
SNRPA1-207ENST00000559309 NCAPH2Q6IBW4 605 aa16.63■□□□□ 0.25
SNRPA1-207ENST00000559309 C4orf19Q8IY42 314 aa16.63■□□□□ 0.25
SNRPA1-207ENST00000559309 SLC43A3Q8NBI5 491 aa16.63■□□□□ 0.25
SNRPA1-207ENST00000559309 PCSK9Q8NBP7 692 aaKnown RBP16.63■□□□□ 0.25
SNRPA1-207ENST00000559309 LRRC15Q8TF66 581 aa16.63■□□□□ 0.25
SNRPA1-207ENST00000559309 PNMA5Q96PV4 448 aa16.63■□□□□ 0.25
SNRPA1-207ENST00000559309 CEP89Q96ST8 783 aa16.63■□□□□ 0.25
SNRPA1-207ENST00000559309 RGL1Q9NZL6 768 aa16.63■□□□□ 0.25
SNRPA1-207ENST00000559309 LOXHD1Q8IVV2 1947 aa16.62■□□□□ 0.25
SNRPA1-207ENST00000559309 CHMP2AO43633 222 aa16.62■□□□□ 0.25
SNRPA1-207ENST00000559309 CMA1P23946 247 aa16.62■□□□□ 0.25
SNRPA1-207ENST00000559309 CDC25AP30304 524 aa16.62■□□□□ 0.25
SNRPA1-207ENST00000559309 QARSP47897 775 aaKnown RBP16.62■□□□□ 0.25
SNRPA1-207ENST00000559309 STAT5BP51692 787 aa16.62■□□□□ 0.25
SNRPA1-207ENST00000559309 ACLYP53396 1101 aa16.62■□□□□ 0.25
SNRPA1-207ENST00000559309 GRB10Q13322 594 aa16.62■□□□□ 0.25
SNRPA1-207ENST00000559309 BRDTQ58F21 947 aaPredicted RBP16.62■□□□□ 0.25
SNRPA1-207ENST00000559309 SWSAP1Q6NVH7 229 aa16.62■□□□□ 0.25
SNRPA1-207ENST00000559309 SYMPKQ92797 1274 aaKnown RBP16.62■□□□□ 0.25
SNRPA1-207ENST00000559309 DYDC2Q96IM9 177 aa16.62■□□□□ 0.25
SNRPA1-207ENST00000559309 EPSTI1Q96J88 318 aa16.62■□□□□ 0.25
SNRPA1-207ENST00000559309 LXNQ9BS40 222 aa16.62■□□□□ 0.25
SNRPA1-207ENST00000559309 SMARCAD1Q9H4L7 1026 aa16.62■□□□□ 0.25
SNRPA1-207ENST00000559309 ZNF302Q9NR11 478 aa16.62■□□□□ 0.25
SNRPA1-207ENST00000559309 GRIN2DO15399 1336 aa16.62■□□□□ 0.25
SNRPA1-207ENST00000559309 A0A087X0B3 334 aa16.61■□□□□ 0.25
SNRPA1-207ENST00000559309 H3BRB1 525 aa16.61■□□□□ 0.25
SNRPA1-207ENST00000559309 CABYRO75952 493 aa16.61■□□□□ 0.25
SNRPA1-207ENST00000559309 XRCC6P12956 609 aaKnown RBP eCLIP16.61■□□□□ 0.25
SNRPA1-207ENST00000559309 EN2P19622 333 aaPredicted RBP16.61■□□□□ 0.25
SNRPA1-207ENST00000559309 ME1P48163 572 aa16.61■□□□□ 0.25
SNRPA1-207ENST00000559309 PSMC5P62195 406 aa16.61■□□□□ 0.25
SNRPA1-207ENST00000559309 ADAM17P78536 824 aa16.61■□□□□ 0.25
SNRPA1-207ENST00000559309 SP4Q02446 784 aa16.61■□□□□ 0.25
SNRPA1-207ENST00000559309 PLCB4Q15147 1175 aa16.61■□□□□ 0.25
SNRPA1-207ENST00000559309 TARBP2Q15633 366 aaKnown RBP16.61■□□□□ 0.25
SNRPA1-207ENST00000559309 E2F4Q16254 413 aa16.61■□□□□ 0.25
SNRPA1-207ENST00000559309 HABP4Q5JVS0 413 aaKnown RBP16.61■□□□□ 0.25
SNRPA1-207ENST00000559309 HAUS3Q68CZ6 603 aa16.61■□□□□ 0.25
SNRPA1-207ENST00000559309 SESTD1Q86VW0 696 aa16.61■□□□□ 0.25
SNRPA1-207ENST00000559309 TRIM50Q86XT4 487 aa16.61■□□□□ 0.25
SNRPA1-207ENST00000559309 MTG1Q9BT17 334 aaPredicted RBP16.61■□□□□ 0.25
SNRPA1-207ENST00000559309 TUT1Q9H6E5 874 aaKnown RBP16.61■□□□□ 0.25
SNRPA1-207ENST00000559309 ZSWIM4Q9H7M6 989 aa16.61■□□□□ 0.25
SNRPA1-207ENST00000559309 ERAP1Q9NZ08 941 aa16.61■□□□□ 0.25
SNRPA1-207ENST00000559309 GABBR1Q9UBS5 961 aa16.61■□□□□ 0.25
SNRPA1-207ENST00000559309 TCEAL9Q9UHQ7 104 aa16.61■□□□□ 0.25
SNRPA1-207ENST00000559309 ZBTB42B2RXF5 422 aa16.6■□□□□ 0.25
SNRPA1-207ENST00000559309 ZEB2O60315 1214 aa16.6■□□□□ 0.25
SNRPA1-207ENST00000559309 ZNF286BP0CG31 522 aa16.6■□□□□ 0.25
SNRPA1-207ENST00000559309 NCLP19338 710 aaKnown RBP16.6■□□□□ 0.25
SNRPA1-207ENST00000559309 NAALADL2Q58DX5 795 aa16.6■□□□□ 0.25
SNRPA1-207ENST00000559309 C1orf53Q5VUE5 145 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms