RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 GALNT17Q6IS24 598 aa14.36□□□□□ -0.11
RABGGTA-207ENST00000558936 CPLX2Q6PUV4 134 aaKnown RBP14.36□□□□□ -0.11
RABGGTA-207ENST00000558936 FAM177A1Q8N128 213 aaPredicted RBP14.36□□□□□ -0.11
RABGGTA-207ENST00000558936 BICD2Q8TD16 824 aa14.36□□□□□ -0.11
RABGGTA-207ENST00000558936 CEP89Q96ST8 783 aa14.36□□□□□ -0.11
RABGGTA-207ENST00000558936 ZNF577Q9BSK1 485 aa14.36□□□□□ -0.11
RABGGTA-207ENST00000558936 UNC45AQ9H3U1 944 aa14.36□□□□□ -0.11
RABGGTA-207ENST00000558936 IL23AQ9NPF7 189 aa14.36□□□□□ -0.11
RABGGTA-207ENST00000558936 WRAP73Q9P2S5 460 aaPredicted RBP14.36□□□□□ -0.11
RABGGTA-207ENST00000558936 VAV3Q9UKW4 847 aa14.36□□□□□ -0.11
RABGGTA-207ENST00000558936 SPTBN5Q9NRC6 3674 aaKnown RBP14.36□□□□□ -0.11
RABGGTA-207ENST00000558936 PITPNM1O00562 1244 aa14.35□□□□□ -0.11
RABGGTA-207ENST00000558936 SUPT20HL2P0C7V6 817 aa14.35□□□□□ -0.11
RABGGTA-207ENST00000558936 INSRRP14616 1297 aa14.35□□□□□ -0.11
RABGGTA-207ENST00000558936 ZNF76P36508 570 aa14.35□□□□□ -0.11
RABGGTA-207ENST00000558936 NONOQ15233 471 aaKnown RBP eCLIP14.35□□□□□ -0.11
RABGGTA-207ENST00000558936 Q7L0L9 218 aa14.35□□□□□ -0.11
RABGGTA-207ENST00000558936 DIS3L2Q8IYB7 885 aaKnown RBP14.35□□□□□ -0.11
RABGGTA-207ENST00000558936 C7orf31Q8N865 590 aa14.35□□□□□ -0.11
RABGGTA-207ENST00000558936 GIMAP8Q8ND71 665 aaPredicted RBP14.35□□□□□ -0.11
RABGGTA-207ENST00000558936 AFAP1L1Q8TED9 768 aa14.35□□□□□ -0.11
RABGGTA-207ENST00000558936 LLPHQ9BRT6 129 aaKnown RBP14.35□□□□□ -0.11
RABGGTA-207ENST00000558936 EHMT1Q9H9B1 1298 aa14.35□□□□□ -0.11
RABGGTA-207ENST00000558936 MAFBQ9Y5Q3 323 aaPredicted RBP14.35□□□□□ -0.11
RABGGTA-207ENST00000558936 MICAL3Q7RTP6 2002 aa14.35□□□□□ -0.11
RABGGTA-207ENST00000558936 TMEM150BA6NC51 233 aa14.34□□□□□ -0.11
RABGGTA-207ENST00000558936 EIF5BO60841 1220 aaKnown RBP14.34□□□□□ -0.11
RABGGTA-207ENST00000558936 ARHGEF15O94989 841 aa14.34□□□□□ -0.11
RABGGTA-207ENST00000558936 CHRNA1P02708 482 aa14.34□□□□□ -0.11
RABGGTA-207ENST00000558936 CXCL10P02778 98 aa14.34□□□□□ -0.11
RABGGTA-207ENST00000558936 PBX2P40425 430 aa14.34□□□□□ -0.11
RABGGTA-207ENST00000558936 TOB1P50616 345 aaPredicted RBP14.34□□□□□ -0.11
RABGGTA-207ENST00000558936 MGAT3Q09327 533 aa14.34□□□□□ -0.11
RABGGTA-207ENST00000558936 PTK7Q13308 1070 aa14.34□□□□□ -0.11
RABGGTA-207ENST00000558936 LETM2Q2VYF4 491 aa14.34□□□□□ -0.11
RABGGTA-207ENST00000558936 SWSAP1Q6NVH7 229 aa14.34□□□□□ -0.11
RABGGTA-207ENST00000558936 MOXD1Q6UVY6 613 aa14.34□□□□□ -0.11
RABGGTA-207ENST00000558936 PLPPR4Q7Z2D5 763 aa14.34□□□□□ -0.11
RABGGTA-207ENST00000558936 KRT25Q7Z3Z0 450 aa14.34□□□□□ -0.11
RABGGTA-207ENST00000558936 DEFB128Q7Z7B8 93 aa14.34□□□□□ -0.11
RABGGTA-207ENST00000558936 POTEDQ86YR6 584 aa14.34□□□□□ -0.11
RABGGTA-207ENST00000558936 TMEM199Q8N511 208 aa14.34□□□□□ -0.11
RABGGTA-207ENST00000558936 FBXO18Q8NFZ0 1043 aa14.34□□□□□ -0.11
RABGGTA-207ENST00000558936 ZSCAN31Q96LW9 406 aaPredicted RBP14.34□□□□□ -0.11
RABGGTA-207ENST00000558936 KATNAL1Q9BW62 490 aa14.34□□□□□ -0.11
RABGGTA-207ENST00000558936 TMEM60Q9H2L4 133 aa14.34□□□□□ -0.11
RABGGTA-207ENST00000558936 C17orf102A2RUQ5 167 aa14.33□□□□□ -0.12
RABGGTA-207ENST00000558936 KRT2P35908 639 aa14.33□□□□□ -0.12
RABGGTA-207ENST00000558936 STAT5BP51692 787 aa14.33□□□□□ -0.12
RABGGTA-207ENST00000558936 PPIGQ13427 754 aaKnown RBP eCLIP14.33□□□□□ -0.122e-10■■■■□ 21.1
RABGGTA-207ENST00000558936 NBR1Q14596 966 aa14.33□□□□□ -0.12
RABGGTA-207ENST00000558936 GRIK4Q16099 956 aa14.33□□□□□ -0.12
RABGGTA-207ENST00000558936 MCTP2Q6DN12 878 aa14.33□□□□□ -0.12
RABGGTA-207ENST00000558936 PPP4R3AQ6IN85 833 aa14.33□□□□□ -0.12
RABGGTA-207ENST00000558936 OTOP2Q7RTS6 562 aa14.33□□□□□ -0.12
RABGGTA-207ENST00000558936 TMCO2Q7Z6W1 182 aaPredicted RBP14.33□□□□□ -0.12
RABGGTA-207ENST00000558936 HERVK_113Q902F9 699 aa14.33□□□□□ -0.12
RABGGTA-207ENST00000558936 ATP6V0A1Q93050 837 aa14.33□□□□□ -0.12
RABGGTA-207ENST00000558936 SDF4Q9BRK5 362 aa14.33□□□□□ -0.12
RABGGTA-207ENST00000558936 TTYH1Q9H313 450 aaPredicted RBP14.33□□□□□ -0.12
RABGGTA-207ENST00000558936 SMARCAD1Q9H4L7 1026 aa14.33□□□□□ -0.12
RABGGTA-207ENST00000558936 SH2B1Q9NRF2 756 aaPredicted RBP14.33□□□□□ -0.12
RABGGTA-207ENST00000558936 ERAP1Q9NZ08 941 aa14.33□□□□□ -0.12
RABGGTA-207ENST00000558936 IGSF9BQ9UPX0 1349 aa14.33□□□□□ -0.12
RABGGTA-207ENST00000558936 COL4A6Q14031 1691 aa14.33□□□□□ -0.12
RABGGTA-207ENST00000558936 PRUNE2Q8WUY3 3088 aa14.32□□□□□ -0.12
RABGGTA-207ENST00000558936 SELPP16109 830 aa14.32□□□□□ -0.12
RABGGTA-207ENST00000558936 SETQ01105 290 aaPredicted RBP14.32□□□□□ -0.12
RABGGTA-207ENST00000558936 CUL4AQ13619 759 aa14.32□□□□□ -0.12
RABGGTA-207ENST00000558936 ZNF746Q6NUN9 644 aaPredicted RBP14.32□□□□□ -0.12
RABGGTA-207ENST00000558936 LRRC8DQ7L1W4 858 aa14.32□□□□□ -0.12
RABGGTA-207ENST00000558936 SPRED2Q7Z698 418 aa14.32□□□□□ -0.12
RABGGTA-207ENST00000558936 NEK8Q86SG6 692 aa14.32□□□□□ -0.12
RABGGTA-207ENST00000558936 LINC01465Q8N7H1 131 aa14.32□□□□□ -0.12
RABGGTA-207ENST00000558936 C4orf32Q8N8J7 132 aa14.32□□□□□ -0.12
RABGGTA-207ENST00000558936 ZNF579Q8NAF0 562 aaKnown RBP14.32□□□□□ -0.12
RABGGTA-207ENST00000558936 MTMR9Q96QG7 549 aa14.32□□□□□ -0.12
RABGGTA-207ENST00000558936 RIT2Q99578 217 aa14.32□□□□□ -0.12
RABGGTA-207ENST00000558936 CDHR5Q9HBB8 845 aa14.32□□□□□ -0.12
RABGGTA-207ENST00000558936 TBC1D22BQ9NU19 505 aa14.32□□□□□ -0.12
RABGGTA-207ENST00000558936 DDX25Q9UHL0 483 aaKnown RBP14.32□□□□□ -0.12
RABGGTA-207ENST00000558936 ARID2Q68CP9 1835 aa14.31□□□□□ -0.12
RABGGTA-207ENST00000558936 ZBTB39O15060 712 aa14.31□□□□□ -0.12
RABGGTA-207ENST00000558936 MYOGP15173 224 aa14.31□□□□□ -0.12
RABGGTA-207ENST00000558936 PPFIA1Q13136 1202 aa14.31□□□□□ -0.12
RABGGTA-207ENST00000558936 FAM26DQ5JW98 314 aa14.31□□□□□ -0.12
RABGGTA-207ENST00000558936 RPAINQ86UA6 219 aa14.31□□□□□ -0.12
RABGGTA-207ENST00000558936 CAGE1Q8TC20 777 aa14.31□□□□□ -0.12
RABGGTA-207ENST00000558936 GLG1Q92896 1179 aa14.31□□□□□ -0.12
RABGGTA-207ENST00000558936 SH2D3AQ9BRG2 576 aa14.31□□□□□ -0.12
RABGGTA-207ENST00000558936 GABBR1Q9UBS5 961 aa14.31□□□□□ -0.12
RABGGTA-207ENST00000558936 YBX2Q9Y2T7 364 aaKnown RBP14.31□□□□□ -0.12
RABGGTA-207ENST00000558936 NRCAMQ92823 1304 aa14.31□□□□□ -0.12
RABGGTA-207ENST00000558936 CHMP2AO43633 222 aa14.3□□□□□ -0.12
RABGGTA-207ENST00000558936 CCNT1O60563 726 aaKnown RBP14.3□□□□□ -0.12
RABGGTA-207ENST00000558936 CTSHP09668 335 aa14.3□□□□□ -0.12
RABGGTA-207ENST00000558936 THPOP40225 353 aa14.3□□□□□ -0.12
RABGGTA-207ENST00000558936 IGBP1P78318 339 aa14.3□□□□□ -0.12
RABGGTA-207ENST00000558936 DRP2Q13474 957 aa14.3□□□□□ -0.12
RABGGTA-207ENST00000558936 TARBP2Q15633 366 aaKnown RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms