RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 TMEM139Q8IV31 216 aa14.42□□□□□ -0.1
SMAD3-207ENST00000558763 GUF1Q8N442 669 aaKnown RBP14.42□□□□□ -0.1
SMAD3-207ENST00000558763 SYT2Q8N9I0 419 aaPredicted RBP14.42□□□□□ -0.1
SMAD3-207ENST00000558763 CCDC47Q96A33 483 aaKnown RBP14.42□□□□□ -0.1
SMAD3-207ENST00000558763 TMX1Q9H3N1 280 aa14.42□□□□□ -0.1
SMAD3-207ENST00000558763 UNC45AQ9H3U1 944 aa14.42□□□□□ -0.1
SMAD3-207ENST00000558763 THAP9Q9H5L6 903 aa14.42□□□□□ -0.1
SMAD3-207ENST00000558763 ZFYVE28Q9HCC9 887 aa14.42□□□□□ -0.1
SMAD3-207ENST00000558763 KCNH7Q9NS40 1196 aa14.42□□□□□ -0.1
SMAD3-207ENST00000558763 WRAP73Q9P2S5 460 aaPredicted RBP14.42□□□□□ -0.1
SMAD3-207ENST00000558763 MORF4L1Q9UBU8 362 aa14.42□□□□□ -0.1
SMAD3-207ENST00000558763 STK24Q9Y6E0 443 aa14.42□□□□□ -0.1
SMAD3-207ENST00000558763 THSD7BQ9C0I4 1608 aa14.41□□□□□ -0.1
SMAD3-207ENST00000558763 IPO5O00410 1097 aaKnown RBP14.41□□□□□ -0.1
SMAD3-207ENST00000558763 NKRFO15226 690 aaKnown RBP eCLIP14.41□□□□□ -0.1
SMAD3-207ENST00000558763 TLR2O60603 784 aa14.41□□□□□ -0.1
SMAD3-207ENST00000558763 SLITRK3O94933 977 aa14.41□□□□□ -0.1
SMAD3-207ENST00000558763 SKILP12757 684 aa14.41□□□□□ -0.1
SMAD3-207ENST00000558763 PPP1R2P41236 205 aa14.41□□□□□ -0.1
SMAD3-207ENST00000558763 COPB1P53618 953 aaKnown RBP14.41□□□□□ -0.1
SMAD3-207ENST00000558763 GOLGA8FQ08AF8 430 aa14.41□□□□□ -0.1
SMAD3-207ENST00000558763 GOLGA8DPQ0D2H9 430 aa14.41□□□□□ -0.1
SMAD3-207ENST00000558763 ITGB3BPQ13352 177 aaPredicted RBP14.41□□□□□ -0.1
SMAD3-207ENST00000558763 PGM5Q15124 567 aa14.41□□□□□ -0.1
SMAD3-207ENST00000558763 FAM110CQ1W6H9 321 aa14.41□□□□□ -0.1
SMAD3-207ENST00000558763 TKFCQ3LXA3 575 aa14.41□□□□□ -0.1
SMAD3-207ENST00000558763 CTAGE1Q96RT6 745 aa14.41□□□□□ -0.1
SMAD3-207ENST00000558763 PDCD2LQ9BRP1 358 aa14.41□□□□□ -0.1
SMAD3-207ENST00000558763 ZNF577Q9BSK1 485 aa14.41□□□□□ -0.1
SMAD3-207ENST00000558763 WDR11Q9BZH6 1224 aa14.41□□□□□ -0.1
SMAD3-207ENST00000558763 EFCC1Q9HA90 598 aa14.41□□□□□ -0.1
SMAD3-207ENST00000558763 GAS7O60861 476 aa14.4□□□□□ -0.1
SMAD3-207ENST00000558763 ALDH1A1P00352 501 aa14.4□□□□□ -0.1
SMAD3-207ENST00000558763 IDEP14735 1019 aa14.4□□□□□ -0.1
SMAD3-207ENST00000558763 EIF2AK2P19525 551 aaKnown RBP14.4□□□□□ -0.1
SMAD3-207ENST00000558763 SFPQP23246 707 aaKnown RBP eCLIP14.4□□□□□ -0.1
SMAD3-207ENST00000558763 MAP2K2P36507 400 aa14.4□□□□□ -0.1
SMAD3-207ENST00000558763 SPAG1Q07617 926 aa14.4□□□□□ -0.1
SMAD3-207ENST00000558763 PSMD2Q13200 908 aa14.4□□□□□ -0.1
SMAD3-207ENST00000558763 TPD52L1Q16890 204 aaPredicted RBP14.4□□□□□ -0.1
SMAD3-207ENST00000558763 ZCWPW2Q504Y3 356 aa14.4□□□□□ -0.1
SMAD3-207ENST00000558763 RNF207Q6ZRF8 634 aa14.4□□□□□ -0.1
SMAD3-207ENST00000558763 TC2NQ8N9U0 490 aa14.4□□□□□ -0.1
SMAD3-207ENST00000558763 CHST13Q8NET6 341 aa14.4□□□□□ -0.1
SMAD3-207ENST00000558763 TRIM47Q96LD4 638 aa14.4□□□□□ -0.1
SMAD3-207ENST00000558763 RIT2Q99578 217 aa14.4□□□□□ -0.1
SMAD3-207ENST00000558763 TUFT1Q9NNX1 390 aa14.4□□□□□ -0.1
SMAD3-207ENST00000558763 A1CFQ9NQ94 594 aaKnown RBP14.4□□□□□ -0.1
SMAD3-207ENST00000558763 PXMP2Q9NR77 195 aa14.4□□□□□ -0.1
SMAD3-207ENST00000558763 CA12O43570 354 aa14.4□□□□□ -0.1
SMAD3-207ENST00000558763 CHMP2AO43633 222 aa14.4□□□□□ -0.1
SMAD3-207ENST00000558763 SLC25A27O95847 323 aa14.4□□□□□ -0.1
SMAD3-207ENST00000558763 SSBP05455 408 aaKnown RBP eCLIP14.4□□□□□ -0.1
SMAD3-207ENST00000558763 CCNA1P78396 465 aa14.4□□□□□ -0.1
SMAD3-207ENST00000558763 CACNB1Q02641 598 aaPredicted RBP14.4□□□□□ -0.1
SMAD3-207ENST00000558763 BAATQ14032 418 aaPredicted RBP14.4□□□□□ -0.1
SMAD3-207ENST00000558763 GIT2Q14161 759 aa14.4□□□□□ -0.1
SMAD3-207ENST00000558763 CEP135Q66GS9 1140 aa14.4□□□□□ -0.1
SMAD3-207ENST00000558763 REM2Q8IYK8 340 aaPredicted RBP14.4□□□□□ -0.1
SMAD3-207ENST00000558763 ANKRD35Q8N283 1001 aa14.4□□□□□ -0.1
SMAD3-207ENST00000558763 KCTD17Q8N5Z5 321 aa14.4□□□□□ -0.1
SMAD3-207ENST00000558763 DYDC2Q96IM9 177 aa14.4□□□□□ -0.1
SMAD3-207ENST00000558763 SRRTQ9BXP5 876 aaKnown RBP14.4□□□□□ -0.1
SMAD3-207ENST00000558763 AGO4Q9HCK5 861 aaKnown RBP14.4□□□□□ -0.1
SMAD3-207ENST00000558763 JADE2Q9NQC1 790 aa14.4□□□□□ -0.1
SMAD3-207ENST00000558763 PANK4Q9NVE7 773 aa14.4□□□□□ -0.1
SMAD3-207ENST00000558763 TAB2Q9NYJ8 693 aa14.4□□□□□ -0.1
SMAD3-207ENST00000558763 FBXO40Q9UH90 709 aa14.4□□□□□ -0.1
SMAD3-207ENST00000558763 DOCK5Q9H7D0 1870 aa14.39□□□□□ -0.11
SMAD3-207ENST00000558763 EYA4O95677 639 aa14.39□□□□□ -0.11
SMAD3-207ENST00000558763 EEF1GP26641 437 aaKnown RBP14.39□□□□□ -0.11
SMAD3-207ENST00000558763 CTTNQ14247 550 aaKnown RBP14.39□□□□□ -0.11
SMAD3-207ENST00000558763 FAM26FQ5R3K3 315 aa14.39□□□□□ -0.11
SMAD3-207ENST00000558763 FOXR2Q6PJQ5 311 aa14.39□□□□□ -0.11
SMAD3-207ENST00000558763 C17orf99Q6UX52 265 aa14.39□□□□□ -0.11
SMAD3-207ENST00000558763 RMDN3Q96TC7 470 aa14.39□□□□□ -0.11
SMAD3-207ENST00000558763 RUSC1Q9BVN2 902 aa14.39□□□□□ -0.11
SMAD3-207ENST00000558763 MROH8Q9H579 483 aa14.39□□□□□ -0.11
SMAD3-207ENST00000558763 KCND1Q9NSA2 647 aa14.39□□□□□ -0.11
SMAD3-207ENST00000558763 DNM3Q9UQ16 869 aa14.39□□□□□ -0.11
SMAD3-207ENST00000558763 ITIH6Q6UXX5 1313 aa14.39□□□□□ -0.11
SMAD3-207ENST00000558763 BICDL2A1A5D9 508 aa14.38□□□□□ -0.11
SMAD3-207ENST00000558763 USP27XA6NNY8 438 aa14.38□□□□□ -0.11
SMAD3-207ENST00000558763 ZBTB39O15060 712 aa14.38□□□□□ -0.11
SMAD3-207ENST00000558763 TBC1D8O95759 1140 aa14.38□□□□□ -0.11
SMAD3-207ENST00000558763 COPB2P35606 906 aa14.38□□□□□ -0.11
SMAD3-207ENST00000558763 LRRC41Q15345 812 aa14.38□□□□□ -0.11
SMAD3-207ENST00000558763 LRRC55Q6ZSA7 311 aa14.38□□□□□ -0.11
SMAD3-207ENST00000558763 CSGALNACT2Q8N6G5 542 aa14.38□□□□□ -0.11
SMAD3-207ENST00000558763 ZNF507Q8TCN5 953 aa14.38□□□□□ -0.11
SMAD3-207ENST00000558763 NOC3LQ8WTT2 800 aaKnown RBP14.38□□□□□ -0.11
SMAD3-207ENST00000558763 EEF2KMTQ96G04 330 aa14.38□□□□□ -0.11
SMAD3-207ENST00000558763 REEP2Q9BRK0 252 aa14.38□□□□□ -0.11
SMAD3-207ENST00000558763 TEKT3Q9BXF9 490 aa14.38□□□□□ -0.11
SMAD3-207ENST00000558763 BHMT2Q9H2M3 363 aa14.38□□□□□ -0.11
SMAD3-207ENST00000558763 BCAS3Q9H6U6 928 aa14.38□□□□□ -0.11
SMAD3-207ENST00000558763 CYP39A1Q9NYL5 469 aa14.38□□□□□ -0.11
SMAD3-207ENST00000558763 LRRC37A2A6NM11 1700 aa14.38□□□□□ -0.11
SMAD3-207ENST00000558763 PLXNB2O15031 1838 aa14.38□□□□□ -0.11
SMAD3-207ENST00000558763 TRPA1O75762 1119 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms