RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 PCYT2Q99447 389 aa13.19□□□□□ -0.3
CASC4-205ENST00000558735 MXRA8Q9BRK3 442 aa13.19□□□□□ -0.3
CASC4-205ENST00000558735 KCNH7Q9NS40 1196 aa13.19□□□□□ -0.3
CASC4-205ENST00000558735 PRKAG3Q9UGI9 489 aa13.19□□□□□ -0.3
CASC4-205ENST00000558735 KLF18A0A0U1RQI7 1052 aa13.18□□□□□ -0.3
CASC4-205ENST00000558735 SMCO2A6NFE2 343 aa13.18□□□□□ -0.3
CASC4-205ENST00000558735 C19orf67A6NJJ6 358 aa13.18□□□□□ -0.3
CASC4-205ENST00000558735 STXBP3O00186 592 aa13.18□□□□□ -0.3
CASC4-205ENST00000558735 DCXO43602 365 aa13.18□□□□□ -0.3
CASC4-205ENST00000558735 ARP10275 920 aa13.18□□□□□ -0.3
CASC4-205ENST00000558735 IL9P15248 144 aa13.18□□□□□ -0.3
CASC4-205ENST00000558735 NAPAP54920 295 aa13.18□□□□□ -0.3
CASC4-205ENST00000558735 KRT32Q14532 448 aa13.18□□□□□ -0.3
CASC4-205ENST00000558735 MARCH8Q5T0T0 291 aa13.18□□□□□ -0.3
CASC4-205ENST00000558735 RUFY4Q6ZNE9 571 aa13.18□□□□□ -0.3
CASC4-205ENST00000558735 RPAINQ86UA6 219 aa13.18□□□□□ -0.3
CASC4-205ENST00000558735 FBXO22Q8NEZ5 403 aa13.18□□□□□ -0.3
CASC4-205ENST00000558735 SEPT8Q92599 483 aa13.18□□□□□ -0.3
CASC4-205ENST00000558735 TOP1MTQ969P6 601 aa13.18□□□□□ -0.3
CASC4-205ENST00000558735 PGBD1Q96JS3 809 aa13.18□□□□□ -0.3
CASC4-205ENST00000558735 SAMD11Q96NU1 681 aa13.18□□□□□ -0.3
CASC4-205ENST00000558735 SMARCAD1Q9H4L7 1026 aa13.18□□□□□ -0.3
CASC4-205ENST00000558735 BARHL2Q9NY43 387 aa13.18□□□□□ -0.3
CASC4-205ENST00000558735 DOCK5Q9H7D0 1870 aa13.18□□□□□ -0.3
CASC4-205ENST00000558735 COL4A6Q14031 1691 aa13.18□□□□□ -0.3
CASC4-205ENST00000558735 SIP14410 1827 aa13.18□□□□□ -0.3
CASC4-205ENST00000558735 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.17□□□□□ -0.3
CASC4-205ENST00000558735 GOLGA8AA7E2F4 631 aa13.17□□□□□ -0.3
CASC4-205ENST00000558735 GOLGA8BA8MQT2 603 aa13.17□□□□□ -0.3
CASC4-205ENST00000558735 FOSP01100 380 aaPredicted RBP13.17□□□□□ -0.3
CASC4-205ENST00000558735 AMHP03971 560 aa13.17□□□□□ -0.3
CASC4-205ENST00000558735 HMGB1P09429 215 aaKnown RBP13.17□□□□□ -0.3
CASC4-205ENST00000558735 MARK3P27448 753 aa13.17□□□□□ -0.3
CASC4-205ENST00000558735 SSTR3P32745 418 aaPredicted RBP13.17□□□□□ -0.3
CASC4-205ENST00000558735 PTPROQ16827 1216 aa13.17□□□□□ -0.3
CASC4-205ENST00000558735 TIGD5Q53EQ6 642 aa13.17□□□□□ -0.3
CASC4-205ENST00000558735 TEX2Q8IWB9 1127 aa13.17□□□□□ -0.3
CASC4-205ENST00000558735 MYOCDQ8IZQ8 938 aa13.17□□□□□ -0.3
CASC4-205ENST00000558735 GLG1Q92896 1179 aa13.17□□□□□ -0.3
CASC4-205ENST00000558735 PABPC5Q96DU9 382 aaKnown RBP13.17□□□□□ -0.3
CASC4-205ENST00000558735 EHMT1Q9H9B1 1298 aa13.17□□□□□ -0.3
CASC4-205ENST00000558735 TMEM260Q9NX78 707 aa13.17□□□□□ -0.3
CASC4-205ENST00000558735 ERAP1Q9NZ08 941 aa13.17□□□□□ -0.3
CASC4-205ENST00000558735 MTUS1Q9ULD2 1270 aa13.17□□□□□ -0.3
CASC4-205ENST00000558735 FAM50BQ9Y247 325 aa13.17□□□□□ -0.3
CASC4-205ENST00000558735 SNX14Q9Y5W7 946 aa13.17□□□□□ -0.3
CASC4-205ENST00000558735 MBLAC1A4D2B0 266 aaPredicted RBP13.16□□□□□ -0.3
CASC4-205ENST00000558735 H3BNC9 293 aa13.16□□□□□ -0.3
CASC4-205ENST00000558735 MEIS1O00470 390 aa13.16□□□□□ -0.3
CASC4-205ENST00000558735 ADAMTS3O15072 1205 aa13.16□□□□□ -0.3
CASC4-205ENST00000558735 UPP2O95045 317 aa13.16□□□□□ -0.3
CASC4-205ENST00000558735 INSRRP14616 1297 aa13.16□□□□□ -0.3
CASC4-205ENST00000558735 HSPA4P34932 840 aa13.16□□□□□ -0.3
CASC4-205ENST00000558735 CLK2P49760 499 aaKnown RBP13.16□□□□□ -0.3
CASC4-205ENST00000558735 RCAN1P53805 252 aa13.16□□□□□ -0.3
CASC4-205ENST00000558735 ZP2Q05996 745 aa13.16□□□□□ -0.3
CASC4-205ENST00000558735 APOBRQ0VD83 1088 aa13.16□□□□□ -0.3
CASC4-205ENST00000558735 PPFIA1Q13136 1202 aa13.16□□□□□ -0.3
CASC4-205ENST00000558735 GRIK4Q16099 956 aa13.16□□□□□ -0.3
CASC4-205ENST00000558735 CSPP1Q1MSJ5 1256 aa13.16□□□□□ -0.3
CASC4-205ENST00000558735 CEP55Q53EZ4 464 aa13.16□□□□□ -0.3
CASC4-205ENST00000558735 PPP1R18Q6NYC8 613 aa13.16□□□□□ -0.3
CASC4-205ENST00000558735 Q6ZUG5 572 aa13.16□□□□□ -0.3
CASC4-205ENST00000558735 DNAJB3Q8WWF6 145 aa13.16□□□□□ -0.3
CASC4-205ENST00000558735 FBXL18Q96ME1 805 aa13.16□□□□□ -0.3
CASC4-205ENST00000558735 C17orf80Q9BSJ5 609 aa13.16□□□□□ -0.3
CASC4-205ENST00000558735 ANO3Q9BYT9 981 aa13.16□□□□□ -0.3
CASC4-205ENST00000558735 SLC9A2Q9UBY0 812 aa13.16□□□□□ -0.3
CASC4-205ENST00000558735 C5orf42Q9H799 3197 aa13.16□□□□□ -0.3
CASC4-205ENST00000558735 hCG_1984214I3L0E3 225 aa13.15□□□□□ -0.3
CASC4-205ENST00000558735 NCK2O43639 380 aa13.15□□□□□ -0.3
CASC4-205ENST00000558735 ATG7O95352 703 aa13.15□□□□□ -0.3
CASC4-205ENST00000558735 SREBF1P36956 1147 aa13.15□□□□□ -0.3
CASC4-205ENST00000558735 ADCY7P51828 1080 aa13.15□□□□□ -0.3
CASC4-205ENST00000558735 ACTR2P61160 394 aa13.15□□□□□ -0.3
CASC4-205ENST00000558735 MGAT3Q09327 533 aa13.15□□□□□ -0.3
CASC4-205ENST00000558735 ITGB3BPQ13352 177 aaPredicted RBP13.15□□□□□ -0.3
CASC4-205ENST00000558735 PKN1Q16512 942 aa13.15□□□□□ -0.3
CASC4-205ENST00000558735 PFKFB3Q16875 520 aaPredicted RBP13.15□□□□□ -0.3
CASC4-205ENST00000558735 EPC2Q52LR7 807 aa13.15□□□□□ -0.3
CASC4-205ENST00000558735 TAF2Q6P1X5 1199 aa13.15□□□□□ -0.3
CASC4-205ENST00000558735 ADHFE1Q8IWW8 467 aa13.15□□□□□ -0.3
CASC4-205ENST00000558735 FBXL16Q8N461 479 aa13.15□□□□□ -0.3
CASC4-205ENST00000558735 ZNF713Q8N859 430 aaPredicted RBP13.15□□□□□ -0.3
CASC4-205ENST00000558735 BANK1Q8NDB2 785 aa13.15□□□□□ -0.3
CASC4-205ENST00000558735 ZBTB10Q96DT7 871 aa13.15□□□□□ -0.3
CASC4-205ENST00000558735 CCDC136Q96JN2 1154 aa13.15□□□□□ -0.3
CASC4-205ENST00000558735 JAKMIP1Q96N16 626 aaKnown RBP13.15□□□□□ -0.3
CASC4-205ENST00000558735 IFIH1Q9BYX4 1025 aaKnown RBP13.15□□□□□ -0.3
CASC4-205ENST00000558735 AGO4Q9HCK5 861 aaKnown RBP13.15□□□□□ -0.3
CASC4-205ENST00000558735 JPH1Q9HDC5 661 aaPredicted RBP13.15□□□□□ -0.3
CASC4-205ENST00000558735 NAP1L2Q9ULW6 460 aaPredicted RBP13.15□□□□□ -0.3
CASC4-205ENST00000558735 NFASCO94856 1347 aa13.14□□□□□ -0.31
CASC4-205ENST00000558735 RRN3P2A6NIE6 340 aa13.14□□□□□ -0.31
CASC4-205ENST00000558735 ENPP3O14638 875 aa13.14□□□□□ -0.31
CASC4-205ENST00000558735 IGBP1P78318 339 aa13.14□□□□□ -0.31
CASC4-205ENST00000558735 FGD1P98174 961 aa13.14□□□□□ -0.31
CASC4-205ENST00000558735 LPIN1Q14693 890 aa13.14□□□□□ -0.31
CASC4-205ENST00000558735 PLCB4Q15147 1175 aa13.14□□□□□ -0.31
CASC4-205ENST00000558735 JAKMIP3Q5VZ66 844 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms