RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 BFSP2Q13515 415 aa11.65□□□□□ -0.55
TPM1-212ENST00000558347 ATL3Q6DD88 541 aa11.65□□□□□ -0.55
TPM1-212ENST00000558347 PPP1R18Q6NYC8 613 aa11.65□□□□□ -0.55
TPM1-212ENST00000558347 RBM43Q6ZSC3 357 aaKnown RBP11.65□□□□□ -0.55
TPM1-212ENST00000558347 NLRX1Q86UT6 975 aa11.65□□□□□ -0.55
TPM1-212ENST00000558347 RETREG2Q8NC44 543 aa11.65□□□□□ -0.55
TPM1-212ENST00000558347 FBXO18Q8NFZ0 1043 aa11.65□□□□□ -0.55
TPM1-212ENST00000558347 WNT8BQ93098 351 aa11.65□□□□□ -0.55
TPM1-212ENST00000558347 GPRASP2Q96D09 838 aa11.65□□□□□ -0.55
TPM1-212ENST00000558347 PGBD1Q96JS3 809 aa11.65□□□□□ -0.55
TPM1-212ENST00000558347 SENP7Q9BQF6 1050 aa11.65□□□□□ -0.55
TPM1-212ENST00000558347 NUP62CLQ9H1M0 184 aa11.65□□□□□ -0.55
TPM1-212ENST00000558347 RIC8AQ9NPQ8 531 aa11.65□□□□□ -0.55
TPM1-212ENST00000558347 BARHL2Q9NY43 387 aa11.65□□□□□ -0.55
TPM1-212ENST00000558347 UBIAD1Q9Y5Z9 338 aa11.65□□□□□ -0.55
TPM1-212ENST00000558347 PRUNE2Q8WUY3 3088 aa11.64□□□□□ -0.55
TPM1-212ENST00000558347 TMEM265A0A087WTH1 108 aa11.64□□□□□ -0.55
TPM1-212ENST00000558347 H3BQV1 296 aa11.64□□□□□ -0.55
TPM1-212ENST00000558347 H3BRB1 525 aa11.64□□□□□ -0.55
TPM1-212ENST00000558347 NOP56O00567 594 aaKnown RBP11.64□□□□□ -0.55
TPM1-212ENST00000558347 CAVIN2O95810 425 aa11.64□□□□□ -0.55
TPM1-212ENST00000558347 KCNA2P16389 499 aa11.64□□□□□ -0.55
TPM1-212ENST00000558347 AKAP17AQ02040 695 aaKnown RBP11.64□□□□□ -0.55
TPM1-212ENST00000558347 SP4Q02446 784 aa11.64□□□□□ -0.55
TPM1-212ENST00000558347 RESTQ13127 1097 aa11.64□□□□□ -0.55
TPM1-212ENST00000558347 GPNMBQ14956 572 aa11.64□□□□□ -0.55
TPM1-212ENST00000558347 TRIM50Q86XT4 487 aa11.64□□□□□ -0.55
TPM1-212ENST00000558347 TET1Q8NFU7 2136 aa11.64□□□□□ -0.55
TPM1-212ENST00000558347 CAGE1Q8TC20 777 aa11.64□□□□□ -0.55
TPM1-212ENST00000558347 TIFAQ96CG3 184 aa11.64□□□□□ -0.55
TPM1-212ENST00000558347 C8orf76Q96K31 380 aa11.64□□□□□ -0.55
TPM1-212ENST00000558347 MTIF3Q9H2K0 278 aaKnown RBP11.64□□□□□ -0.55
TPM1-212ENST00000558347 TUT1Q9H6E5 874 aaKnown RBP11.64□□□□□ -0.55
TPM1-212ENST00000558347 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.64□□□□□ -0.55
TPM1-212ENST00000558347 A0A0C4DFX4 3053 aa11.64□□□□□ -0.55
TPM1-212ENST00000558347 SPTBN5Q9NRC6 3674 aaKnown RBP11.63□□□□□ -0.55
TPM1-212ENST00000558347 SMCO2A6NFE2 343 aa11.63□□□□□ -0.55
TPM1-212ENST00000558347 ZBBXA8MT70 800 aa11.63□□□□□ -0.55
TPM1-212ENST00000558347 hCG_1984214I3L0E3 225 aa11.63□□□□□ -0.55
TPM1-212ENST00000558347 PPFIA3O75145 1194 aa11.63□□□□□ -0.55
TPM1-212ENST00000558347 PFKMP08237 780 aa11.63□□□□□ -0.55
TPM1-212ENST00000558347 CKBP12277 381 aa11.63□□□□□ -0.55
TPM1-212ENST00000558347 RFC2P35250 354 aa11.63□□□□□ -0.55
TPM1-212ENST00000558347 CLK2P49760 499 aaKnown RBP11.63□□□□□ -0.55
TPM1-212ENST00000558347 ADCY7P51828 1080 aa11.63□□□□□ -0.55
TPM1-212ENST00000558347 RBL2Q08999 1139 aa11.63□□□□□ -0.55
TPM1-212ENST00000558347 PTK7Q13308 1070 aa11.63□□□□□ -0.55
TPM1-212ENST00000558347 PKN1Q16512 942 aa11.63□□□□□ -0.55
TPM1-212ENST00000558347 PFKFB3Q16875 520 aaPredicted RBP11.63□□□□□ -0.55
TPM1-212ENST00000558347 TRIM71Q2Q1W2 868 aaKnown RBP11.63□□□□□ -0.55
TPM1-212ENST00000558347 SASS6Q6UVJ0 657 aa11.63□□□□□ -0.55
TPM1-212ENST00000558347 FAM177A1Q8N128 213 aaPredicted RBP11.63□□□□□ -0.55
TPM1-212ENST00000558347 CCDC155Q8N6L0 562 aa11.63□□□□□ -0.55
TPM1-212ENST00000558347 ZNF713Q8N859 430 aaPredicted RBP11.63□□□□□ -0.55
TPM1-212ENST00000558347 FAM200AQ8TCP9 573 aa11.63□□□□□ -0.55
TPM1-212ENST00000558347 AFAP1L1Q8TED9 768 aa11.63□□□□□ -0.55
TPM1-212ENST00000558347 LEO1Q8WVC0 666 aaPredicted RBP11.63□□□□□ -0.55
TPM1-212ENST00000558347 MYLIPQ8WY64 445 aa11.63□□□□□ -0.55
TPM1-212ENST00000558347 SPATA32Q96LK8 384 aa11.63□□□□□ -0.55
TPM1-212ENST00000558347 ZNF576Q9H609 170 aa11.63□□□□□ -0.55
TPM1-212ENST00000558347 TMEM260Q9NX78 707 aa11.63□□□□□ -0.55
TPM1-212ENST00000558347 PKD2L1Q9P0L9 805 aa11.63□□□□□ -0.55
TPM1-212ENST00000558347 CFAP45Q9UL16 551 aa11.63□□□□□ -0.55
TPM1-212ENST00000558347 GOLGA6L4A6NEF3 574 aa11.62□□□□□ -0.55
TPM1-212ENST00000558347 GOLGA6L6A8MZA4 724 aa11.62□□□□□ -0.55
TPM1-212ENST00000558347 ADAMTS3O15072 1205 aa11.62□□□□□ -0.55
TPM1-212ENST00000558347 SMIM10L2AP0DMW4 78 aa11.62□□□□□ -0.55
TPM1-212ENST00000558347 SMIM10L2BP0DMW5 78 aa11.62□□□□□ -0.55
TPM1-212ENST00000558347 SCG2P13521 617 aa11.62□□□□□ -0.55
TPM1-212ENST00000558347 SELPP16109 830 aa11.62□□□□□ -0.55
TPM1-212ENST00000558347 HOXC8P31273 242 aa11.62□□□□□ -0.55
TPM1-212ENST00000558347 RABGGTBP53611 331 aa11.62□□□□□ -0.55
TPM1-212ENST00000558347 MTMR1Q13613 665 aa11.62□□□□□ -0.55
TPM1-212ENST00000558347 GRIN2CQ14957 1233 aa11.62□□□□□ -0.55
TPM1-212ENST00000558347 UTP14CQ5TAP6 766 aaKnown RBP11.62□□□□□ -0.55
TPM1-212ENST00000558347 TRAF7Q6Q0C0 670 aa11.62□□□□□ -0.55
TPM1-212ENST00000558347 LRRC8DQ7L1W4 858 aa11.62□□□□□ -0.55
TPM1-212ENST00000558347 CYP2W1Q8TAV3 490 aa11.62□□□□□ -0.55
TPM1-212ENST00000558347 CDHR1Q96JP9 859 aa11.62□□□□□ -0.55
TPM1-212ENST00000558347 MAP7D2Q96T17 732 aa11.62□□□□□ -0.55
TPM1-212ENST00000558347 ANO3Q9BYT9 981 aa11.62□□□□□ -0.55
TPM1-212ENST00000558347 RNPEPQ9H4A4 650 aa11.62□□□□□ -0.55
TPM1-212ENST00000558347 CLSTN2Q9H4D0 955 aa11.62□□□□□ -0.55
TPM1-212ENST00000558347 EHMT1Q9H9B1 1298 aa11.62□□□□□ -0.55
TPM1-212ENST00000558347 JADE2Q9NQC1 790 aa11.62□□□□□ -0.55
TPM1-212ENST00000558347 YBX2Q9Y2T7 364 aaKnown RBP11.62□□□□□ -0.55
TPM1-212ENST00000558347 SLC4A7Q9Y6M7 1214 aa11.62□□□□□ -0.55
TPM1-212ENST00000558347 PTPRSQ13332 1948 aa11.62□□□□□ -0.55
TPM1-212ENST00000558347 C17orf102A2RUQ5 167 aa11.61□□□□□ -0.55
TPM1-212ENST00000558347 NBNO60934 754 aa11.61□□□□□ -0.55
TPM1-212ENST00000558347 XBP1P17861 261 aa11.61□□□□□ -0.55
TPM1-212ENST00000558347 TCF7P36402 384 aaPredicted RBP11.61□□□□□ -0.55
TPM1-212ENST00000558347 TRIM29Q14134 588 aa11.61□□□□□ -0.55
TPM1-212ENST00000558347 HSP90AA2PQ14568 343 aaPredicted RBP11.61□□□□□ -0.55
TPM1-212ENST00000558347 ZNF618Q5T7W0 954 aa11.61□□□□□ -0.55
TPM1-212ENST00000558347 KRT40Q6A162 431 aa11.61□□□□□ -0.55
TPM1-212ENST00000558347 GIMAP8Q8ND71 665 aaPredicted RBP11.61□□□□□ -0.55
TPM1-212ENST00000558347 ATP6V0A1Q93050 837 aa11.61□□□□□ -0.55
TPM1-212ENST00000558347 AIFM3Q96NN9 605 aa11.61□□□□□ -0.55
TPM1-212ENST00000558347 MXRA8Q9BRK3 442 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms